BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,147,973	T→C	intergenic (+59/‑9)	plsX → / → fabH	PlsX/3‑oxoacyl‑[acyl‑carrier‑protein] synthase III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,147,973	0	T	C	100.0%	785.9 / NA	240	intergenic (+59/‑9)	plsX/fabH	PlsX/3‑oxoacyl‑[acyl‑carrier‑protein] synthase III
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (103/137); total (103/137)

Only 100 of 245 total aligned reads displayed.

TGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGAC  >  NC_000913/1147883‑1148062

tgGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGa                                                                                         <  1:5412401/93‑1 (MQ=255)

tgGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGa                                                                                         <  2:4087466/93‑1 (MQ=255)

 ggACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAg                                                                                        >  1:1578095/1‑93 (MQ=255)

 ggACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAg                                                                                        <  1:3647772/93‑1 (MQ=255)

 ggACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAg                                                                                        <  2:5794571/93‑1 (MQ=255)

 ggACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAg                                                                                        >  2:4964368/1‑93 (MQ=255)

  gACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGc                                                                                       <  1:1314225/93‑1 (MQ=255)

     ggTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTa                                                                                    >  2:2646432/1‑93 (MQ=255)

      gtagCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTAc                                                                                   <  1:2663503/90‑1 (MQ=255)

       tcgCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACa                                                                                  <  2:3305849/91‑1 (MQ=255)

       tGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACa                                                                                  <  2:1940288/93‑1 (MQ=255)

       tGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACa                                                                                  <  2:6173853/93‑1 (MQ=255)

       tGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACa                                                                                  <  2:2090212/93‑1 (MQ=255)

        ggCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACAt                                                                                 <  1:1960403/93‑1 (MQ=255)

        ggCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACAt                                                                                 <  2:5027209/93‑1 (MQ=255)

        ggCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACAt                                                                                 >  2:548666/1‑93 (MQ=255)

          cAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGt                                                                               <  2:652500/93‑1 (MQ=255)

           aaaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGta                                                                              <  1:3536368/93‑1 (MQ=255)

           aaaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGta                                                                              >  2:3403239/1‑93 (MQ=255)

            aaaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGtat                                                                             >  2:6582083/1‑93 (MQ=255)

             aaGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGtata                                                                            <  2:3033986/93‑1 (MQ=255)

               gCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACg                                                                          <  2:2540966/93‑1 (MQ=255)

               gCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACg                                                                          >  2:4716753/1‑93 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        <  1:3145648/93‑1 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        <  2:3161556/93‑1 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        <  2:5168588/93‑1 (MQ=255)

                 ggAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGaa                                                                        >  1:4393974/1‑93 (MQ=255)

                  gAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAg                                                                       >  2:947335/1‑93 (MQ=255)

                     ctctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatt                                                                    <  2:6099632/93‑1 (MQ=255)

                     ctctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatt                                                                    <  1:5497033/93‑1 (MQ=255)

                      tctGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGatta                                                                   <  1:5289227/93‑1 (MQ=255)

                        tGCGGTAGCAGTACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGattatt                                                                 <  1:6708222/93‑1 (MQ=255)

                         gCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTg                                                                <  2:4531944/93‑1 (MQ=255)

                             tAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTAc                                                            <  2:2816050/93‑1 (MQ=255)

                             tAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTAc                                                            >  2:4408682/1‑93 (MQ=255)

                              aGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACt                                                           <  1:3561723/93‑1 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          <  2:2270824/93‑1 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          >  2:6249305/1‑93 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          <  2:1662710/93‑1 (MQ=255)

                               gCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTg                                                          >  1:492302/1‑93 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        <  1:5936866/93‑1 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        <  1:615071/93‑1 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        <  1:4427480/93‑1 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        >  1:4464760/1‑93 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGc                                                        >  1:4555604/1‑93 (MQ=255)

                                 aGGACGCTGCCAGCGAACTCGCAGGTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACttgt                                                        >  1:4134749/1‑90 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       <  1:2409486/93‑1 (MQ=255)

                                  ggACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCa                                                       >  2:447648/1‑93 (MQ=255)

                                   gACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATAAAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAg                                                      <  2:1999082/93‑1 (MQ=255)

                                     cGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCt                                                    >  2:1887689/1‑93 (MQ=255)

                                      gCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTa                                                   <  2:3017683/93‑1 (MQ=255)

