BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,053,401	T→C	A657A (GCA→GCG)	torS ←	TorS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,053,401	0	T	C	100.0%	722.1 / NA	224	A657A (GCA→GCG)	torS	TorS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (135/89); total (135/89)

Only 100 of 233 total aligned reads displayed.

GGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG  >  NC_000913/1053311‑1053490

ggTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGgcgc                                                                                         <  1:832396/93‑1 (MQ=255)

  tAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCg                                                                                       >  2:2470399/1‑93 (MQ=255)

   aaTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGt                                                                                      <  2:4613178/93‑1 (MQ=255)

    aTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTg                                                                                     >  2:5025259/1‑93 (MQ=255)

    aTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTg                                                                                     >  1:1621868/1‑93 (MQ=255)

          tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca                                                                               <  2:4915497/93‑1 (MQ=255)

          tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca                                                                               >  1:5238023/1‑93 (MQ=255)

           gggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAacac                                                                              <  1:459154/93‑1 (MQ=255)

             gTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGt                                                                            <  1:6465430/93‑1 (MQ=255)

              ttAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTa                                                                           <  1:622664/93‑1 (MQ=255)

              ttAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTa                                                                           >  2:3988117/1‑93 (MQ=255)

                aGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAc                                                                         <  1:4391475/93‑1 (MQ=255)

                  cGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACgg                                                                       <  2:390769/93‑1 (MQ=255)

                  cGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACgg                                                                       >  2:5116605/1‑93 (MQ=255)

                   gggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGc                                                                      >  2:1983550/1‑93 (MQ=255)

                   gggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGc                                                                      >  2:2365706/1‑93 (MQ=255)

                    ggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCa                                                                     <  2:5681834/93‑1 (MQ=255)

                    ggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCa                                                                     >  1:2803171/1‑93 (MQ=255)

                     gTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGGaa                                                                    >  2:2949980/1‑93 (MQ=255)

                     gTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCaa                                                                    >  1:5644441/1‑93 (MQ=255)

                     gTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCaa                                                                    >  1:130658/1‑93 (MQ=255)

                       tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc                                                                  >  1:441403/1‑93 (MQ=255)

                        aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg                                                                 >  1:289448/1‑93 (MQ=255)

                        aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg                                                                 >  1:1485961/1‑93 (MQ=255)

                        aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg                                                                 >  2:3164269/1‑93 (MQ=255)

                        aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGAAAGCg                                                                 >  2:2050693/1‑93 (MQ=255)

                            tCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTaaa                                                             >  2:267949/1‑93 (MQ=255)

                             cAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAAc                                                            >  1:5045975/1‑93 (MQ=255)

                             cAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAAc                                                            <  1:4976864/93‑1 (MQ=255)

                               aTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaa                                                          >  2:3538136/1‑93 (MQ=255)

                               aTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaa                                                          >  1:1288025/1‑93 (MQ=255)

                               aTTAACAGCAAACGTAAACCGTCAAGACGAACCGCCCGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAGGCGTaaagca                                                          >  2:3595815/1‑90 (MQ=255)

                                ttAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaa                                                         >  2:5247075/1‑93 (MQ=255)

                                 tAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaa                                                        >  2:2981882/1‑93 (MQ=255)

                                  aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa                                                       <  2:464173/93‑1 (MQ=255)

                                  aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa                                                       >  2:3333479/1‑93 (MQ=255)

                                  aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa                                                       >  2:1242697/1‑93 (MQ=255)

                                   aCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc                                                      >  1:2541120/1‑93 (MQ=255)

                                      gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGc                                                   >  1:5446390/1‑93 (MQ=255)

                                      gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGc                                                   <  1:1935441/93‑1 (MQ=255)

                                      gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGc                                                   <  1:5195845/93‑1 (MQ=255)

                                      gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTAGCAACACGTAACGGCAAGCGTAAACAAAAACAGc                                                   <  1:5685703/93‑1 (MQ=255)

                                       cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt                                                  <  1:1809229/93‑1 (MQ=255)

                                       cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt                                                  <  1:6381223/93‑1 (MQ=255)

                                         aaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTc                                                >  1:2421164/1‑93 (MQ=255)

                                         aaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTc                                                >  2:4502548/1‑93 (MQ=255)

                                          aCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTcc                                               <  1:275597/93‑1 (MQ=255)

                                          aCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTcc                                               <  2:1643829/93‑1 (MQ=255)

                                          aCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTcc                                               <  2:1724196/93‑1 (MQ=255)

