BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,040,218	G→A	A127T (GCA→ACA)	appA →	phosphoanhydride phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,040,218	0	G	A	100.0%	801.6 / NA	219	A127T (GCA→ACA)	appA	phosphoanhydride phosphorylase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (110/109); total (110/109)

Only 100 of 226 total aligned reads displayed.

AAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA  >  NC_000913/1040128‑1040307

aaGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACa                                                                                         >  1:1060289/1‑93 (MQ=255)

 aGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGacac                                                                                        >  2:4986299/1‑93 (MQ=255)

  gggCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACAcc                                                                                       >  1:3999266/1‑93 (MQ=255)

       gCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACt                                                                                  >  1:2167384/1‑93 (MQ=255)

         ccGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgt                                                                                >  1:2275970/1‑93 (MQ=255)

          cGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgtg                                                                               >  1:5347858/1‑93 (MQ=255)

           gCAGTGTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTCCCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGc                                                                              <  2:3461179/93‑1 (MQ=255)

           gCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGc                                                                              >  2:5667839/1‑93 (MQ=255)

           gCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGc                                                                              >  2:1694151/1‑93 (MQ=255)

             aGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCaa                                                                            >  2:6080635/1‑93 (MQ=255)

             aGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCaa                                                                            <  2:4638844/93‑1 (MQ=255)

              gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt                                                                           >  1:313020/1‑93 (MQ=255)

              gTCTGGTCAGGTCGCGATTATTGATGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGACTTCGACGCCGGGCTGACACCTGACTGTGCAAt                                                                           >  1:1897939/1‑93 (MQ=255)

                cTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATaa                                                                         <  2:232051/93‑1 (MQ=255)

                cTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATaa                                                                         >  2:2437780/1‑93 (MQ=255)

                 tGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAc                                                                        <  1:543340/93‑1 (MQ=255)

                 tGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAc                                                                        <  2:1454409/93‑1 (MQ=255)

                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       >  1:6465641/1‑93 (MQ=255)

                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       >  1:317305/1‑93 (MQ=255)

                   gTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCg                                                                      >  2:2212346/1‑93 (MQ=255)

                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   >  2:2924820/1‑93 (MQ=255)

                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   <  2:2781547/93‑1 (MQ=255)

                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   <  2:327896/93‑1 (MQ=255)

                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   >  2:6440993/1‑93 (MQ=255)

                       ggTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACa                                                                  <  2:5048469/93‑1 (MQ=255)

                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 >  1:5958124/1‑93 (MQ=255)

                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 <  2:5928980/93‑1 (MQ=255)

                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 <  1:3350310/93‑1 (MQ=255)

                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 >  2:5846067/1‑93 (MQ=255)

                          cgcgATTATTGCTGATGTCGACGAGCGTCCCCGTAAAACAGGCGAACCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAc                                                               <  2:1192850/93‑1 (MQ=255)

                           gcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCTAAGCCTTGCCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAcc                                                              >  1:6091730/1‑93 (MQ=255)

                            cgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAccc                                                             <  2:851808/93‑1 (MQ=255)

                             gATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCa                                                            <  2:797908/93‑1 (MQ=255)

                             gATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCa                                                            >  1:3490131/1‑93 (MQ=255)

                             gATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCa                                                            >  1:6327661/1‑93 (MQ=255)

                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           >  1:5154760/1‑93 (MQ=255)

                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           <  1:5411595/93‑1 (MQ=255)

                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           >  1:4536279/1‑93 (MQ=255)

                               ttattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAgg                                                          >  2:4443693/1‑93 (MQ=255)

                               ttattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAgg                                                          >  2:5970978/1‑93 (MQ=255)

                               ttattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAgg                                                          >  2:2558797/1‑93 (MQ=255)

                               ttattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAgg                                                          >  1:3688868/1‑93 (MQ=255)

                               ttattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAgg                                                          >  1:4641400/1‑93 (MQ=255)

                                 attGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCa                                                        <  1:3028070/93‑1 (MQ=255)

                                  ttGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAg                                                       >  2:5502603/1‑93 (MQ=255)

                                   tGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGa                                                      <  2:5218826/93‑1 (MQ=255)

                                     cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGGCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa                                                    >  2:419977/1‑93 (MQ=255)

                                     cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa                                                    >  2:2271845/1‑93 (MQ=255)

                                      tGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATAc                                                   >  1:5059153/1‑93 (MQ=255)

                                         tGTCGACGAGCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTc                                                <  1:1949819/93‑1 (MQ=255)

