BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,099,277	T→C	Y139H (TAT→CAT)	ycdY →	putative oxidoreductase component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,099,277	0	T	C	100.0%	870.2 / NA	261	Y139H (TAT→CAT)	ycdY	putative oxidoreductase component
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (148/113); total (148/113)

Only 100 of 263 total aligned reads displayed.

CACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAACCCGC  >  NC_000913/1099187‑1099366

cacaTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCAt                                                                                         >  2:38508/1‑93 (MQ=255)

 acaTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATc                                                                                        <  1:6690865/93‑1 (MQ=255)

 acaTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATc                                                                                        <  1:5653365/93‑1 (MQ=255)

  caTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCt                                                                                       >  2:2525546/1‑93 (MQ=255)

  caTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCt                                                                                       <  1:923626/93‑1 (MQ=255)

   aTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTg                                                                                      >  2:6591813/1‑93 (MQ=255)

   aTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTg                                                                                      >  2:2310259/1‑93 (MQ=255)

   aTCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTg                                                                                      <  1:5230639/93‑1 (MQ=255)

    tCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGt                                                                                     >  2:5560405/1‑93 (MQ=255)

     cGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGtt                                                                                    >  2:4711721/1‑93 (MQ=255)

     cGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGtt                                                                                    <  1:3225697/93‑1 (MQ=255)

      ggCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTa                                                                                   <  1:1167635/93‑1 (MQ=255)

      ggCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTa                                                                                   <  2:1153564/93‑1 (MQ=255)

       gCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTAc                                                                                  >  1:5527871/1‑93 (MQ=255)

         acaTTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTAccc                                                                                >  1:6150746/1‑93 (MQ=255)

         acaTTGCTGCTCGCAGCTTCCTGGCTCGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTAccc                                                                                <  1:1799575/93‑1 (MQ=255)

          caTTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCt                                                                               >  2:6036342/1‑93 (MQ=255)

          caTTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCt                                                                               >  2:4850061/1‑93 (MQ=255)

           aTTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtg                                                                              >  1:3604146/1‑93 (MQ=255)

             tgctgcTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggt                                                                            <  1:3860429/93‑1 (MQ=255)

              gctgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtg                                                                           <  2:646258/93‑1 (MQ=255)

               ctgctCGCAGCTTCCTGGCTGGAACATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgt                                                                          <  1:3038485/93‑1 (MQ=255)

                tgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgtg                                                                         <  2:1903966/93‑1 (MQ=255)

                tgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgtg                                                                         >  1:2141865/1‑93 (MQ=255)

                tgctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgtg                                                                         >  1:4123910/1‑93 (MQ=255)

                 gctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgtgg                                                                        <  1:2346234/93‑1 (MQ=255)

                  ctCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCtggtgtggt                                                                       >  1:1080646/1‑93 (MQ=255)

                    cGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGc                                                                     >  2:3686151/1‑93 (MQ=255)

                    cGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGc                                                                     <  1:6344788/93‑1 (MQ=255)

                     gCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCg                                                                    <  2:5384036/93‑1 (MQ=255)

                     gCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCg                                                                    >  2:3626669/1‑93 (MQ=255)

                       aGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGtt                                                                  >  2:2837782/1‑93 (MQ=255)

                       aGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGtt                                                                  <  1:6609073/93‑1 (MQ=255)

                        gCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTc                                                                 >  1:2943977/1‑93 (MQ=255)

                        gCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTc                                                                 >  2:4040662/1‑93 (MQ=255)

                        gCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTc                                                                 >  2:6420020/1‑93 (MQ=255)

                         cTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTcc                                                                >  2:3482852/1‑93 (MQ=255)

                         cTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTcc                                                                <  1:595223/93‑1 (MQ=255)

                         cTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTcc                                                                <  2:6535210/93‑1 (MQ=255)

                           tCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCtt                                                              <  2:3004575/93‑1 (MQ=255)

                             ctggctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTgg                                                            <  1:1927153/93‑1 (MQ=255)

                                gctggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCaa                                                         <  1:5211518/93‑1 (MQ=255)

                                  tggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAg                                                       >  2:143847/1‑93 (MQ=255)

                                  tggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAg                                                       <  2:3541170/93‑1 (MQ=255)

                                  tggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAg                                                       >  1:4316308/1‑93 (MQ=255)

                                   ggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGt                                                      >  2:4127794/1‑93 (MQ=255)

                                   ggAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGt                                                      >  1:3305085/1‑93 (MQ=255)

                                    gAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTg                                                     >  2:1387286/1‑93 (MQ=255)

                                    gAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTg                                                     <  2:5362722/93‑1 (MQ=255)

