BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	979,388	T→C	R1280R (CGT→CGC)	mukB →	MukB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	979,388	0	T	C	100.0%	863.7 / NA	265	R1280R (CGT→CGC)	mukB	MukB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/142); total (123/142)

Only 100 of 286 total aligned reads displayed.

GAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979299‑979477

 aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTGAACGTGAACGTGCGCGaaa                                                                                       <  1:2487697/93‑1 (MQ=255)

 aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  2:6422170/93‑1 (MQ=255)

 aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       >  2:5558771/1‑93 (MQ=255)

 aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  1:2097660/93‑1 (MQ=255)

 aGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGaaa                                                                                       <  1:4747776/93‑1 (MQ=255)

  gCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAac                                                                                      >  2:1669648/1‑93 (MQ=255)

     gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgca                                                                                   >  2:6005001/1‑93 (MQ=255)

     gAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgca                                                                                   >  1:6167693/1‑93 (MQ=255)

     gAACCGTATCCCTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACACCGTGCGTCTCAACGTGAACTTGCGCGACacgcc                                                                                   >  2:1625643/1‑92 (MQ=255)

      aaCCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcac                                                                                  <  1:5063460/93‑1 (MQ=255)

        ccgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAacgcacgc                                                                                <  2:1211204/93‑1 (MQ=255)

         cgtatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGcc                                                                               <  1:5158531/93‑1 (MQ=255)

           tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             <  1:4194154/93‑1 (MQ=255)

           tatccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCAt                                                                             <  1:5276873/93‑1 (MQ=255)

              ccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCt                                                                          <  2:3660021/93‑1 (MQ=255)

              ccgtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCt                                                                          <  2:538444/93‑1 (MQ=255)

                gtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTAc                                                                        <  2:131216/93‑1 (MQ=255)

                gtatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTAc                                                                        <  2:4191379/93‑1 (MQ=255)

                 tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       >  2:2973902/1‑93 (MQ=255)

                 tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       <  2:150575/93‑1 (MQ=255)

                 tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       >  1:3406105/1‑93 (MQ=255)

                 tatGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACt                                                                       >  2:5511964/1‑93 (MQ=255)

                  atGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTg                                                                      <  2:2982750/93‑1 (MQ=255)

                   tGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTgg                                                                     >  1:1137153/1‑93 (MQ=255)

                    gCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGa                                                                    <  1:495470/93‑1 (MQ=255)

                     cTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAt                                                                   <  2:2581483/93‑1 (MQ=255)

                       cAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGAtgt                                                                 <  2:1087828/93‑1 (MQ=255)

                         aCCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGc                                                               <  1:5374951/93‑1 (MQ=255)

                           cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             >  2:2263388/1‑93 (MQ=255)

                           cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             >  1:3785455/1‑93 (MQ=255)

                           cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             >  2:4569429/1‑93 (MQ=255)

                           cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             <  1:3939020/93‑1 (MQ=255)

                           cAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctc                                                             >  1:1014951/1‑93 (MQ=255)

                            aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            >  1:986438/1‑93 (MQ=255)

                            aGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctct                                                            >  2:3423071/1‑93 (MQ=255)

                             ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           <  2:1810630/93‑1 (MQ=255)

                             ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           >  2:4150818/1‑93 (MQ=255)

                             ggggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctc                                                           >  1:5962948/1‑93 (MQ=255)

                              gggTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGctctct                                                          >  2:6365681/1‑93 (MQ=255)

                                 ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       >  2:2862292/1‑93 (MQ=255)

                                 ttGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       <  1:2836201/93‑1 (MQ=255)

                                 gtGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGaa                                                       <  1:2727670/92‑1 (MQ=255)

                                   gCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACa                                                     <  1:4338295/93‑1 (MQ=255)

                                    cAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAg                                                    <  1:589513/93‑1 (MQ=255)

                                     aGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGc                                                   >  1:3127881/1‑93 (MQ=255)

                                      gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  >  2:3831685/1‑93 (MQ=255)

                                      gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  <  2:6600587/93‑1 (MQ=255)

                                      gAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCa                                                  >  2:598178/1‑93 (MQ=255)

                                       aaCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCAc                                                 >  1:647770/1‑93 (MQ=255)

                                       aaCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCAc                                                 <  2:5460469/93‑1 (MQ=255)

                                        aCGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACg                                                >  1:3002012/1‑93 (MQ=255)

                                         cGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAATCGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGa                                               <  1:5435306/93‑1 (MQ=255)

