BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,074,484	C→T	A1208T (GCC→ACC)	putA ←	proline dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,074,484	0	C	T	100.0%	632.7 / NA	179	A1208T (GCC→ACC)	putA	proline dehydrogenase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (88/91); total (88/91)

Only 100 of 196 total aligned reads displayed.

CGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTC  >  NC_000913/1074394‑1074572

cGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGa                                                                                        <  1:3328272/93‑1 (MQ=255)

  cTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGc                                                                                      >  1:1282712/1‑93 (MQ=255)

  cTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGc                                                                                      >  2:6288707/1‑93 (MQ=255)

  cTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGc                                                                                      <  2:2683225/93‑1 (MQ=255)

   tGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCt                                                                                     >  2:323366/1‑93 (MQ=255)

    gACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTg                                                                                    >  2:6711153/1‑93 (MQ=255)

       tGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGt                                                                                 >  2:5270955/1‑93 (MQ=255)

        gCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTc                                                                                <  1:5586666/93‑1 (MQ=255)

          cGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAg                                                                              <  1:4229251/93‑1 (MQ=255)

          cGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGACGGTGAGCTGAGTCAg                                                                              >  1:2517483/1‑93 (MQ=255)

           gATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAgc                                                                             >  2:4833143/1‑93 (MQ=255)

           gATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAgc                                                                             >  1:3812524/1‑93 (MQ=255)

            aTGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAgcg                                                                            >  1:5380374/1‑93 (MQ=255)

             tGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAgcgc                                                                           >  2:1437053/1‑93 (MQ=255)

              ggCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTCCCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCa                                                                          <  1:652959/93‑1 (MQ=255)

              ggCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCa                                                                          >  2:4596777/1‑93 (MQ=255)

              ggCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAATCAGCGCa                                                                          <  2:2196022/93‑1 (MQ=255)

                 aaTGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATcc                                                                       <  2:1164107/93‑1 (MQ=255)

                 aaTGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATcc                                                                       <  1:706138/93‑1 (MQ=255)

                  aTGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCt                                                                      >  2:1258714/1‑93 (MQ=255)

                  aTGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCt                                                                      >  2:3501335/1‑93 (MQ=255)

                   tGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTg                                                                     >  2:4019284/1‑93 (MQ=255)

                    gCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCAtgctgc                                                                    >  1:1028177/1‑93 (MQ=255)

                    gCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGc                                                                    >  2:5531917/1‑93 (MQ=255)

                    gCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGc                                                                    >  2:3171933/1‑93 (MQ=255)

                    gCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGc                                                                    <  1:1957977/93‑1 (MQ=255)

                        tCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCtcat                                                                <  1:359890/93‑1 (MQ=255)

                         cACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCtcatc                                                               >  2:3554425/1‑93 (MQ=255)

                          aCTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCCGCtcatca                                                              >  1:5053143/1‑93 (MQ=255)

                            tAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGCGCTGAGTCAGCGCATCCTGatcatcatc                                                            >  1:5860109/1‑93 (MQ=255)

                            aagcTGACGATGCAGCTCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCatcatc                                                            <  1:4535054/90‑1 (MQ=255)

                             aaCTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCg                                                           >  2:319938/1‑93 (MQ=255)

                             aaCTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCg                                                           >  2:3030127/1‑93 (MQ=255)

                             aaCTGACGATGCAGCGCGTCATCCGGCCACAGTAACTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCg                                                           >  1:4828157/1‑93 (MQ=255)

                               cTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGc                                                         <  1:260957/93‑1 (MQ=255)

                               cTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGc                                                         <  1:6371177/93‑1 (MQ=255)

                                  aCGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGAGGTGAGCTGAGTCAGCGCATACTGCTCATCATCGGCAAt                                                      >  2:5975178/1‑93 (MQ=255)

                                     aTGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATaca                                                   >  2:5195330/1‑93 (MQ=255)

                                     aTGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATaca                                                   <  2:670379/93‑1 (MQ=255)

                                         aGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACacaac                                               <  2:1053106/93‑1 (MQ=255)

                                          gcgcGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACacaaca                                              <  2:860025/93‑1 (MQ=255)

                                          gcgcGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACacaaca                                              <  2:735689/93‑1 (MQ=255)

                                          gcgcGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACacaaca                                              >  1:5004395/1‑93 (MQ=255)

                                          gcgcGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACacaaca                                              >  1:5447857/1‑93 (MQ=255)

                                           cgcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAacac                                             >  1:4170369/1‑93 (MQ=255)

                                           cgcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAacac                                             <  1:3056155/93‑1 (MQ=255)

                                            gcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcg                                            <  2:4575807/93‑1 (MQ=255)

                                            gcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcg                                            >  2:3633670/1‑93 (MQ=255)

