BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,170,138	A→G	I1017T (ATC→ACC)	mfd ←	transcription‑repair coupling mutation frequency decline

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,170,138	0	A	G	100.0%	723.9 / NA	221	I1017T (ATC→ACC)	mfd	transcription‑repair coupling mutation frequency decline
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (115/106); total (115/106)

Only 100 of 237 total aligned reads displayed.

ATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTCCGGCT  >  NC_000913/1170048‑1170227

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         <  1:5016311/93‑1 (MQ=255)

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         >  2:2521072/1‑93 (MQ=255)

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         <  2:5045239/93‑1 (MQ=255)

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         >  1:4291940/1‑93 (MQ=255)

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         <  2:3611210/93‑1 (MQ=255)

atAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTg                                                                                         >  1:2034394/1‑93 (MQ=255)

 tAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTTGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGa                                                                                        >  1:2331888/1‑93 (MQ=255)

 tAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGa                                                                                        >  2:198572/1‑93 (MQ=255)

 tAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGCTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGa                                                                                        >  2:6560327/1‑93 (MQ=255)

  aaGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGaa                                                                                       <  1:2526781/93‑1 (MQ=255)

   aGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGaaa                                                                                      <  2:647506/93‑1 (MQ=255)

    gCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAat                                                                                     >  1:228857/1‑93 (MQ=255)

    gCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAat                                                                                     <  2:5263521/93‑1 (MQ=255)

     cTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAatc                                                                                    >  1:1033131/1‑93 (MQ=255)

      tCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAatca                                                                                   <  1:4488368/93‑1 (MQ=255)

        gACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCGATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAatcatc                                                                                 >  1:6104793/1‑93 (MQ=255)

        gACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAatcatc                                                                                 <  1:3826328/93‑1 (MQ=255)

         aCTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCt                                                                                <  1:1837789/93‑1 (MQ=255)

         aCTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCt                                                                                <  2:3364906/93‑1 (MQ=255)

          cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTg                                                                               <  2:5757206/93‑1 (MQ=255)

           tttGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTgg                                                                              >  1:1915282/1‑93 (MQ=255)

           tttGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTgg                                                                              >  1:6516685/1‑93 (MQ=255)

             tGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCa                                                                            <  2:6038931/93‑1 (MQ=255)

             tGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCa                                                                            >  2:236428/1‑93 (MQ=255)

             tGATCTCTTCCAGCTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTCGCa                                                                            >  1:2429894/1‑93 (MQ=255)

              gATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCaa                                                                           >  2:5012584/1‑93 (MQ=255)

              gATCTCTTCCAGTTAGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCaa                                                                           <  1:5310732/93‑1 (MQ=255)

               aTCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAAt                                                                          >  1:2593793/1‑93 (MQ=255)

                tctcTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATa                                                                         <  2:5321831/93‑1 (MQ=255)

                tctcTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATa                                                                         <  1:5983503/93‑1 (MQ=255)

                tctcTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATa                                                                         <  2:5486530/93‑1 (MQ=255)

                tctcTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATa                                                                         >  2:2898475/1‑93 (MQ=255)

                 ctctTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAg                                                                        <  2:3098485/93‑1 (MQ=255)

                  tctTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGc                                                                       >  2:1842440/1‑93 (MQ=255)

                  tctTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGc                                                                       >  2:3991765/1‑93 (MQ=255)

                  tctTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGc                                                                       <  2:6191353/93‑1 (MQ=255)

                  cctTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGc                                                                       <  1:1446617/92‑1 (MQ=255)

                    ttCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGa                                                                     >  1:1139110/1‑93 (MQ=255)

                     tCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGAc                                                                    >  2:4230761/1‑93 (MQ=255)

                       cAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACgg                                                                  <  2:1228172/93‑1 (MQ=255)

                        aGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGc                                                                 >  2:1654875/1‑93 (MQ=255)

                         gTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGGAATCATCTGGCAATAGCGACGGCa                                                                >  1:3601497/1‑93 (MQ=255)

                         gTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCa                                                                >  2:4116210/1‑93 (MQ=255)

                          ttCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCAt                                                               >  2:1453092/1‑93 (MQ=255)

                          ttCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCAt                                                               >  2:4651952/1‑93 (MQ=255)

                          ttCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGGGAAATCATCTGGCAATAGCGACGGCac                                                               >  1:1551920/1‑92 (MQ=255)

                           tCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGTAATCATCTGGCACTAGCGGCGGCATc                                                              >  1:510600/1‑93 (MQ=255)

                           tCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATc                                                              <  2:2053728/93‑1 (MQ=255)

                            cGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATcc                                                             <  2:6324555/93‑1 (MQ=255)

                            cGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATcc                                                             <  1:1195539/93‑1 (MQ=255)

                             gTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCg                                                            >  1:4409282/1‑93 (MQ=255)

