BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	998,433	A→G	intergenic (+19/‑6)	ycbR → / → ycbS	putative chaperone/putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	998,433	0	A	G	100.0%	492.3 / NA	154	intergenic (+19/‑6)	ycbR/ycbS	putative chaperone/putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/54); total (100/54)

Only 100 of 163 total aligned reads displayed.

AATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCG  >  NC_000913/998343‑998522

aaTAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGc                                                                                         >  1:1160779/1‑93 (MQ=255)

aaTAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGc                                                                                         >  1:4286484/1‑93 (MQ=255)

 aTAGCACCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCg                                                                                        <  1:386080/93‑1 (MQ=255)

  tAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCga                                                                                       <  1:5602495/93‑1 (MQ=255)

    gcagcGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCgaga                                                                                     <  2:5236432/93‑1 (MQ=255)

    gaagcGTAACGTATCGAACTATCAATGTATACGGGACGTAAACACCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCgaga                                                                                     <  1:4723945/91‑1 (MQ=255)

       gcGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGt                                                                                  >  1:5607908/1‑93 (MQ=255)

        cGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGta                                                                                 <  1:1993656/93‑1 (MQ=255)

           aaCGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAg                                                                              >  2:4042055/1‑93 (MQ=255)

            aCGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGa                                                                             >  2:1552912/1‑93 (MQ=255)

               tATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTATGCCGTCTTCAGCTTGGAGGACGAGATGTATAGAACt                                                                          >  2:2241098/1‑93 (MQ=255)

                aTCGAACCATCAATGACTACGGGGCGGAACCGCCGCAACTCAACTGTAAATCGTAATCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTc                                                                         <  1:781555/93‑1 (MQ=255)

                aTCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTc                                                                         >  2:183436/1‑93 (MQ=255)

                aTCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTc                                                                         >  2:3987717/1‑93 (MQ=255)

                 tCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCa                                                                        <  1:5891283/93‑1 (MQ=255)

                 tCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCa                                                                        >  2:387817/1‑93 (MQ=255)

                  cGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCAt                                                                       <  1:5868036/93‑1 (MQ=255)

                    aaCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCg                                                                     >  1:4792418/1‑93 (MQ=255)

                     aCCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGa                                                                    <  1:4982513/93‑1 (MQ=255)

                      ccATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCTGCTAAGAGGGCGAGATGTATAGAACTCATCGac                                                                   >  2:3594029/1‑93 (MQ=255)

                      ccATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGACCTCATCGac                                                                   >  1:3039424/1‑93 (MQ=255)

                        aTCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGacaa                                                                 <  2:689235/93‑1 (MQ=255)

                        aTCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGacaa                                                                 >  1:6672761/1‑93 (MQ=255)

                         tCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGacaac                                                                >  1:3598644/1‑93 (MQ=255)

                         tCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGacaac                                                                >  2:2751557/1‑93 (MQ=255)

                          cAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGCTAAGAGGGCGAGATGTATAGAACTCATCGacaaga                                                               >  1:3699476/1‑91 (MQ=255)

                           aaTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAacac                                                              >  1:4707324/1‑93 (MQ=255)

                            attaCTAGGGGCCGCAAACGCCGCAGCTCAACTGTAAATAGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCAGCGACAAcaca                                                             <  1:419848/90‑1 (MQ=255)

                            aTGCCTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca                                                             <  2:1197203/93‑1 (MQ=255)

                            aTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca                                                             >  1:142274/1‑93 (MQ=255)

                            aTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca                                                             >  2:6061130/1‑93 (MQ=255)

                            aTGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca                                                             >  1:22377/1‑93 (MQ=255)

                            aTGACTACGGGGCAGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAAcaca                                                             <  2:5633898/93‑1 (MQ=255)

                              gACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGc                                                           <  2:1977775/93‑1 (MQ=255)

                                ttACGTGGCGACAGCGCCGCAACACATCTGTAAATCATAAGCTGTCTTCACTGAAGAGGGAGAGATGTATAGAACTCATCGACAACACAGCCt                                                         <  1:2798340/92‑1 (MQ=255)

                                cTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCt                                                         <  2:2988243/93‑1 (MQ=255)

                                 tACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTTATCGACAACACAGCCTg                                                        <  2:3915359/93‑1 (MQ=255)

                                  ggggggggAAAACCCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGt                                                       <  1:5281839/91‑1 (MQ=255)

                                  aCGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGt                                                       <  2:4313500/93‑1 (MQ=255)

                                  aCGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGt                                                       >  2:2606785/1‑93 (MQ=255)

                                   cGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGtt                                                      <  2:3047002/93‑1 (MQ=255)

                                     gggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTaa                                                    >  1:1022771/1‑93 (MQ=255)

                                      ggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAg                                                   >  1:3269986/1‑93 (MQ=255)

                                      ggCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAg                                                   >  2:6210895/1‑93 (MQ=255)