                                            gcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcg                                            >  2:2847161/1‑93 (MQ=255)

                                            gcgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcg                                            >  1:293803/1‑93 (MQ=255)

                                             cgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcgc                                           >  1:3746862/1‑93 (MQ=255)

                                             cgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcgc                                           <  1:1985756/93‑1 (MQ=255)

                                             cgTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcgc                                           <  2:1503131/93‑1 (MQ=255)

                                              gTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcgcg                                          >  2:2000764/1‑93 (MQ=255)

                                               tCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCACTACACAACACgcgc                                         >  1:5691903/1‑93 (MQ=255)

                                               tCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACgcgc                                         >  1:319602/1‑93 (MQ=255)

                                                cATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGTAATACACAACACGCGCt                                        <  1:5597128/93‑1 (MQ=255)

                                                cATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCt                                        <  2:2012443/93‑1 (MQ=255)

                                                 aTCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTc                                       >  1:3917339/1‑93 (MQ=255)

                                                    cGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcg                                    >  1:2349299/1‑93 (MQ=255)

                                                    cGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcg                                    <  1:1183635/93‑1 (MQ=255)

                                                     ggCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcgc                                   <  2:2339886/93‑1 (MQ=255)

                                                     ggCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcgc                                   >  1:5976279/1‑93 (MQ=255)

                                                     ggCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcgc                                   <  2:6507539/93‑1 (MQ=255)

                                                      gCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCAcgcg                                  <  1:3336016/93‑1 (MQ=255)

                                                        cacaGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgc                                <  1:1243719/93‑1 (MQ=255)

                                                         acaGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgca                               >  2:4642142/1‑93 (MQ=255)

                                                          caGTGCCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcag                              <  2:696502/93‑1 (MQ=255)

                                                          caGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcag                              <  1:6628834/93‑1 (MQ=255)

                                                           aGTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcagc                             >  1:677823/1‑93 (MQ=255)

                                                            gTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcagca                            <  1:2459587/93‑1 (MQ=255)

                                                            gTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcagca                            <  2:544927/93‑1 (MQ=255)

                                                            gTACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcagca                            >  1:273451/1‑93 (MQ=255)

                                                             tACCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGcagcag                           <  1:3851099/93‑1 (MQ=255)

                                                              aCCTGGCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCagcagc                          <  2:3115114/93‑1 (MQ=255)

                                                                 cggCCGCCCACCGCGAGCGCGGCCGTGAGCTGAGTCAGCGCACCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTc                       <  1:279725/92‑1 (MQ=255)

                                                                  ggCTGCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTcc                      <  1:918427/93‑1 (MQ=255)

                                                                      gCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGgt                  <  2:1132319/93‑1 (MQ=255)

                                                                      gCCCACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGgt                  <  1:1100036/93‑1 (MQ=255)

                                                                       cccACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGgtg                 <  1:1513803/93‑1 (MQ=255)

                                                                        ccACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGgtgt                >  2:1042526/1‑93 (MQ=255)

                                                                        ccACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGgtgt                >  2:5165901/1‑93 (MQ=255)

                                                                         cACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATGCACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGtt               <  2:1552583/93‑1 (MQ=255)

                                                                         cACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGtt               >  2:4717759/1‑93 (MQ=255)

                                                                         cACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGtt               <  2:3903524/93‑1 (MQ=255)

                                                                         cACCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCACCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGtt               >  1:4078951/1‑93 (MQ=255)

                                                                         cACCGCCAGCACGGCGGTGAGCTGAGTAAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGtt               >  2:4417029/1‑93 (MQ=255)

                                                                          aCCGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTg              >  2:2314340/1‑93 (MQ=255)

                                                                           ccGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGc             <  1:2203432/93‑1 (MQ=255)

                                                                            cGCCAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCg            <  2:4199349/93‑1 (MQ=255)

                                                                              ccAGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGtt          >  2:5565740/1‑93 (MQ=255)

                                                                                aGCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCa        >  1:6032303/1‑93 (MQ=255)

                                                                                 gCACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCAc       >  2:6587637/1‑93 (MQ=255)

                                                                                  cACGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCAcc      <  2:4496301/93‑1 (MQ=255)

                                                                                   aCGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCAccc     <  2:4990371/93‑1 (MQ=255)

                                                                                   aCGGCGGTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCAccc     <  1:1578758/93‑1 (MQ=255)

                                                                                    cggcggTGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCg    <  1:1741175/93‑1 (MQ=255)

                                                                                     ggcggtGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGt   <  2:6339878/93‑1 (MQ=255)

                                                                                     ggcggtGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGt   <  2:4863191/93‑1 (MQ=255)

                                                                                      gcggtgAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTc  <  2:6034004/93‑1 (MQ=255)

CGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTC  >  NC_000913/1074394‑1074572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`