BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,035,719	C→T	T48M (ACG→ATG)	hyaE →	HyaE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,035,719	0	C	T	100.0%	763.5 / NA	206	T48M (ACG→ATG)	hyaE	HyaE
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (83/123); total (83/123)

Only 100 of 224 total aligned reads displayed.

CTGGACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTG  >  NC_000913/1035630‑1035808

 tGGACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCa                                                                                       <  2:630031/93‑1 (MQ=255)

   gACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCaga                                                                                     <  2:4228620/93‑1 (MQ=255)

   gACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCaga                                                                                     <  1:267561/93‑1 (MQ=255)

     cGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAgg                                                                                   <  2:409998/93‑1 (MQ=255)

     cGCAAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAgg                                                                                   <  1:5622649/93‑1 (MQ=255)

       ccAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTc                                                                                 <  1:2224244/93‑1 (MQ=255)

        cagtcagtGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCa                                                                                <  2:6314438/93‑1 (MQ=255)

         agtcagtGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAg                                                                               >  1:4337934/1‑93 (MQ=255)

            cagtGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGa                                                                            >  1:3321934/1‑93 (MQ=255)

             agtGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGAt                                                                           <  2:5368425/93‑1 (MQ=255)

               tGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATaa                                                                         <  2:3356076/93‑1 (MQ=255)

                gAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAAt                                                                        <  1:3036181/93‑1 (MQ=255)

                  aTCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATcc                                                                      >  1:6134695/1‑93 (MQ=255)

                      cGTCTTGACGACTGGCTTACGCAAGCGCCTGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTa                                                                  <  1:6597799/93‑1 (MQ=255)

                      cGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTa                                                                  <  2:3343608/93‑1 (MQ=255)

                      cGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTa                                                                  >  1:35102/1‑93 (MQ=255)

                      cGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGGGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTa                                                                  >  1:790423/1‑93 (MQ=255)

                        tCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTaaa                                                                >  1:1318832/1‑92 (MQ=255)

                        tCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAAt                                                                <  1:149805/93‑1 (MQ=255)

                        tCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAAt                                                                <  2:1779654/93‑1 (MQ=255)

                         cTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATg                                                               >  1:5451742/1‑93 (MQ=255)

                          ttGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGa                                                              <  1:5044964/93‑1 (MQ=255)

                          ttGACGACTGGCATACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGa                                                              >  2:3592459/1‑93 (MQ=255)

                           tGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGAt                                                             <  1:5234685/93‑1 (MQ=255)

                           tGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGAt                                                             <  2:343732/93‑1 (MQ=255)

                            gacgacTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGAtt                                                            >  1:4692736/1‑93 (MQ=255)

                             acgacTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTg                                                           <  2:3092043/93‑1 (MQ=255)

                             acgacTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTg                                                           <  2:188388/93‑1 (MQ=255)

                               gacTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGc                                                         <  1:3598413/93‑1 (MQ=255)

                               gacTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGc                                                         <  2:359876/93‑1 (MQ=255)

                                acTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCg                                                        >  1:5903271/1‑93 (MQ=255)

                                 cTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGa                                                       >  2:2628355/1‑93 (MQ=255)

                                 cTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGa                                                       <  2:6402744/93‑1 (MQ=255)

                                 cTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGa                                                       >  2:4585062/1‑93 (MQ=255)

                                   ggCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAAt                                                     <  2:3884387/93‑1 (MQ=255)

                                   ggCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAAt                                                     <  1:2836012/93‑1 (MQ=255)

                                    gCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAAtt                                                    <  1:3978031/93‑1 (MQ=255)

                                    gCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAAtt                                                    <  1:3858402/93‑1 (MQ=255)

                                    gCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAAtt                                                    <  1:2707822/93‑1 (MQ=255)

                                      ttACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTAc                                                  >  2:437817/1‑93 (MQ=255)

                                      ttACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTAc                                                  >  2:2642009/1‑93 (MQ=255)

                                       tACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACt                                                 <  1:6080695/93‑1 (MQ=255)

                                        aCGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTCATGATTGGCGAATTACTg                                                >  2:559971/1‑93 (MQ=255)

                                        aCGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTg                                                >  1:1870584/1‑93 (MQ=255)

                                         cGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTgg                                               >  2:5787691/1‑92 (MQ=255)

                                         cGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTgc                                               <  2:6180134/93‑1 (MQ=255)

                                         cGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTgc                                               <  2:2071558/93‑1 (MQ=255)

                                          gCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTgcg                                              >  1:1229539/1‑93 (MQ=255)

                                          gCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTAGCGAATTACTgcg                                              >  1:3163689/1‑93 (MQ=255)