                                            gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa                                             >  1:1049647/1‑93 (MQ=255)

                                            gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa                                             >  1:4850428/1‑93 (MQ=255)

                                              aaaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAcc                                           >  2:286419/1‑93 (MQ=255)

                                               aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt                                          <  2:6342547/93‑1 (MQ=255)

                                               aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt                                          >  1:6707681/1‑93 (MQ=255)

                                               aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt                                          >  2:1972704/1‑93 (MQ=255)

                                                aCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTc                                         <  1:5859334/93‑1 (MQ=255)

                                                 ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc                                        <  2:2622726/93‑1 (MQ=255)

                                                   gTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCgg                                      >  2:5875555/1‑93 (MQ=255)

                                                    tCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGc                                     >  1:4072211/1‑93 (MQ=255)

                                                      aaGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGt                                   >  1:2302036/1‑93 (MQ=255)

                                                      aaGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGt                                   >  2:82067/1‑93 (MQ=255)

                                                       aGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCGACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTg                                  >  1:2194733/1‑93 (MQ=255)

                                                       aGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACCAAAACAGCTTCCAACCTCCGGCGTg                                  >  1:2341315/1‑93 (MQ=255)

                                                       aGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTg                                  >  2:3830062/1‑93 (MQ=255)

                                                       aGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTg                                  >  2:4288397/1‑93 (MQ=255)

                                                        gACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGc                                 >  2:6562453/1‑93 (MQ=255)

                                                        gACGCACCGCCTGATTGACTGATTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGc                                 >  2:6668885/1‑93 (MQ=255)

                                                         aCGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCTGCGTGCt                                <  1:1106047/93‑1 (MQ=255)

                                                           gCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg                              <  1:3936459/93‑1 (MQ=255)

                                                           gCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg                              >  1:3746270/1‑93 (MQ=255)

                                                           gCACCGCCTGATTAACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg                              >  1:3322128/1‑93 (MQ=255)

                                                            cACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggt                             <  2:4768184/93‑1 (MQ=255)

                                                            cACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggt                             >  2:3418592/1‑93 (MQ=255)

                                                               cGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgc                          >  1:865764/1‑93 (MQ=255)

                                                                 ccTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCACCCTCCGGCGTGCTGGTGgcgc                        <  1:3218003/93‑1 (MQ=255)

                                                                 ccTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgcgc                        >  2:1344427/1‑93 (MQ=255)

                                                                  cTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCt                       >  2:4756224/1‑93 (MQ=255)

                                                                  cTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCt                       >  2:4145653/1‑93 (MQ=255)

                                                                   tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGGTGGTGGCGCTc                      >  2:1585666/1‑93 (MQ=255)

                                                                   tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      >  1:6442133/1‑93 (MQ=255)

                                                                   tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      <  2:2964794/93‑1 (MQ=255)

                                                                    gATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa                     >  2:5336390/1‑93 (MQ=255)

                                                                    gATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa                     >  1:2479070/1‑93 (MQ=255)

                                                                      ttGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGt                   <  1:3459754/93‑1 (MQ=255)

                                                                       tGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGtt                  >  2:918897/1‑93 (MQ=255)

                                                                       tGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGtt                  <  1:6466289/93‑1 (MQ=255)

                                                                        gACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTc                 >  1:2122101/1‑93 (MQ=255)

                                                                           tGTTTTTGGCACGGGCGCCGTGGCAACACGTACCGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc              <  2:3256205/93‑1 (MQ=255)

                                                                           tGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc              <  2:6065154/93‑1 (MQ=255)

                                                                           tGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc              >  1:1507105/1‑93 (MQ=255)

                                                                            gTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgccg             >  1:4734866/1‑93 (MQ=255)

                                                                             tttttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgccgc            >  1:614301/1‑93 (MQ=255)

                                                                               tttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGccc          <  1:5740143/93‑1 (MQ=255)

                                                                                  ggCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATc       <  1:4162722/93‑1 (MQ=255)

                                                                                  ggCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATc       >  1:4280787/1‑93 (MQ=255)

                                                                                  ggCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATc       <  1:3053135/93‑1 (MQ=255)

                                                                                  ggCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATc       >  2:1545071/1‑93 (MQ=255)

                                                                                     aCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGcc    <  2:1307729/93‑1 (MQ=255)

                                                                                      cGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCt   <  1:3794997/93‑1 (MQ=255)

                                                                                       gggCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTg  >  2:4462523/1‑93 (MQ=255)

GGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG  >  NC_000913/1053311‑1053490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`