BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,059,305	A→G	H276R (CAT→CGT)	torA →	trimethylamine N‑oxide reductase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,059,305	0	A	G	100.0%	751.7 / NA	228	H276R (CAT→CGT)	torA	trimethylamine N‑oxide reductase subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (129/99); total (129/99)

Only 100 of 234 total aligned reads displayed.

ATGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCATGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCTG  >  NC_000913/1059215‑1059393

aTGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTg                                                                                        <  2:5583802/93‑1 (MQ=255)

aTGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTg                                                                                        >  2:3414905/1‑93 (MQ=255)

 tGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGa                                                                                       >  2:4918986/1‑93 (MQ=255)

  gTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAg                                                                                      <  1:2673727/93‑1 (MQ=255)

  gTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAg                                                                                      >  1:2522728/1‑93 (MQ=255)

   tttATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGt                                                                                     <  2:6391655/93‑1 (MQ=255)

    ttATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTa                                                                                    <  2:3072458/93‑1 (MQ=255)

    ttATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTa                                                                                    <  1:5934569/93‑1 (MQ=255)

     tATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTAt                                                                                   <  1:6425455/93‑1 (MQ=255)

     tATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTAt                                                                                   >  1:6387302/1‑93 (MQ=255)

       tGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCt                                                                                 >  2:2391061/1‑93 (MQ=255)

          atatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTggg                                                                              <  1:554000/93‑1 (MQ=255)

          atatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTggg                                                                              <  2:4376136/93‑1 (MQ=255)

          agatTACGCGCAGCTAGAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTggg                                                                              <  1:584812/91‑1 (MQ=255)

           tatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTgggg                                                                             <  2:718471/93‑1 (MQ=255)

           tatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTgggg                                                                             <  1:2390073/93‑1 (MQ=255)

           tatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTgggg                                                                             >  1:4703556/1‑93 (MQ=255)

           tatTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTgggg                                                                             >  1:5372674/1‑93 (MQ=255)

            atTGCGCGCAGCTAAAATCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgc                                                                            <  1:1962442/93‑1 (MQ=255)

            atTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgc                                                                            >  2:1280108/1‑93 (MQ=255)

            atTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgc                                                                            >  1:2040993/1‑93 (MQ=255)

            atTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgc                                                                            >  1:816313/1‑93 (MQ=255)

             ttACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgcg                                                                           <  1:1496337/93‑1 (MQ=255)

             ttACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgcg                                                                           >  1:4436295/1‑93 (MQ=255)

              tACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgcgc                                                                          >  2:504124/1‑93 (MQ=255)

              tACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgcgc                                                                          >  2:3603979/1‑93 (MQ=255)

              tACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGgcgc                                                                          <  1:5710309/93‑1 (MQ=255)

                cgcgCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGa                                                                        <  2:3460767/93‑1 (MQ=255)

                 gcgcAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAg                                                                       >  1:5088224/1‑93 (MQ=255)

                 gcgcAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAg                                                                       >  1:6058546/1‑93 (MQ=255)

                   gcAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCa                                                                     <  1:2881953/93‑1 (MQ=255)

                     aGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCAtg                                                                   >  2:3174336/1‑93 (MQ=255)

                      gCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCAtgt                                                                  <  1:158871/93‑1 (MQ=255)

                       cTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCAtgtg                                                                 >  1:1453012/1‑93 (MQ=255)

                        tAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGa                                                                >  2:1186253/1‑93 (MQ=255)

                          aaaGCGAAAGTCGCCGCCGGTGAAATTGAGTTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAg                                                              <  2:6157338/93‑1 (MQ=255)

                          aaaGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAg                                                              >  2:4175804/1‑93 (MQ=255)

                          aaaGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAg                                                              <  1:5444197/93‑1 (MQ=255)

                          aaaGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAg                                                              >  2:1751845/1‑93 (MQ=255)

                            aGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGca                                                            >  1:350359/1‑93 (MQ=255)

                             gggAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGcac                                                           <  2:5618343/91‑1 (MQ=255)

                              cGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGcaca                                                          <  1:5058804/93‑1 (MQ=255)

                               gAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACAt                                                         >  1:6181562/1‑93 (MQ=255)

                                 aaGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTg                                                       >  2:6523503/1‑93 (MQ=255)

                                   gTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCg                                                     <  1:1344171/93‑1 (MQ=255)

                                   gTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCg                                                     >  2:4638724/1‑93 (MQ=255)

                                   gTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCg                                                     >  1:615763/1‑93 (MQ=255)

                                   gTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCg                                                     >  1:1036003/1‑93 (MQ=255)

                                      gccgccGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGtt                                                  >  2:662053/1‑93 (MQ=255)

