BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,019,162	A→G	Y39H (TAC→CAC)	ompA ←	outer membrane protein 3a

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,019,162	0	A	G	100.0%	467.5 / NA	141	Y39H (TAC→CAC)	ompA	outer membrane protein 3a
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/41); total (100/41)

Only 100 of 142 total aligned reads displayed.

ACGGGTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTACTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCACTG  >  NC_000913/1019072‑1019251

aCGGGTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCt                                                                                         >  1:3335162/1‑93 (MQ=255)

aCGGGTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCt                                                                                         >  1:6119483/1‑93 (MQ=255)

   ggTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTggg                                                                                      <  1:3190326/93‑1 (MQ=255)

   ggTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTggg                                                                                      >  1:4235536/1‑93 (MQ=255)

   ggTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTggg                                                                                      >  1:5870411/1‑93 (MQ=255)

    gTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGa                                                                                     >  1:2131053/1‑93 (MQ=255)

       aaCCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCa                                                                                  <  2:5971726/93‑1 (MQ=255)

       aaCCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCa                                                                                  <  1:70249/93‑1 (MQ=255)

        aCCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAg                                                                                 >  1:1422393/1‑93 (MQ=255)

          cTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGcc                                                                               >  2:5990611/1‑93 (MQ=255)

          cTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTAATGAAACCAGTGTCATGGTGCTGGGACCAGcc                                                                               <  2:4201009/93‑1 (MQ=255)

           tGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGccc                                                                              >  1:2945054/1‑93 (MQ=255)

           tGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGccc                                                                              >  1:3810365/1‑93 (MQ=255)

            ggTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCa                                                                             >  2:4709043/1‑93 (MQ=255)

            ggTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCa                                                                             >  2:5109176/1‑93 (MQ=255)

             gTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAg                                                                            <  1:2233884/93‑1 (MQ=255)

              tAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGt                                                                           >  1:1106048/1‑93 (MQ=255)

                accaccAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGttt                                                                         >  2:805368/1‑93 (MQ=255)

                accaccAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGttt                                                                         >  1:5269125/1‑93 (MQ=255)

                 ccaccaAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTa                                                                        >  1:4327345/1‑93 (MQ=255)

                   accaAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGc                                                                      >  2:5670683/1‑93 (MQ=255)

                   accaAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGc                                                                      >  1:6420003/1‑93 (MQ=255)

                    ccaAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCa                                                                     >  2:5266589/1‑93 (MQ=255)

                      aaaaGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCAcc                                                                   >  1:2838252/1‑93 (MQ=255)

                       aaaGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCa                                                                  >  2:2537440/1‑93 (MQ=255)

                         aGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAgt                                                                <  1:96879/93‑1 (MQ=255)

                          gCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAgtg                                                               >  1:727501/1‑93 (MQ=255)

                           cACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAgtgt                                                              <  1:1075992/93‑1 (MQ=255)

                            aCCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTa                                                             >  2:4978645/1‑93 (MQ=255)

                            aCCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTa                                                             <  2:4358381/93‑1 (MQ=255)

                             ccAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTAc                                                            >  1:1622436/1‑93 (MQ=255)

                             ccAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTAc                                                            >  2:3834095/1‑93 (MQ=255)

                             ccAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTAc                                                            >  2:5477995/1‑93 (MQ=255)

                              cAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTAcc                                                           <  2:2999380/93‑1 (MQ=255)

                                 cgcCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCATCAGTGTACCAgg                                                        >  2:3943299/1‑93 (MQ=255)

                                 cgcCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAgg                                                        <  2:6733500/93‑1 (MQ=255)

                                   cccAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGgtg                                                      >  1:856723/1‑93 (MQ=255)

                                   cccAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGgtg                                                      <  2:2354465/93‑1 (MQ=255)

                                   cccAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGgtg                                                      >  2:5852765/1‑93 (MQ=255)

                                   cccAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGgtg                                                      <  1:664253/93‑1 (MQ=255)

                                   cccAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGgtg                                                      >  1:2161169/1‑93 (MQ=255)

                                     cAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGtt                                                    <  2:394185/93‑1 (MQ=255)

                                      aGTTGGTTTTCATGGGTCGGGCCGTTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTa                                                   <  1:4593035/93‑1 (MQ=255)

                                       gTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGatat                                                  >  2:397240/1‑93 (MQ=255)

                                       gTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTAt                                                  >  1:5552460/1‑93 (MQ=255)

                                       gTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTAt                                                  >  1:4464968/1‑93 (MQ=255)

                                       gTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTAt                                                  >  2:4316473/1‑93 (MQ=255)

                                       gTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGCACCAGGTGTTAt                                                  >  1:2304109/1‑93 (MQ=255)

                                        ttGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATc                                                 <  1:829163/93‑1 (MQ=255)

                                         tGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCt                                                <  1:5567852/93‑1 (MQ=255)

                                         tGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCt                                                >  2:4904779/1‑93 (MQ=255)