                                     aaGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTgg                                                    <  1:3526599/93‑1 (MQ=255)

                                     aaGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTgg                                                    <  1:2056261/93‑1 (MQ=255)

                                      aGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGa                                                   >  2:2959741/1‑93 (MQ=255)

                                        aTCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAgg                                                 <  1:3909354/93‑1 (MQ=255)

                                         tCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGc                                                <  1:5760014/93‑1 (MQ=255)

                                            gTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCTTGGGGTGGGGCGTTCCTTGGCAAAGTGAGGGccct                                             >  2:4817882/1‑92 (MQ=255)

                                            gTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCa                                             <  2:4461034/93‑1 (MQ=255)

                                            gTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCa                                             >  2:4632961/1‑93 (MQ=255)

                                                aCGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCa                                         >  1:1981835/1‑93 (MQ=255)

                                                 cGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCaa                                        >  1:153326/1‑93 (MQ=255)

                                                  ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAAc                                       >  1:441501/1‑93 (MQ=255)

                                                  ggAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAAc                                       <  2:2630105/93‑1 (MQ=255)

                                                   gAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAAcc                                      >  2:955192/1‑93 (MQ=255)

                                                   gAAGATGAGAGCGAAGCACTGGAAACACTGGTCAGCGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAAcc                                      >  1:4545642/1‑93 (MQ=255)

                                                     aGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCAc                                    <  2:2027665/93‑1 (MQ=255)

                                                      gATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACg                                   >  1:4784033/1‑93 (MQ=255)

                                                       aTGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGc                                  >  2:3093397/1‑93 (MQ=255)

                                                        tGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGcc                                 >  1:2683799/1‑93 (MQ=255)

                                                        tGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGcc                                 >  1:5606351/1‑93 (MQ=255)

                                                         gagaGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTCCCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCt                                <  1:3127700/93‑1 (MQ=255)

                                                         gagaGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCt                                <  1:582771/93‑1 (MQ=255)

                                                         gagaGCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCt                                <  2:5482667/93‑1 (MQ=255)

                                                            agCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTc                             >  2:4493990/1‑93 (MQ=255)

                                                             gCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCt                            <  1:6177615/93‑1 (MQ=255)

                                                             gCGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCt                            <  1:5324562/93‑1 (MQ=255)

                                                              cGAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTg                           <  2:6299402/93‑1 (MQ=255)

                                                               gAAGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTgg                          >  2:3428452/1‑93 (MQ=255)

                                                                aaGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGgc                         >  1:3794053/1‑93 (MQ=255)

                                                                aaGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGgc                         >  1:349169/1‑93 (MQ=255)

                                                                 aGCACTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGgcg                        >  2:4673878/1‑93 (MQ=255)

                                                                    aCTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCAc                     >  1:250383/1‑93 (MQ=255)

                                                                     cTGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCAcc                    >  2:2429688/1‑93 (MQ=255)

                                                                      tGGAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCa                   >  1:6222036/1‑93 (MQ=255)

                                                                       ggAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCAt                  >  2:2728146/1‑93 (MQ=255)

                                                                       ggAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCAt                  >  2:826994/1‑93 (MQ=255)

                                                                       ggAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCAt                  <  2:1694543/93‑1 (MQ=255)

                                                                        gAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATg                 <  2:5126369/93‑1 (MQ=255)

                                                                        gAAACACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATg                 <  1:687305/93‑1 (MQ=255)

                                                                          aaCACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGc               >  1:5834849/1‑93 (MQ=255)

                                                                          aaCACTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGc               >  1:4956862/1‑93 (MQ=255)

                                                                           acacTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCa              >  1:5548991/1‑93 (MQ=255)

                                                                           acacTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCa              >  2:5837421/1‑93 (MQ=255)

                                                                           acacTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCa              >  2:3274291/1‑93 (MQ=255)

                                                                            cacTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCAc             >  1:1312091/1‑93 (MQ=255)

                                                                             acTGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCAcc            <  1:4069726/93‑1 (MQ=255)

                                                                               tGTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGc          <  2:1176700/93‑1 (MQ=255)

                                                                                gTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCt         >  2:3230971/1‑93 (MQ=255)

                                                                                gTTCAGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCt         >  1:531346/1‑93 (MQ=255)

                                                                                    aGTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAAcc     >  2:4170238/1‑93 (MQ=255)

                                                                                     gTGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAAccc    >  1:1684365/1‑93 (MQ=255)

                                                                                      tGAGCATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAACCcg   <  2:805754/93‑1 (MQ=255)

CACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAACCCGC  >  NC_000913/1099187‑1099366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`