                                        cgccgGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTaa                                                >  1:5747101/1‑93 (MQ=255)

                                        cgccgGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTaa                                                >  1:3928450/1‑93 (MQ=255)

                                         gccgGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAAc                                               >  2:5786929/1‑93 (MQ=255)

                                             gTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGc                                           >  1:1439841/1‑93 (MQ=255)

                                                aaaTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCaaa                                        <  2:3532768/93‑1 (MQ=255)

                                                 aaTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAAc                                       <  1:2183252/93‑1 (MQ=255)

                                                 aaTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAAc                                       <  1:3166739/93‑1 (MQ=255)

                                                 aaTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAAc                                       <  1:752534/93‑1 (MQ=255)

                                                  aTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACt                                      <  1:512292/93‑1 (MQ=255)

                                                  aTTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACt                                      >  2:1812719/1‑93 (MQ=255)

                                                   ttGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTg                                     >  2:3997323/1‑93 (MQ=255)

                                                      aGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACg                                  >  2:1839356/1‑93 (MQ=255)

                                                      aGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACg                                  <  2:5401512/93‑1 (MQ=255)

                                                      aGGTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACg                                  <  2:2690181/93‑1 (MQ=255)

                                                       ggTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGt                                 >  2:2799807/1‑93 (MQ=255)

                                                        gTCATCAGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTg                                >  1:3397558/1‑93 (MQ=255)

                                                          catcaGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGcc                              >  2:38372/1‑93 (MQ=255)

                                                           atcaGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCg                             >  1:1843454/1‑93 (MQ=255)

                                                            tcaGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGc                            >  2:204946/1‑93 (MQ=255)

                                                            tcaGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGc                            <  1:4857859/93‑1 (MQ=255)

                                                            tcaGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGc                            <  1:1179086/93‑1 (MQ=255)

                                                             caGCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCt                           <  1:975456/93‑1 (MQ=255)

                                                               gCATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGc                         >  1:3633605/1‑93 (MQ=255)

                                                                cATCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCa                        >  1:6360895/1‑93 (MQ=255)

                                                                  tCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAAc                      >  1:1645/1‑93 (MQ=255)

                                                                  tCGATCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGACGCTGCAAc                      >  1:3128102/1‑93 (MQ=255)

                                                                   cGATCAGGTTGTCACATCCACCAGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACt                     <  2:5927766/93‑1 (MQ=255)

                                                                     aTCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTgg                   >  2:1031886/1‑93 (MQ=255)

                                                                     aTCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTgg                   >  1:536686/1‑93 (MQ=255)

                                                                      tCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGgc                  >  1:4729623/1‑93 (MQ=255)

                                                                      tCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGgc                  >  1:4329701/1‑93 (MQ=255)

                                                                      tCCGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGgc                  >  1:2743984/1‑93 (MQ=255)

                                                                       ccGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCAGCTGCAACTGgcg                 >  1:1607927/1‑93 (MQ=255)

                                                                        cGGTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCAGATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGgcgc                >  1:6673747/1‑93 (MQ=255)

                                                                         ggTTGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCt               <  2:3705593/93‑1 (MQ=255)

                                                                           ttGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTgg             >  2:2622393/1‑93 (MQ=255)

                                                                           ttGTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTgg             <  1:657960/93‑1 (MQ=255)

                                                                             gTCACATCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGca           >  2:365896/1‑93 (MQ=255)

                                                                               cacaTCCACGCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGcaca         <  2:822874/93‑1 (MQ=255)

                                                                                acaTCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACAt        <  2:5204378/93‑1 (MQ=255)

                                                                                acaTCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACAt        <  1:4498900/93‑1 (MQ=255)

                                                                                acaTCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACAt        >  1:2316768/1‑93 (MQ=255)

                                                                                  aTCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATAc      <  1:38801/93‑1 (MQ=255)

                                                                                  aTCCACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATAc      >  1:2307799/1‑93 (MQ=255)

                                                                                    ccACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGc    <  2:1877595/93‑1 (MQ=255)

                                                                                    ccACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATAAGc    >  1:4013558/1‑93 (MQ=255)

                                                                                    ccACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTAAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGc    >  1:366484/1‑93 (MQ=255)

                                                                                     cACCCTTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCt   <  1:2403531/93‑1 (MQ=255)

                                                                                     cACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCt   <  2:5255191/93‑1 (MQ=255)

                                                                                     cACCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCt   >  2:1577769/1‑93 (MQ=255)

                                                                                      aCCCGTGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCTg  <  2:265557/93‑1 (MQ=255)

ATGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCATGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCTG  >  NC_000913/1059215‑1059393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`