BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,056,882	T→C	Y99C (TAC→TGC)	torR ←	TorR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,056,882	0	T	C	100.0%	664.9 / NA	207	Y99C (TAC→TGC)	torR	TorR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/109); total (98/109)

Only 100 of 217 total aligned reads displayed.

TGCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGTAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTTCT  >  NC_000913/1056792‑1056971

 gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  1:1343248/93‑1 (MQ=255)

 gCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  1:6441834/93‑1 (MQ=255)

 gCGGTTGAGCTTGTCGCGCGAGGTCGATACGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAAt                                                                                        <  1:1407137/93‑1 (MQ=255)

  cGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATc                                                                                       <  2:4381826/93‑1 (MQ=255)

  cGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATc                                                                                       <  1:62551/93‑1 (MQ=255)

   ggTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCg                                                                                      >  1:1173422/1‑93 (MQ=255)

   ggTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCg                                                                                      <  2:5387583/93‑1 (MQ=255)

   ggTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCg                                                                                      <  1:3370899/93‑1 (MQ=255)

    gTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGt                                                                                     >  1:6020413/1‑93 (MQ=255)

      tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCctct                                                                                   >  2:1229472/1‑93 (MQ=255)

      tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCt                                                                                   <  1:128970/93‑1 (MQ=255)

      tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCt                                                                                   <  2:5967634/93‑1 (MQ=255)

      tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCt                                                                                   >  1:2511122/1‑93 (MQ=255)

      tGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCt                                                                                   <  1:3604399/93‑1 (MQ=255)

       gAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTACAGCGGTTTGGTGACGCAATCGTCTg                                                                                  >  1:2852998/1‑93 (MQ=255)

          cgtGTCGCGGGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTgcgc                                                                               <  2:105797/91‑1 (MQ=255)

          cTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTgcgc                                                                               >  2:3449079/1‑93 (MQ=255)

           ttGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGcc                                                                              >  1:179997/1‑93 (MQ=255)

           ttGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGcc                                                                              >  2:4769693/1‑93 (MQ=255)

             gTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCa                                                                            >  2:5010255/1‑93 (MQ=255)

             gTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCa                                                                            >  2:5401715/1‑93 (MQ=255)

              tCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCAt                                                                           >  1:993770/1‑93 (MQ=255)

              tCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCAt                                                                           <  1:5032549/93‑1 (MQ=255)

                  gcgAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTcc                                                                       <  2:4166675/93‑1 (MQ=255)

                    gAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAg                                                                     <  1:1014638/93‑1 (MQ=255)

                    gAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAg                                                                     >  2:3339018/1‑93 (MQ=255)

                     aGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGc                                                                    <  1:2694507/93‑1 (MQ=255)

                     aGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGc                                                                    >  1:4525490/1‑93 (MQ=255)

                     aGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGc                                                                    >  2:4514746/1‑93 (MQ=255)

                       gTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGccc                                                                  <  2:2131236/93‑1 (MQ=255)

                            ttCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCcaacaa                                                             >  2:1552555/1‑93 (MQ=255)

                              cGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATa                                                           <  1:377712/93‑1 (MQ=255)

                               gCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATAc                                                          <  2:1964438/93‑1 (MQ=255)

                                ccAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACg                                                         >  2:6247521/1‑93 (MQ=255)

                                 cAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACgg                                                        <  1:3174332/93‑1 (MQ=255)

                                  agagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGt                                                       >  2:2606158/1‑93 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      <  2:443258/93‑1 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      >  1:4670282/1‑93 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      >  1:5655103/1‑93 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      >  2:3915206/1‑93 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      >  2:2537470/1‑93 (MQ=255)

                                   gagCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTc                                                      >  1:4308708/1‑93 (MQ=255)

                                    agCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCa                                                     <  2:2294928/93‑1 (MQ=255)

                                    agCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCa                                                     <  1:1980297/93‑1 (MQ=255)

                                     gCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCaa                                                    >  2:5112119/1‑93 (MQ=255)

                                     gCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCaa                                                    >  1:5229439/1‑93 (MQ=255)

                                       aGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATc                                                  <  2:2953358/93‑1 (MQ=255)

                                       aGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATc                                                  <  2:4122103/93‑1 (MQ=255)

                                        gATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCCACAATACGGTCAATcc                                                 >  1:16566/1‑93 (MQ=255)

                                        gATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATcc                                                 >  1:2222449/1‑93 (MQ=255)

                                        gATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATcc                                                 >  2:5667116/1‑93 (MQ=255)

                                          tttttCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGa                                               >  1:1489009/1‑93 (MQ=255)

                                            tttCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATc                                             <  2:4739494/93‑1 (MQ=255)

