BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,048,676	A→G	S104P (TCC→CCC)	ymcD ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,048,676	0	A	G	99.6%	817.6 / NA	253	S104P (TCC→CCC)	ymcD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (160/92); total (161/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 256 total aligned reads displayed.

TGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA  >  NC_000913/1048586‑1048765

tGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCg                                                                                         >  1:1149211/1‑93 (MQ=255)

tGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCg                                                                                         <  2:3123282/93‑1 (MQ=255)

  cAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtg                                                                                       <  1:3548743/93‑1 (MQ=255)

   aaaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtgg                                                                                      >  2:3523209/1‑93 (MQ=255)

    aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                     >  1:6396096/1‑93 (MQ=255)

    aaTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggt                                                                                     >  1:771592/1‑93 (MQ=255)

     aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg                                                                                    >  2:6380834/1‑93 (MQ=255)

     aTCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCgtggtg                                                                                    <  1:4909972/93‑1 (MQ=255)

       ctctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTggtggt                                                                                  <  1:832361/93‑1 (MQ=255)

       ctctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTggtggt                                                                                  <  2:5041204/93‑1 (MQ=255)

        tctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGtt                                                                                 <  1:4675448/93‑1 (MQ=255)

         ctAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTg                                                                                >  1:1804741/1‑93 (MQ=255)

          tAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGa                                                                               <  2:3846690/93‑1 (MQ=255)

           aaaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAg                                                                              >  1:1530186/1‑93 (MQ=255)

            aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                             >  1:292097/1‑93 (MQ=255)

            aaGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAgg                                                                             <  1:3458932/93‑1 (MQ=255)

             aGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGgt                                                                            <  1:5749176/93‑1 (MQ=255)

                ccGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGtt                                                                         >  1:6056443/1‑93 (MQ=255)

                ccGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGtt                                                                         >  2:170453/1‑93 (MQ=255)

                ccGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGtt                                                                         >  1:2593044/1‑93 (MQ=255)

                 cGGTACGAATATCGCACCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTa                                                                        <  1:1084446/93‑1 (MQ=255)

                  ggTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTAt                                                                       >  1:4093276/1‑93 (MQ=255)

                    tACTAATATCGCAACCGGGTATCAGTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATga                                                                     <  1:3302061/93‑1 (MQ=255)

                    tACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATga                                                                     >  1:3848465/1‑93 (MQ=255)

                       gAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGaa                                                                  <  1:4773428/93‑1 (MQ=255)

                        aaTATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAc                                                                 <  2:642813/93‑1 (MQ=255)

                        aaTATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAc                                                                 >  2:5824063/1‑93 (MQ=255)

                        aaTATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTACGAGAAc                                                                 >  1:2184265/1‑93 (MQ=255)

                         atatCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAcc                                                                <  2:4742689/93‑1 (MQ=255)

                          tatCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAAccc                                                               >  2:1930467/1‑92 (MQ=255)

                          tatCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCg                                                               >  2:4228278/1‑93 (MQ=255)

                          tatCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCg                                                               >  1:4329718/1‑93 (MQ=255)

                             cGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCa                                                            >  2:3982773/1‑93 (MQ=255)

                              gCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCAt                                                           <  1:5557862/93‑1 (MQ=255)

                                 aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc                                                        >  2:6568779/1‑93 (MQ=255)

                                 aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc                                                        >  2:5714556/1‑93 (MQ=255)

                                 aCCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGc                                                        >  2:59406/1‑93 (MQ=255)

                                    gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc                                                     <  2:2709389/93‑1 (MQ=255)

                                    gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc                                                     >  2:2157652/1‑93 (MQ=255)

                                    gggTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCAc                                                     <  1:3603950/93‑1 (MQ=255)

                                      gTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTg                                                   <  2:913866/93‑1 (MQ=255)

                                       tATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGt                                                  >  2:1630041/1‑93 (MQ=255)

                                        aTCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTc                                                 >  1:2036257/1‑93 (MQ=255)

                                        aTCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTc                                                 >  2:5762720/1‑93 (MQ=255)

                                        aTCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGAGTTATGAGAACCGCCATCGCCACTGTc                                                 >  1:4877969/1‑93 (MQ=255)

                                         tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCa                                                <  2:1461586/93‑1 (MQ=255)

                                         tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCa                                                <  2:2981641/93‑1 (MQ=255)

                                         tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCa                                                <  2:3698069/93‑1 (MQ=255)

                                         tCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGGGTTATGAGAACCGCCATCGCCACTGTCa                                                >  1:5092124/1‑93 (MQ=255)

