BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,059,505	T→C	W343R (TGG→CGG)	torA →	trimethylamine N‑oxide reductase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,059,505	0	T	C	100.0%	722.7 / NA	222	W343R (TGG→CGG)	torA	trimethylamine N‑oxide reductase subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/115); total (107/115)

Only 100 of 229 total aligned reads displayed.

AAAAACTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTGCTGGC  >  NC_000913/1059415‑1059594

 aaaaCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACggg                                                                                        >  2:86885/1‑93 (MQ=255)

 aaaaCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACggg                                                                                        >  2:6644409/1‑93 (MQ=255)

  aaaCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGGCGCACGGGc                                                                                       >  2:1157923/1‑93 (MQ=255)

   accTTCCTTGCTAATTACTGTGGGGTTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCt                                                                                      <  1:1223376/91‑1 (MQ=255)

    aCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTg                                                                                     >  1:2669300/1‑93 (MQ=255)

    aCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTg                                                                                     >  2:4876464/1‑93 (MQ=255)

    aCTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTg                                                                                     >  1:1836707/1‑93 (MQ=255)

      ttCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGaa                                                                                   >  2:5269363/1‑93 (MQ=255)

          ttGCTAACTACTGTGTGGGTTTTGAGCAGTTCCGGCCGTAGCTGCTGGGTGTGAAAGTCGGTCAGCCGAAAGATGCCGCACGGGCTGTAAAAc                                                                               >  1:6727448/1‑93 (MQ=255)

           tGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACt                                                                              >  1:1485624/1‑93 (MQ=255)

            tcTATCTACGGGGTGTGTTTGGAGCAGTTGCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTg                                                                             <  1:5648640/92‑1 (MQ=255)

            gCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTg                                                                             <  2:4609549/93‑1 (MQ=255)

             cTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGa                                                                            <  1:504124/93‑1 (MQ=255)

              tAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGAc                                                                           <  2:6685787/93‑1 (MQ=255)

               aaCTATTGTGGGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGAcc                                                                          <  2:2008222/93‑1 (MQ=255)

               aaCTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGAcc                                                                          >  1:5550758/1‑93 (MQ=255)

               aaCTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGAcc                                                                          <  1:5220651/93‑1 (MQ=255)

               aaCTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGAcc                                                                          >  2:2478167/1‑93 (MQ=255)

                 ctactGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCgg                                                                        >  1:3474227/1‑93 (MQ=255)

                  tactGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGc                                                                       >  1:947368/1‑93 (MQ=255)

                  tactGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGc                                                                       >  1:355939/1‑93 (MQ=255)

                   actGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCa                                                                      <  1:519788/93‑1 (MQ=255)

                   actGTGTGGGTTTGGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCa                                                                      <  2:104050/93‑1 (MQ=255)

                     tgtgtgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCAtt                                                                    >  1:282209/1‑93 (MQ=255)

                       tgtgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGa                                                                  <  2:2739477/93‑1 (MQ=255)

                       tgtgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGa                                                                  >  1:1263232/1‑93 (MQ=255)

                        ttgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGAt                                                                 <  1:389506/92‑1 (MQ=255)

                        gtgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGAt                                                                 >  2:1631642/1‑93 (MQ=255)

                        gtgGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGAt                                                                 <  2:1236084/93‑1 (MQ=255)

                        gtgGGTATTGACCATTACCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGAt                                                                 <  1:1031886/93‑1 (MQ=255)

                          ggtttttGAGCAGTCCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGc                                                               <  2:2522728/90‑1 (MQ=255)

                          gggTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGc                                                               <  1:2562688/93‑1 (MQ=255)

                          gggTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGc                                                               <  1:1378485/93‑1 (MQ=255)

                            gTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCg                                                             >  2:490212/1‑93 (MQ=255)

                             ttttGAGCATTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGa                                                            <  2:4038560/93‑1 (MQ=255)

                             ttttGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGa                                                            >  1:362970/1‑93 (MQ=255)

                             ttttGACCACTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAACATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGa                                                            <  2:3163233/93‑1 (MQ=255)

                              tttGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGACGCCGaa                                                           >  2:2078986/1‑93 (MQ=255)

                                tGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAAc                                                         <  2:906260/93‑1 (MQ=255)

                                 gAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAAcc                                                        >  2:4815440/1‑93 (MQ=255)

                                   gCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCAt                                                      >  1:6116248/1‑93 (MQ=255)

                                   gCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCAt                                                      >  2:618930/1‑93 (MQ=255)

                                   gCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCAt                                                      >  1:3357104/1‑93 (MQ=255)

                                   gCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCAt                                                      >  2:4429975/1‑93 (MQ=255)

                                     ggtgccTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTc                                                    <  1:4749911/89‑1 (MQ=255)

                                     aGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTc                                                    >  1:3528973/1‑93 (MQ=255)

                                     aGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTc                                                    >  1:747658/1‑93 (MQ=255)

