BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,125,352	T→C	W190R (TGG→CGG)	rimJ →	acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,125,352	0	T	C	100.0%	707.4 / NA	216	W190R (TGG→CGG)	rimJ	acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/109); total (107/109)

Only 100 of 220 total aligned reads displayed.

GGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT  >  NC_000913/1125262‑1125441

ggTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCgg                                                                                         >  1:1478738/1‑93 (MQ=255)

ggTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCgg                                                                                         <  2:2407604/93‑1 (MQ=255)

 gTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGa                                                                                        <  1:3496489/93‑1 (MQ=255)

  ttttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGAc                                                                                       <  1:5613593/93‑1 (MQ=255)

    ttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGc                                                                                     <  1:5011332/93‑1 (MQ=255)

    ttGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGc                                                                                     <  2:3007450/93‑1 (MQ=255)

     tGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGcc                                                                                    <  1:1138695/93‑1 (MQ=255)

     tGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGcc                                                                                    <  2:5896446/93‑1 (MQ=255)

     tGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGcc                                                                                    <  1:2624914/93‑1 (MQ=255)

       aaaaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCg                                                                                  >  2:1532238/1‑93 (MQ=255)

       aaaaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCg                                                                                  <  2:2021808/93‑1 (MQ=255)

       aaaaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCg                                                                                  >  2:3108116/1‑93 (MQ=255)

        aaaaGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGccccg                                                                                 >  2:1415537/1‑91 (MQ=255)

          aagaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGcc                                                                               >  2:4060442/1‑93 (MQ=255)

            gaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGc                                                                             <  1:423934/93‑1 (MQ=255)

            gaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGc                                                                             <  1:2991740/93‑1 (MQ=255)

            gaagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGc                                                                             >  1:38349/1‑93 (MQ=255)

             aagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCt                                                                            >  1:998704/1‑93 (MQ=255)

             aagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCt                                                                            <  2:1299224/93‑1 (MQ=255)

             aagGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCt                                                                            <  2:769085/93‑1 (MQ=255)

              agGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTa                                                                           >  1:1095241/1‑93 (MQ=255)

               ggCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTaa                                                                          <  1:4013105/93‑1 (MQ=255)

               ggCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTaa                                                                          >  1:4066282/1‑93 (MQ=255)

               ggCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTaa                                                                          >  1:5431678/1‑93 (MQ=255)

                 cTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAgg                                                                        <  2:3949050/93‑1 (MQ=255)

                   aTGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGgag                                                                      >  2:1972793/1‑93 (MQ=255)

                     gCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGaa                                                                    >  2:6599710/1‑93 (MQ=255)

                     gCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGaa                                                                    >  2:433874/1‑93 (MQ=255)

                     gCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGaa                                                                    <  2:386533/93‑1 (MQ=255)

                      cGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAt                                                                   <  1:3740826/93‑1 (MQ=255)

                      cGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAt                                                                   <  2:5554002/93‑1 (MQ=255)

                       gAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtc                                                                  >  2:3841929/1‑93 (MQ=255)

                       gAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtc                                                                  >  2:2336838/1‑93 (MQ=255)

                       gAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtc                                                                  <  1:6087815/93‑1 (MQ=255)

                       gAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtc                                                                  <  2:5823191/93‑1 (MQ=255)

                        aaaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtct                                                                 >  1:6505344/1‑93 (MQ=255)

                         aaGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAAtctc                                                                >  1:5240844/1‑93 (MQ=255)

                          aGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGGATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCa                                                               >  2:4535504/1‑93 (MQ=255)

                          aGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCa                                                               >  2:1854675/1‑93 (MQ=255)

                             cTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGa                                                            >  2:649820/1‑93 (MQ=255)

                              tATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaa                                                           >  1:6152045/1‑93 (MQ=255)

                               aTCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaaa                                                          <  2:4765795/93‑1 (MQ=255)

                               aTCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGaaa                                                          >  2:5752977/1‑93 (MQ=255)

                                tCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAat                                                         >  1:5503936/1‑93 (MQ=255)

                                 cTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAata                                                        <  2:6163716/93‑1 (MQ=255)

                                  tGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAatat                                                       >  2:4662069/1‑93 (MQ=255)

                                  tGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAatat                                                       <  2:4598721/93‑1 (MQ=255)

                                  tGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAatat                                                       >  2:4150291/1‑93 (MQ=255)

                                   gTTGATTGATGGAGAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATc                                                      <  1:2101763/93‑1 (MQ=255)

                                    ttgattgaTGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCAGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCa                                                     <  2:2478524/93‑1 (MQ=255)

                                     tgattgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCaa                                                    <  1:3235905/93‑1 (MQ=255)