                                           gTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCttt                                              >  2:172027/1‑93 (MQ=255)

                                             tttCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCg                                            <  2:5990327/93‑1 (MQ=255)

                                              ttCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCgg                                           >  2:4266521/1‑93 (MQ=255)

                                               tCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGa                                          >  2:208888/1‑93 (MQ=255)

                                               tCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGa                                          >  2:4818990/1‑93 (MQ=255)

                                               tCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGa                                          <  1:6661716/93‑1 (MQ=255)

                                                 ttGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGc                                        <  2:5534299/92‑1 (MQ=255)

                                                  tGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCg                                       >  2:585650/1‑93 (MQ=255)

                                                  tGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCg                                       >  2:2917739/1‑93 (MQ=255)

                                                    ggTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGc                                     >  2:3856024/1‑93 (MQ=255)

                                                     gTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGcc                                    >  1:6507312/1‑93 (MQ=255)

                                                     gTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGcc                                    >  1:2514356/1‑93 (MQ=255)

                                                     gTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGcc                                    >  2:4157106/1‑93 (MQ=255)

                                                     gTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGcc                                    >  2:44067/1‑93 (MQ=255)

                                                      tCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCt                                   <  1:2760206/93‑1 (MQ=255)

                                                      tCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCt                                   <  1:625060/93‑1 (MQ=255)

                                                       cGGGCCATTGTTGTTGATGAAACCAGTGTCATGGAGCTGGGACCAGCCCAGGTTAGCACCAGTGTACCAGGGGTGATCGGTCGGAGCGGCCTg                                  >  2:6724660/1‑93 (MQ=255)

                                                         ggCCATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTgcg                                >  1:5311414/1‑93 (MQ=255)

                                                           ccATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCt                              >  2:2903984/1‑93 (MQ=255)

                                                           ccATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCt                              >  2:1572598/1‑93 (MQ=255)

                                                           ccATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCt                              <  2:5785699/93‑1 (MQ=255)

                                                            cATTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTa                             >  2:458898/1‑93 (MQ=255)

                                                             aTTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTAc                            >  1:2083865/1‑93 (MQ=255)

                                                             aTTGTTGTTGATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTCCGCTAc                            >  1:4755956/1‑93 (MQ=255)

                                                                 ttgttgATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTa                        <  2:2746342/93‑1 (MQ=255)

                                                                  tgttgATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAg                       >  1:1748435/1‑93 (MQ=255)

                                                                    ttgATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCg                     >  2:2491950/1‑93 (MQ=255)

                                                                    ttgATGAAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGCGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGGAGCg                     >  2:6189089/1‑93 (MQ=255)

                                                                      gatgaAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGaa                   >  1:3026841/1‑93 (MQ=255)

                                                                      gatgaAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGaa                   >  1:5601076/1‑93 (MQ=255)

                                                                       atgaAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGaaa                  >  1:5486321/1‑93 (MQ=255)

                                                                         gaAACCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAcc                <  1:2376160/93‑1 (MQ=255)

                                                                          aaaCCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAcca               <  2:376392/93‑1 (MQ=255)

                                                                           aaCCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccag              >  2:3322384/1‑93 (MQ=255)

                                                                           aaCCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccag              >  2:3195280/1‑93 (MQ=255)

                                                                           aaCCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccag              >  1:6245799/1‑93 (MQ=255)

                                                                            aCCAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccagc             >  1:958304/1‑93 (MQ=255)

                                                                              cAGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccagcca           <  2:4059741/93‑1 (MQ=255)

                                                                               aGTGTCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAAccagccag          >  1:6683584/1‑93 (MQ=255)

                                                                                gtgtCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGt         >  2:4452215/1‑93 (MQ=255)

                                                                                gtgtCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGt         <  2:1250964/93‑1 (MQ=255)

                                                                                gtgtCATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGAGAAACCAGCCAGt         >  2:2220452/1‑93 (MQ=255)

                                                                                    cATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCa     >  1:2250069/1‑93 (MQ=255)

                                                                                    cATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCa     <  1:399977/93‑1 (MQ=255)

                                                                                    cATGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCa     >  2:4164357/1‑93 (MQ=255)

                                                                                     aTGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCAc    >  1:3316308/1‑93 (MQ=255)

                                                                                      tGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCACt   >  2:2803771/1‑93 (MQ=255)

                                                                                      tGGTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCACt   >  1:5024907/1‑93 (MQ=255)

                                                                                       ggTGCTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCACTg  <  1:4168997/93‑1 (MQ=255)

ACGGGTTAACCTGGTAACCACCAAAAGCACCAGCGCCCAGTTGGTTTTCATGGGTCGGGCCATTGTTGTTGATGAAACCAGTGTCATGGTACTGGGACCAGCCCAGTTTAGCACCAGTGTACCAGGTGTTATCTTTCGGAGCGGCCTGCGCTACGGTAGCGAAACCAGCCAGTGCCACTG  >  NC_000913/1019072‑1019251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`