                                           aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                              <  2:1062920/93‑1 (MQ=255)

                                           aTTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAtt                                              >  2:5272272/1‑93 (MQ=255)

                                            tttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCAttt                                             >  2:5464022/1‑93 (MQ=255)

                                             ttAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtg                                            >  2:2124031/1‑93 (MQ=255)

                                              tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                           >  2:1263730/1‑93 (MQ=255)

                                              tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                           >  2:1421488/1‑93 (MQ=255)

                                              tAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgc                                           >  2:782153/1‑93 (MQ=255)

                                               aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                          <  1:5521774/93‑1 (MQ=255)

                                               aaCTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgct                                          >  2:3749464/1‑93 (MQ=255)

                                                 cTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTtgctgc                                        >  1:5380510/1‑93 (MQ=255)

                                                    tAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaac                                     <  2:4657831/93‑1 (MQ=255)

                                                      aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                   >  1:1292680/1‑93 (MQ=255)

                                                      aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                   <  1:4959842/93‑1 (MQ=255)

                                                      aTTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGcaacaa                                   <  1:5009791/93‑1 (MQ=255)

                                                       tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                  >  2:6251872/1‑93 (MQ=255)

                                                       tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                  >  2:5632100/1‑93 (MQ=255)

                                                       tttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCaacaac                                  >  1:440033/1‑93 (MQ=255)

                                                        ttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACt                                 >  2:5209980/1‑93 (MQ=255)

                                                        ttCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACt                                 >  2:2017068/1‑93 (MQ=255)

                                                           gACGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGACCCCCCATCGCCACTGTCATTTGCTGCAACAACTGcc                              <  2:4320749/93‑1 (MQ=255)

                                                            aCGCGTTAAAGCAGTATTAGCGTGTAGTGTGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCa                             <  2:2941492/93‑1 (MQ=255)

                                                            aCGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCa                             <  1:1668917/93‑1 (MQ=255)

                                                            aCGCGTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCa                             >  1:3222286/1‑93 (MQ=255)

                                                             cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                            >  2:2533159/1‑93 (MQ=255)

                                                             cgcgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCaa                            <  1:2366224/93‑1 (MQ=255)

                                                               cgTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACg                          >  2:4544266/1‑93 (MQ=255)

                                                                gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGTTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt                         <  1:3378785/93‑1 (MQ=255)

                                                                gTTAAAGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGt                         <  1:459281/93‑1 (MQ=255)

                                                                    aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc                     >  2:2681340/1‑93 (MQ=255)

                                                                    aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc                     >  2:1294138/1‑93 (MQ=255)

                                                                    aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc                     >  1:1346091/1‑93 (MQ=255)

                                                                    aaGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGcc                     >  2:6696818/1‑93 (MQ=255)

                                                                     aGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCca                    >  1:5681678/1‑93 (MQ=255)

                                                                     aGCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCca                    >  1:719820/1‑93 (MQ=255)

                                                                      gCAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcac                   >  2:4261872/1‑93 (MQ=255)

                                                                       cAGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGGGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCcaca                  >  1:310236/1‑93 (MQ=255)

                                                                        aGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCacac                 >  2:5076256/1‑93 (MQ=255)

                                                                        aGTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCacac                 >  1:454803/1‑93 (MQ=255)

                                                                         gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc                >  1:6645172/1‑93 (MQ=255)

                                                                         gTATTAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACAcc                >  2:6336375/1‑93 (MQ=255)

                                                                             tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa            <  2:3280992/93‑1 (MQ=255)

                                                                             tAGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACa            <  1:414432/93‑1 (MQ=255)

                                                                              aGCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAg           >  2:4378155/1‑93 (MQ=255)

                                                                               gCGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGc          <  1:878275/93‑1 (MQ=255)

                                                                                cGTGTAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGcc         <  2:358291/93‑1 (MQ=255)

                                                                                 gtgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCg        >  1:6108677/1‑93 (MQ=255)

                                                                                 gtgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCg        >  2:2412654/1‑93 (MQ=255)

                                                                                 gtgtAGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCg        >  2:2373350/1‑93 (MQ=255)

                                                                                     aGTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGc    >  2:6086170/1‑93 (MQ=255)

                                                                                      gTGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGcc   >  1:6519608/1‑93 (MQ=255)

                                                                                       tGGGCGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCca  <  2:3210685/93‑1 (MQ=255)

TGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAGTGGACGTGGTGGTTGAGGTGTTATGAGAACCGCCATCGCCACTGTCATTTGCTGCAACAACTGCCAACGTCGCCACACCAACAGCCGTTGCCA  >  NC_000913/1048586‑1048765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`