                                        cGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGct                                                 <  1:543887/93‑1 (MQ=255)

                                         ggAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctc                                                >  1:4840061/1‑93 (MQ=255)

                                          gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct                                               >  2:5683510/1‑93 (MQ=255)

                                          gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct                                               <  1:397840/93‑1 (MQ=255)

                                          gAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGctct                                               >  2:664447/1‑93 (MQ=255)

                                           aaaCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtg                                              <  2:1774378/93‑1 (MQ=255)

                                            aaCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtgg                                             >  2:3079083/1‑93 (MQ=255)

                                             aCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggt                                            >  2:4347958/1‑93 (MQ=255)

                                             aCGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggt                                            >  2:4543957/1‑93 (MQ=255)

                                               gccgcAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCtggtgg                                          >  1:2739653/1‑93 (MQ=255)

                                                    aactcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGc                                     >  2:2974263/1‑93 (MQ=255)

                                                    aactcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGc                                     >  2:510064/1‑93 (MQ=255)

                                                     actcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGcc                                    >  2:3281260/1‑93 (MQ=255)

                                                       tcaactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCAt                                  >  2:5335985/1‑93 (MQ=255)

                                                        caactGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATc                                 >  2:2000301/1‑93 (MQ=255)

                                                          actGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGt                               >  1:3950095/1‑93 (MQ=255)

                                                            tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt                             >  2:1850954/1‑93 (MQ=255)

                                                            tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt                             >  1:4646300/1‑93 (MQ=255)

                                                            tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt                             >  1:1722135/1‑93 (MQ=255)

                                                            tGTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGttt                             >  2:4473980/1‑93 (MQ=255)

                                                             gTAAATCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTa                            >  1:5561491/1‑93 (MQ=255)

                                                               aaaTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTAtt                          >  2:5642158/1‑93 (MQ=255)

                                                               aaaTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTAtt                          <  1:1883351/93‑1 (MQ=255)

                                                               aaaTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTAtt                          <  2:1065573/93‑1 (MQ=255)

                                                                 aTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtgg                        >  2:694310/1‑93 (MQ=255)

                                                                 aTCGTAAGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATtgg                        >  2:4162549/1‑93 (MQ=255)

                                                                      aaGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGc                   >  1:3979771/1‑93 (MQ=255)

                                                                      aaGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGc                   >  1:3496198/1‑93 (MQ=255)

                                                                      aaGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGc                   >  1:5763724/1‑93 (MQ=255)

                                                                      aaGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGc                   >  2:6112770/1‑93 (MQ=255)

                                                                      aaGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGc                   >  2:2655656/1‑93 (MQ=255)

                                                                       aGCCGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCt                  >  2:3599149/1‑93 (MQ=255)

                                                                          cGTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggt               >  2:117603/1‑93 (MQ=255)

                                                                          cGTCTTCAGTGAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggt               <  1:5969819/93‑1 (MQ=255)

                                                                           gTCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtg              <  2:5384439/93‑1 (MQ=255)

                                                                            tCTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtgg             >  2:4015228/1‑93 (MQ=255)

                                                                             cTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTggtggt            <  1:2624300/93‑1 (MQ=255)

                                                                             cTTCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTggtggt            <  1:6590466/93‑1 (MQ=255)

                                                                              ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCtggtgggg           >  1:1666337/1‑91 (MQ=255)

                                                                              ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGgtggtg           >  2:2376092/1‑93 (MQ=255)

                                                                              ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGgtggtg           >  2:3414782/1‑93 (MQ=255)

                                                                              ttCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGgtggtg           <  2:3443669/93‑1 (MQ=255)

                                                                               tCAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGgtgt          >  2:4347577/1‑93 (MQ=255)

                                                                                cAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGtt         >  1:1245997/1‑93 (MQ=255)

                                                                                cAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGtt         >  1:3623130/1‑93 (MQ=255)

                                                                                cAGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGtt         >  1:4114588/1‑93 (MQ=255)

                                                                                 aGTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGttt        >  1:70066/1‑93 (MQ=255)

                                                                                  gTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtg       >  1:1086206/1‑93 (MQ=255)

                                                                                  gTTAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtg       >  1:4073294/1‑93 (MQ=255)

                                                                                   ttAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtgt      <  2:4728862/93‑1 (MQ=255)

                                                                                    tAAGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTtgtg     <  2:3658707/93‑1 (MQ=255)

                                                                                     aaGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTgtgt    <  1:4640055/93‑1 (MQ=255)

                                                                                     aaGAGGGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTgtgt    >  2:3186217/1‑93 (MQ=255)

                                                                                       gagggCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCg  <  2:529805/93‑1 (MQ=255)

                                                                                       gagggCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCg  >  2:2193083/1‑93 (MQ=255)

                                                                                       gagggCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCg  >  2:3705726/1‑93 (MQ=255)

AATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAAGCCGTCTTCAGTTAAGAGAGCGAGATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCG  >  NC_000913/998343‑998522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`