                              ttttCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGc                                                           <  1:3690597/93‑1 (MQ=255)

                              ttttCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGc                                                           >  1:4604820/1‑93 (MQ=255)

                              ttttCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGAGCAATCATCTGGCAATAGCGACGGCATCCga                                                           >  1:979010/1‑92 (MQ=255)

                                 tCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGc                                                        >  1:6296448/1‑93 (MQ=255)

                                  ccGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCt                                                       <  2:1322580/93‑1 (MQ=255)

                                    gTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCg                                                     >  1:5184609/1‑93 (MQ=255)

                                     ttttGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCgc                                                    >  1:2803002/1‑92 (MQ=255)

                                      tttGGCTCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGAc                                                   <  1:1686785/93‑1 (MQ=255)

                                      tttGGCGCTGGCAATACGTTTGTAGAGCGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGAc                                                   <  2:1056351/93‑1 (MQ=255)

                                            gcTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGt                                             <  1:3481008/93‑1 (MQ=255)

                                            gcTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGt                                             <  1:3415417/93‑1 (MQ=255)

                                             cTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGtt                                            <  1:6376570/93‑1 (MQ=255)

                                             cTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGtt                                            >  1:2106512/1‑93 (MQ=255)

                                             cTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGtt                                            <  1:5740676/93‑1 (MQ=255)

                                             cTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGtt                                            >  2:555031/1‑93 (MQ=255)

                                               ggCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTg                                          >  2:4345878/1‑93 (MQ=255)

                                                gCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgc                                         >  2:1286255/1‑93 (MQ=255)

                                                  aaTACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctg                                       <  1:3001345/93‑1 (MQ=255)

                                                  aaTACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctg                                       >  2:5971554/1‑93 (MQ=255)

                                                  aaTACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctg                                       <  1:949145/93‑1 (MQ=255)

                                                    tACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctggc                                     >  1:4156676/1‑93 (MQ=255)

                                                      cGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctggctg                                   <  1:35542/93‑1 (MQ=255)

                                                      cGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTgctggctg                                   >  1:873908/1‑93 (MQ=255)

                                                       gTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGctggctgg                                  <  1:4115308/93‑1 (MQ=255)

                                                       gTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGctggctgg                                  >  1:5791092/1‑93 (MQ=255)

                                                          tGTAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTga                               <  2:4539618/93‑1 (MQ=255)

                                                            tAGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTgaga                             <  1:1942014/93‑1 (MQ=255)

                                                             aGAACGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGAt                            >  1:2172185/1‑93 (MQ=255)

                                                              aaaCGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATc                           <  2:1117337/92‑1 (MQ=255)

                                                               aaCGACAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCt                          <  2:4446917/93‑1 (MQ=255)

                                                                   aCAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTTCa                      >  2:5665320/1‑93 (MQ=255)

                                                                   aCAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCa                      <  2:660227/93‑1 (MQ=255)

                                                                   aCAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCa                      >  2:1677088/1‑93 (MQ=255)

                                                                    cAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTTCAg                     >  2:5889120/1‑93 (MQ=255)

                                                                    cAGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAg                     >  2:876507/1‑93 (MQ=255)

                                                                    cAGACGCGTGTTCACATCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAg                     <  2:3163832/93‑1 (MQ=255)

                                                                     aGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGc                    <  1:4943374/93‑1 (MQ=255)

                                                                     aGACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGc                    >  2:818363/1‑93 (MQ=255)

                                                                      gACGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCg                   >  1:5706799/1‑93 (MQ=255)

                                                                       aCGCGTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTCAGATCTTCCAGCgc                  >  2:3222075/1‑92 (MQ=255)

                                                                        cgcgTGTTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGAc                 >  1:699790/1‑93 (MQ=255)

                                                                           gtgtTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGc              <  1:5474679/93‑1 (MQ=255)

                                                                           gtgtTCACGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGc              >  1:433485/1‑93 (MQ=255)

                                                                                 aCGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGt        <  2:3865127/93‑1 (MQ=255)

                                                                                  cGTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTc       <  1:2764295/93‑1 (MQ=255)

                                                                                   gTCAGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTcc      <  1:28427/93‑1 (MQ=255)

                                                                                      aGGGGTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTCCGGc   <  2:4810025/93‑1 (MQ=255)

                                                                                       ggggTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTCCGGCt  <  1:3539689/93‑1 (MQ=255)

                                                                                       ggggTGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTCCGGCt  >  1:326357/1‑93 (MQ=255)

ATAAGCTCGACTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGACGCGTGTTCACGTCAGGGATGAAATCATCTGGCAATAGCGACGGCATCCGCAGCTCGACTTCTGTTTGCTGGCTGGTGAGATCTTCCAGCGACGGCTCGCGTCCGGCT  >  NC_000913/1170048‑1170227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`