                                         cGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGa                                               >  2:1479370/1‑93 (MQ=255)

                                            aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            >  1:6302909/1‑93 (MQ=255)

                                            aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            <  1:2910372/93‑1 (MQ=255)

                                            aTCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagca                                            <  2:5753586/93‑1 (MQ=255)

                                             tCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGAGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGagcag                                           >  2:4698667/1‑93 (MQ=255)

                                                  tGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCa                                      <  2:1942950/93‑1 (MQ=255)

                                                    gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    <  2:5965475/93‑1 (MQ=255)

                                                    gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    >  1:6065273/1‑93 (MQ=255)

                                                    gTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAgg                                    <  1:2306161/93‑1 (MQ=255)

                                                     tCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGa                                   <  1:4423223/93‑1 (MQ=255)

                                                     tCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGa                                   <  1:5520013/93‑1 (MQ=255)

                                                     gcAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGa                                   <  2:5224947/92‑1 (MQ=255)

                                                        ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                <  2:5016090/93‑1 (MQ=255)

                                                        ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                >  1:3865030/1‑93 (MQ=255)

                                                        ggTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCt                                >  1:4557820/1‑93 (MQ=255)

                                                         gTGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTg                               <  1:4080908/93‑1 (MQ=255)

                                                          tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              <  1:2628360/93‑1 (MQ=255)

                                                          tGAACAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGt                              <  2:4763519/93‑1 (MQ=255)

                                                           gAACACCGTTCGTCTCAACGTAAACGTGCGCGAAGCGCACGCGATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGtt                             <  1:3524140/93‑1 (MQ=255)

                                                            aaCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGttt                            <  2:6686584/93‑1 (MQ=255)

                                                             aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTa                           >  2:754381/1‑93 (MQ=255)

                                                             aCAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTa                           >  1:1903461/1‑93 (MQ=255)

                                                              cAGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTaa                          <  1:6491660/93‑1 (MQ=255)

                                                               aGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAAc                         <  2:5091332/93‑1 (MQ=255)

                                                               aGCGTGCGTCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAAc                         <  1:332067/93‑1 (MQ=255)

                                                                gcgtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACa                        >  2:3939000/1‑93 (MQ=255)

                                                                gcgtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACa                        >  2:5257845/1‑93 (MQ=255)

                                                                  gtgcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGc                      <  2:2340810/93‑1 (MQ=255)

                                                                    gcgtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCaa                    >  2:1892112/1‑93 (MQ=255)

                                                                      gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcc                  <  2:4850802/93‑1 (MQ=255)

                                                                      gtCTCAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAAcc                  >  2:5792864/1‑93 (MQ=255)

                                                                       tctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCg                 >  2:3227382/1‑93 (MQ=255)

                                                                        ctcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGt                <  1:1355634/93‑1 (MQ=255)

                                                                         tcAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGtt               <  1:5600397/93‑1 (MQ=255)

                                                                         taaacgtgaacgtgCGCGAACCTCACGCCATGCTACTGGATGTGCTCACTGAACAGCAAGATCACCATCAGGATCTGTTTAACAGCAACCGtt               <  1:2387944/91‑1 (MQ=255)

                                                                          cAACGTGAACGTGCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGttt              <  1:4838960/93‑1 (MQ=255)

                                                                            acgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGa            >  2:919791/1‑93 (MQ=255)

                                                                            acgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGa            >  2:2742368/1‑93 (MQ=255)

                                                                             cgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGAc           <  2:4567469/93‑1 (MQ=255)

                                                                             cgtgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGAc           <  1:4039712/93‑1 (MQ=255)

                                                                             cgtgaacgtgCGCCAAACGCACGCCATGCTACTGGATGTGCGCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGAc           <  2:246706/93‑1 (MQ=255)

                                                                               tgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCt         <  1:2209617/93‑1 (MQ=255)

                                                                               tgaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCt         <  1:1635736/93‑1 (MQ=255)

                                                                                gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        >  2:1716161/1‑93 (MQ=255)

                                                                                gaacgtgCGCGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCtt        <  1:3592298/93‑1 (MQ=255)

                                                                                    gtgcgcgAAAGGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    <  1:701799/93‑1 (MQ=255)

                                                                                    gtgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCg    <  1:657839/93‑1 (MQ=255)

                                                                                     tgcgcgAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCgg   >  1:3730314/1‑93 (MQ=255)

GAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGA  >  NC_000913/979299‑979477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`