                                       attgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACt                                                  >  1:632773/1‑93 (MQ=255)

                                        ttgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACtt                                                 >  2:6046013/1‑93 (MQ=255)

                                        ttgatGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACtt                                                 >  1:1008108/1‑93 (MQ=255)

                                           atGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACt                                              <  1:2793271/93‑1 (MQ=255)

                                           atGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACt                                              <  1:574756/93‑1 (MQ=255)

                                            tGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTg                                             >  2:4006745/1‑93 (MQ=255)

                                            tGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTg                                             >  1:2896048/1‑93 (MQ=255)

                                               aCAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGccc                                          <  1:5323555/93‑1 (MQ=255)

                                               aCAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGccc                                          <  1:1272003/93‑1 (MQ=255)

                                                cAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCt                                         >  2:2891760/1‑93 (MQ=255)

                                                cAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCt                                         <  1:1563603/93‑1 (MQ=255)

                                                cAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCt                                         >  1:6684668/1‑93 (MQ=255)

                                                 aaTGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCtt                                        >  1:1384694/1‑93 (MQ=255)

                                                 aaTGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCtt                                        <  1:5880398/93‑1 (MQ=255)

                                                  aTGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTg                                       >  2:4288888/1‑93 (MQ=255)

                                                   tGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGa                                      <  1:5122915/93‑1 (MQ=255)

                                                      cgcgATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGc                                   <  1:3852690/93‑1 (MQ=255)

                                                       gcgATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCt                                  <  1:1809086/93‑1 (MQ=255)

                                                       gcgATCACGTACTGACGGCATTAACTACCCCAGACCAGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCt                                  >  1:4474342/1‑93 (MQ=255)

                                                         gATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTcg                                >  1:6249434/1‑93 (MQ=255)

                                                         gATCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTcg                                <  1:1751046/93‑1 (MQ=255)

                                                          aTCACGTACTGACGGCATTACCTACCCCAGACGGGACGCCCGCCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTcgc                               <  1:3929318/93‑1 (MQ=255)

                                                           tCACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTcgcg                              >  2:1045515/1‑93 (MQ=255)

                                                            cACGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGATCGCGt                             >  2:161891/1‑93 (MQ=255)

                                                             aCGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATATCATGAAATATCAACTTACTGCCCTTGCAGCTCGCGTg                            >  2:5256060/1‑93 (MQ=255)

                                                              cGTACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGa                           >  2:260985/1‑93 (MQ=255)

                                                                tACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAtt                         >  1:3106444/1‑93 (MQ=255)

                                                                tACTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAtt                         >  2:2090112/1‑93 (MQ=255)

                                                                 aCTGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTg                        >  2:4957756/1‑93 (MQ=255)

                                                                   tGACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGt                      <  1:4511661/93‑1 (MQ=255)

                                                                    gACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGtt                     <  2:3437671/93‑1 (MQ=255)

                                                                    gACGGCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGtt                     >  1:6284207/1‑93 (MQ=255)

                                                                       gttaTTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgct                  <  1:5305436/90‑1 (MQ=255)

                                                                       ggCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCACCTTACTGCCCTTGAAGCTCGCGTGATTGGttgct                  <  2:5073146/93‑1 (MQ=255)

                                                                       ggCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgct                  <  2:3414667/93‑1 (MQ=255)

                                                                       ggCATTAACTACCCCAGACCAGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgct                  <  2:2856885/93‑1 (MQ=255)

                                                                        gCATTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGAGTGGttgctt                 >  2:514961/1‑93 (MQ=255)

                                                                          aTTAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGttgcttgc               >  2:1185458/1‑93 (MQ=255)

                                                                            tAACTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTg             <  2:337151/93‑1 (MQ=255)

                                                                               cTACCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaa          <  1:4735099/93‑1 (MQ=255)

                                                                                 aCCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaaa        >  1:2172811/1‑93 (MQ=255)

                                                                                 aCCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaaa        <  1:6037246/93‑1 (MQ=255)

                                                                                 aCCCCAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGaaaa        <  1:2243427/93‑1 (MQ=255)

                                                                                  ccccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAg       <  2:5990970/93‑1 (MQ=255)

                                                                                   cccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGc      <  1:5208318/93‑1 (MQ=255)

                                                                                    ccAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCa     >  1:2398211/1‑93 (MQ=255)

                                                                                     cAGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAg    >  1:1202203/1‑93 (MQ=255)

                                                                                      aGACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAgg   <  2:6272100/93‑1 (MQ=255)

                                                                                       gACCGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGt  <  2:1332282/93‑1 (MQ=255)

GGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAAGGAGAATCTCATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGT  >  NC_000913/1125262‑1125441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`