                                          ttCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  2:282709/92‑1 (MQ=255)

                                          gTCGAGGAGCGTACCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  1:1471963/93‑1 (MQ=255)

                                          gTCGACGGGCGTCCCCGTAAATCAGGAGAACCCGTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  1:5896764/93‑1 (MQ=255)

                                          gTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               >  1:4071303/1‑93 (MQ=255)

                                           tCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCa                                              <  2:5430771/93‑1 (MQ=255)

                                           tCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCa                                              >  1:502415/1‑93 (MQ=255)

                                            cgacgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAg                                             >  2:4280103/1‑93 (MQ=255)

                                              gcgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTc                                           <  2:137129/92‑1 (MQ=255)

                                              acgaGCGTGCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTc                                           <  2:6365463/93‑1 (MQ=255)

                                               cgaGCGTACCCGAAAACCAGGCGAAGCTTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTcc                                          <  1:3424175/93‑1 (MQ=255)

                                                gaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACGCCTGACGGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTccc                                         <  2:2097022/93‑1 (MQ=255)

                                                gaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTccc                                         <  2:2883495/93‑1 (MQ=255)

                                                 aGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACAGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCg                                        >  2:5789855/1‑93 (MQ=255)

                                                  gCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGa                                       >  1:6350282/1‑93 (MQ=255)

                                                  gCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGa                                       >  2:4580077/1‑93 (MQ=255)

                                                    gTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATc                                     <  2:3112550/93‑1 (MQ=255)

                                                    gTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATc                                     >  2:5360952/1‑93 (MQ=255)

                                                     tACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc                                    >  2:4060673/1‑93 (MQ=255)

                                                     tACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc                                    <  2:1944445/93‑1 (MQ=255)

                                                     tACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc                                    >  1:6532884/1‑93 (MQ=255)

                                                      aCCCGTAAAACAGGCGAACCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCg                                   <  2:3859075/93‑1 (MQ=255)

                                                       cccGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGt                                  <  1:2567561/93‑1 (MQ=255)

                                                        ccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGtt                                 <  2:2392314/93‑1 (MQ=255)

                                                        ccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGtt                                 <  2:1221060/93‑1 (MQ=255)

                                                        ccGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGtt                                 <  1:2747171/93‑1 (MQ=255)

                                                             aaaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTa                            >  1:6483220/1‑93 (MQ=255)

                                                             aaaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTa                            >  1:4748372/1‑93 (MQ=255)

                                                              aaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTaa                           >  2:6502868/1‑93 (MQ=255)

                                                              aaCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTaa                           <  2:6189601/93‑1 (MQ=255)

                                                               aCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAAt                          <  2:1155017/93‑1 (MQ=255)

                                                               aCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAAt                          >  1:3040161/1‑93 (MQ=255)

                                                                  ggCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCct                       <  1:4288225/93‑1 (MQ=255)

                                                                     gAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTa                    >  1:1542393/1‑93 (MQ=255)

                                                                      aaGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaa                   >  1:2349003/1‑93 (MQ=255)

                                                                        gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa                 >  1:131471/1‑93 (MQ=255)

                                                                        gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa                 >  2:1829584/1‑93 (MQ=255)

                                                                        gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa                 >  1:6675624/1‑93 (MQ=255)

                                                                          cTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAAc               >  1:2076978/1‑93 (MQ=255)

                                                                           ttCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACt              >  2:710055/1‑93 (MQ=255)

                                                                            tCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTg             <  2:1051376/93‑1 (MQ=255)

                                                                            tCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTg             >  2:6635199/1‑93 (MQ=255)

                                                                             cgccgcCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTgg            <  2:6061636/93‑1 (MQ=255)

                                                                             cgccgcCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTgg            <  2:1664357/93‑1 (MQ=255)

                                                                                cgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCATGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGt         >  2:4691502/1‑93 (MQ=255)

                                                                                cgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGt         >  2:4522080/1‑93 (MQ=255)

                                                                                cgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGt         <  1:6143819/93‑1 (MQ=255)

                                                                                 gccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGtt        <  1:3532695/93‑1 (MQ=255)

                                                                                  ccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGttt       >  1:5130376/1‑93 (MQ=255)

                                                                                    gggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGc     >  2:3032121/1‑93 (MQ=255)

                                                                                      gCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCa   >  1:5520370/1‑93 (MQ=255)

AAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA  >  NC_000913/1040128‑1040307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`