                                           cAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTgcgc                                             >  2:1487669/1‑93 (MQ=255)

                                            aaGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGcgcg                                            <  2:5731677/93‑1 (MQ=255)

                                             aGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGa                                           >  2:250494/1‑93 (MQ=255)

                                               cgcCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGt                                         <  2:4435436/93‑1 (MQ=255)

                                                 ccAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGttt                                       <  1:1123127/93‑1 (MQ=255)

                                                  cAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTc                                      <  2:4519026/93‑1 (MQ=255)

                                                  cAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTc                                      <  2:3201396/93‑1 (MQ=255)

                                                   aGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTcc                                     <  2:589035/93‑1 (MQ=255)

                                                   aGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTcc                                     <  1:4219113/93‑1 (MQ=255)

                                                     aCGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCg                                   >  1:4067529/1‑93 (MQ=255)

                                                      cGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGa                                  >  2:2414147/1‑93 (MQ=255)

                                                       ggCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGAc                                 <  2:2695439/93‑1 (MQ=255)

                                                       ggCGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGAc                                 <  1:4188732/93‑1 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               <  2:679710/93‑1 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               <  2:2142022/93‑1 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               <  1:1641027/93‑1 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               <  2:6035105/93‑1 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               >  1:3265464/1‑93 (MQ=255)

                                                         cGTGGTGTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACta                               <  2:1611652/93‑1 (MQ=255)

                                                          gtggtgTTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACtat                              >  2:251729/1‑93 (MQ=255)

                                                             gtgaTATTAAGCAGTGACCCGAAACGCATCCCAGAGGTCAGCGATAATCCGGTAATGATTGGCAAATTACTGCGCGAGTATCCCGACTATACa                           <  1:6437834/93‑1 (MQ=255)

                                                              tgtTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACAt                          <  1:839873/93‑1 (MQ=255)

                                                              tgtTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACAt                          >  2:6174468/1‑93 (MQ=255)

                                                               gtTATTAAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATg                         >  2:5644940/1‑93 (MQ=255)

                                                                ttattaAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATgg                        <  1:4980579/93‑1 (MQ=255)

                                                                ttattaAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATgg                        <  2:1222475/93‑1 (MQ=255)

                                                                ttattaAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATgg                        <  2:1830778/93‑1 (MQ=255)

                                                                ttattaAGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATgg                        <  1:5174376/93‑1 (MQ=255)

                                                                     aaGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGACTTCCTGCGCGAGTTTCCCGACTATACATGGCAGGt                   <  2:1398002/93‑1 (MQ=255)

                                                                      aGCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTg                  <  2:2951199/93‑1 (MQ=255)

                                                                       gCAGTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTgg                 >  2:4531640/1‑93 (MQ=255)

                                                                          gTGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGa              >  1:2613866/1‑93 (MQ=255)

                                                                           tGACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGAt             <  1:5282048/93‑1 (MQ=255)

                                                                            gACCCGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGAtt            <  1:2169076/93‑1 (MQ=255)

                                                                               ccGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCt         <  2:3835864/93‑1 (MQ=255)

                                                                                cGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTg        <  1:1006206/93‑1 (MQ=255)

                                                                                cGAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTg        >  2:2348265/1‑93 (MQ=255)

                                                                                 gAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGa       <  2:5872737/93‑1 (MQ=255)

                                                                                 gAAACGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGa       <  1:4469992/93‑1 (MQ=255)

                                                                                  aaaCGCATGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGAc      <  2:5160685/93‑1 (MQ=255)

                                                                                    acgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCt    >  1:2397870/1‑93 (MQ=255)

                                                                                    acgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCt    <  2:1571610/93‑1 (MQ=255)

                                                                                    acgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCt    <  1:5778587/93‑1 (MQ=255)

                                                                                     cgcatgcCAGAGGTCAGCGATACTCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCtt   <  2:6662655/93‑1 (MQ=255)

                                                                                     cgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCtt   <  1:2536609/93‑1 (MQ=255)

                                                                                     cgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCtt   >  2:5762151/1‑93 (MQ=255)

                                                                                     cgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCtt   <  2:528314/93‑1 (MQ=255)

                                                                                     cgcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCtt   >  2:2722735/1‑93 (MQ=255)

                                                                                      gcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTg  <  2:5425100/93‑1 (MQ=255)

                                                                                      gcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTg  >  1:1722698/1‑93 (MQ=255)

                                                                                      gcatgcCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTg  >  2:6517276/1‑93 (MQ=255)

CTGGACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTG  >  NC_000913/1035630‑1035808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`