                                        tGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATc                                                 <  2:1059061/93‑1 (MQ=255)

                                        tGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATc                                                 <  1:1848583/93‑1 (MQ=255)

                                          ccAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCtc                                               >  2:6010148/1‑92 (MQ=255)

                                          ccAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTg                                               <  1:2144414/93‑1 (MQ=255)

                                            aGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGcc                                             >  2:6034441/1‑93 (MQ=255)

                                             gCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGccc                                            <  2:3786039/93‑1 (MQ=255)

                                                 aCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAAc                                        >  2:1727357/1‑93 (MQ=255)

                                                 aCTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAAc                                        >  1:2083061/1‑93 (MQ=255)

                                                  cTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACa                                       <  1:1051679/93‑1 (MQ=255)

                                                  cTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACa                                       <  1:6481439/93‑1 (MQ=255)

                                                   tCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACaa                                      <  2:6280538/93‑1 (MQ=255)

                                                   tCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACaa                                      >  1:1359732/1‑93 (MQ=255)

                                                    cGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAg                                     <  1:5597815/93‑1 (MQ=255)

                                                     gCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGt                                    >  1:4715271/1‑93 (MQ=255)

                                                      cAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTg                                   <  1:5469355/93‑1 (MQ=255)

                                                       aGTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGc                                  <  2:1248855/93‑1 (MQ=255)

                                                        gTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCg                                 >  1:4822002/1‑93 (MQ=255)

                                                        gTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCg                                 >  2:6315720/1‑93 (MQ=255)

                                                        gTTTGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCg                                 >  1:2459702/1‑93 (MQ=255)

                                                         tttGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCgg                                >  2:1389341/1‑93 (MQ=255)

                                                          ttGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGa                               <  2:5271153/93‑1 (MQ=255)

                                                          ttGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGa                               <  1:2914596/93‑1 (MQ=255)

                                                           tGCAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGAc                              <  2:2276678/93‑1 (MQ=255)

                                                             cAAGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaa                            <  2:788686/93‑1 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           >  2:3968541/1‑93 (MQ=255)

                                                              aaGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACaaa                           <  1:5482053/93‑1 (MQ=255)

                                                               aGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAAc                          <  2:4301548/93‑1 (MQ=255)

                                                               aGTGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAAc                          <  2:6428120/93‑1 (MQ=255)

                                                                 tGACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGc                        <  1:1741373/93‑1 (MQ=255)

                                                                  gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGcc                       <  1:1602891/93‑1 (MQ=255)

                                                                  gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGcc                       <  1:307245/93‑1 (MQ=255)

                                                                  gACGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGcc                       <  1:3901753/93‑1 (MQ=255)

                                                                   aCGGTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCg                      <  2:2689451/93‑1 (MQ=255)

                                                                      gTATATAACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGAtt                   <  2:4843120/93‑1 (MQ=255)

                                                                       tatataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGAttt                  <  1:3941596/93‑1 (MQ=255)

                                                                        atataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTg                 <  1:4513236/93‑1 (MQ=255)

                                                                        atataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTg                 <  1:2819296/93‑1 (MQ=255)

                                                                          ataACCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGa               <  2:2949333/93‑1 (MQ=255)

                                                                             aCCGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaa            >  2:6638069/1‑93 (MQ=255)

                                                                              ccGAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGaaaaa           <  1:3471661/93‑1 (MQ=255)

                                                                                gAAAAGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAt         <  1:4287612/93‑1 (MQ=255)

                                                                                 aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtg        <  1:2331541/93‑1 (MQ=255)

                                                                                 aaaaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtg        >  1:464531/1‑93 (MQ=255)

                                                                                   aaGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggg      >  1:1667394/1‑92 (MQ=255)

                                                                                    aGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggtg     <  2:5005158/93‑1 (MQ=255)

                                                                                    aGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggtg     <  1:6082596/93‑1 (MQ=255)

                                                                                    aGTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggtg     >  1:26027/1‑93 (MQ=255)

                                                                                     gTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggtgg    <  2:3426159/93‑1 (MQ=255)

                                                                                     gTGACCGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAAtggtgg    <  1:3214828/93‑1 (MQ=255)

TGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCTGCCAGCGAACTCGCAGTTTGCAAGTGACGGTATATAACCGAAAAGTGACTGAGCGTACATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGAC  >  NC_000913/1147883‑1148062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`