                                              tCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGc                                           >  2:672955/1‑93 (MQ=255)

                                              tCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGc                                           <  1:4289672/93‑1 (MQ=255)

                                                ccccGTACTGCCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTg                                         <  2:4085187/92‑1 (MQ=255)

                                                 cccGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGc                                        <  1:2968014/93‑1 (MQ=255)

                                                    gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                     <  1:2902985/93‑1 (MQ=255)

                                                    gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                     <  1:4940424/93‑1 (MQ=255)

                                                    gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                     <  1:677990/93‑1 (MQ=255)

                                                    gTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTc                                     <  1:916054/93‑1 (MQ=255)

                                                     tactacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTcc                                    <  1:6200817/93‑1 (MQ=255)

                                                      actacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCg                                   <  2:1410972/93‑1 (MQ=255)

                                                      actacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTCCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCg                                   <  2:5624520/93‑1 (MQ=255)

                                                        tacCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGt                                 <  2:3380794/93‑1 (MQ=255)

                                                         acCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTa                                <  1:4015381/93‑1 (MQ=255)

                                                         acCAGTTCGCGCAGTTCCAGCGGATTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCCACAATACGGTCAATCCGATCGCTGCGTCCggga                                >  1:5403378/1‑91 (MQ=255)

                                                          ccAGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTaa                               <  2:3267455/93‑1 (MQ=255)

                                                            aGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAcc                             >  1:478971/1‑93 (MQ=255)

                                                            aGTTCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAAcc                             <  2:6163220/93‑1 (MQ=255)

                                                              ttCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAg                           >  1:3571051/1‑93 (MQ=255)

                                                              ttCGCGCAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAg                           <  1:3988277/93‑1 (MQ=255)

                                                                 gcgcAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaat                        >  2:1099323/1‑93 (MQ=255)

                                                                  cgcAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaata                       >  2:4612081/1‑93 (MQ=255)

                                                                  cgcAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaata                       >  2:5262579/1‑93 (MQ=255)

                                                                   gcAGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGaataa                      >  2:194502/1‑93 (MQ=255)

                                                                     aGTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATc                    <  2:1766040/93‑1 (MQ=255)

                                                                      gTTCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATcc                   >  2:604706/1‑93 (MQ=255)

                                                                       ttCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATccc                  >  1:6083408/1‑93 (MQ=255)

                                                                        tCCAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATcccc                 <  2:655741/93‑1 (MQ=255)

                                                                          cAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAc               <  1:5766396/93‑1 (MQ=255)

                                                                          cAGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAc               >  2:3009807/1‑93 (MQ=255)

                                                                           aGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAcc              >  2:3806764/1‑93 (MQ=255)

                                                                           aGCGGTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCAcc              >  2:1717719/1‑93 (MQ=255)

                                                                              ggTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGtt           >  2:4199449/1‑93 (MQ=255)

                                                                              ggTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGtt           >  1:5584053/1‑93 (MQ=255)

                                                                               gTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTg          >  1:3582504/1‑93 (MQ=255)

                                                                               gTTTGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTg          <  2:6390133/93‑1 (MQ=255)

                                                                                tttGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa         <  1:4087961/93‑1 (MQ=255)

                                                                                tttGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGa         <  2:5709457/93‑1 (MQ=255)

                                                                                  tGGTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGc       <  1:391235/93‑1 (MQ=255)

                                                                                    gTGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGt     >  1:1898483/1‑93 (MQ=255)

                                                                                     tGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGtt    <  1:4365973/93‑1 (MQ=255)

                                                                                     tGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGtt    <  2:5892885/93‑1 (MQ=255)

                                                                                     tGACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGtt    <  1:5848237/93‑1 (MQ=255)

                                                                                     ggACGCAATGGTCTGCGCCCATTTCCAGCCGAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGtt    <  1:2212737/92‑1 (MQ=255)

                                                                                      gACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtc   <  2:1166335/93‑1 (MQ=255)

                                                                                      gACGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtc   <  2:1308715/93‑1 (MQ=255)

                                                                                       aCGCAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtct  <  2:5093862/93‑1 (MQ=255)

                                                                                       aCGCAATCGTCTGCGCCCATTTACAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTtct  >  1:5897025/1‑93 (MQ=255)

TGCGGTTGAGCTTGTCGCGCGAGGTCGATTCGCCAGAGCAGATTTTTCACCCGTACTACCAGTTCGCGCAGTTCCAGCGGTTTGGTGACGTAATCGTCTGCGCCCATTTCCAGCCCAACAATACGGTCAATCCGATCGCTGCGTCCGGTAACCAGAATAATCCCCACCGTTGAGCGTTCT  >  NC_000913/1056792‑1056971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`