                                      gTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCg                                                   <  2:4210609/93‑1 (MQ=255)

                                         ccTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTgg                                                >  1:5924053/1‑93 (MQ=255)

                                          cTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTggg                                               <  2:350359/93‑1 (MQ=255)

                                           tGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGc                                              >  1:4845377/1‑93 (MQ=255)

                                           tGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGc                                              <  1:574061/93‑1 (MQ=255)

                                               gTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGgc                                          <  2:3928450/93‑1 (MQ=255)

                                               gTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGgc                                          <  1:3174336/93‑1 (MQ=255)

                                                 aTCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGgcgc                                        >  1:2266273/1‑93 (MQ=255)

                                                  tCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGCCCGGCATTGATGCCGAAACCATTCGTGGGCTGGcgcg                                       <  1:2994075/93‑1 (MQ=255)

                                                   ctgctgGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCgg                                      >  2:3000434/1‑93 (MQ=255)

                                                        gggTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGAt                                 >  1:4669466/1‑93 (MQ=255)

                                                        gggTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGAt                                 >  1:6391861/1‑93 (MQ=255)

                                                         ggTGAGAAAGCCGATCAGCCGAAAGATGCCGCACGGGCTGAAAGCCTGACCGGCGTTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATg                                <  1:1186253/93‑1 (MQ=255)

                                                         ggTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATg                                <  2:2805870/93‑1 (MQ=255)

                                                         ggTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATg                                >  1:2487386/1‑93 (MQ=255)

                                                          gTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATgg                               <  2:2309154/93‑1 (MQ=255)

                                                          gTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATgg                               <  2:5372674/93‑1 (MQ=255)

                                                          gTGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATgg                               <  2:4631408/93‑1 (MQ=255)

                                                           tGAGAAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATggc                              >  2:2911118/1‑93 (MQ=255)

                                                            gagaAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATggcg                             <  1:662053/93‑1 (MQ=255)

                                                             agaAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATggcgg                            >  1:4438163/1‑93 (MQ=255)

                                                              gaAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATggcggc                           <  1:1613919/93‑1 (MQ=255)

                                                              gaAAGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATACCGAAACCATTCGTGGGCTGGCGCGGCAGATggcggg                           >  1:4131831/1‑92 (MQ=255)

                                                                 aGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGaa                        >  2:5636636/1‑93 (MQ=255)

                                                                 aGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGaa                        <  1:892827/93‑1 (MQ=255)

                                                                 aGACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGaa                        >  1:5591205/1‑93 (MQ=255)

                                                                  gACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAAc                       <  2:5624022/93‑1 (MQ=255)

                                                                  gACGGTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAAc                       <  1:3870273/93‑1 (MQ=255)

                                                                     ggTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGa                    <  2:1678858/93‑1 (MQ=255)

                                                                     ggTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGa                    <  2:3264457/93‑1 (MQ=255)

                                                                     ggTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGa                    <  2:757744/93‑1 (MQ=255)

                                                                      gTCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGaa                   <  2:6529800/93‑1 (MQ=255)

                                                                       tCAGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAAc                  <  2:2614260/93‑1 (MQ=255)

                                                                         aGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGc                >  2:5919219/1‑93 (MQ=255)

                                                                         aGCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGc                >  2:3788494/1‑93 (MQ=255)

                                                                          gCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCa               >  2:3659648/1‑93 (MQ=255)

                                                                          gCCGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCa               >  1:6196080/1‑93 (MQ=255)

                                                                            cGAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCaaa             <  2:4329701/93‑1 (MQ=255)

                                                                             gAAAGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAat            >  2:4661254/1‑93 (MQ=255)

                                                                               aaGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAatta          >  1:5864904/1‑93 (MQ=255)

                                                                               aaGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAatta          >  2:5190046/1‑93 (MQ=255)

                                                                                aGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattat         >  2:5243687/1‑93 (MQ=255)

                                                                                aGATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattat         <  2:2398257/93‑1 (MQ=255)

                                                                                 gATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattatt        <  2:5835326/93‑1 (MQ=255)

                                                                                 gATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattatt        >  2:6098561/1‑93 (MQ=255)

                                                                                 gATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattatt        <  1:1966577/93‑1 (MQ=255)

                                                                                 gATGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattatt        >  2:1817068/1‑93 (MQ=255)

                                                                                 gATGCCGCACGGGATGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattatt        <  2:4714589/93‑1 (MQ=255)

                                                                                  aTGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAattattc       >  1:2159750/1‑92 (MQ=255)

                                                                                   tGCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTgc      <  2:6181562/93‑1 (MQ=255)

                                                                                    gCCGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTgct     <  1:1577769/93‑1 (MQ=255)

                                                                                      cGCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTgctgg   >  1:1739416/1‑93 (MQ=255)

                                                                                       gCACGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTgctggc  >  1:1455996/1‑93 (MQ=255)

AAAAACTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTGCTGGC  >  NC_000913/1059415‑1059594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`