BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,208,641	T→C	I81V (ATT→GTT)	b1157 ←	putative tail fiber protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,208,641	0	T	C	100.0%	724.5 / NA	221	I81V (ATT→GTT)	b1157	putative tail fiber protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (138/83); total (138/83)

Only 100 of 233 total aligned reads displayed.

CAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATT  >  NC_000913/1208551‑1208730

cAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAAccc                                                                                         >  2:4388367/1‑93 (MQ=255)

 aGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAAcccc                                                                                        <  1:5179707/93‑1 (MQ=255)

  gTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACcccc                                                                                       >  2:4647967/1‑93 (MQ=255)

  gTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTGGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAAcccct                                                                                       <  2:6320047/93‑2 (MQ=255)

   tCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAAcccccc                                                                                      <  1:5411632/93‑1 (MQ=255)

    cacaATCGTGGATCTTGACGGTAATCCATGAGCATGATGCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCcccg                                                                                     >  1:5537990/1‑93 (MQ=255)

      caATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCcccgcc                                                                                   >  2:1429443/1‑93 (MQ=255)

      caATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCcccgcc                                                                                   >  2:4309974/1‑93 (MQ=255)

       aaTCGTGGATCTTGACGGTAATCCATGAGCAGGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCcccgccc                                                                                  <  1:6221433/93‑1 (MQ=255)

        aTCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCcccgcccg                                                                                 >  1:4469645/1‑93 (MQ=255)

         tCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGt                                                                                >  1:3722622/1‑93 (MQ=255)

             ggATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATc                                                                            <  2:357666/93‑1 (MQ=255)

             ggATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATc                                                                            <  2:1812506/93‑1 (MQ=255)

               aTCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATGCCCCTGAATACTTAAAATAGAGCGTCCTGTATCAACCCCCCGCCCGTCATccc                                                                          <  1:6628191/93‑1 (MQ=255)

                tCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCa                                                                         >  2:458839/1‑93 (MQ=255)

                 cTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAg                                                                        >  2:2376239/1‑93 (MQ=255)

                 cTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAg                                                                        >  2:4342187/1‑93 (MQ=255)

                   tGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGcc                                                                      >  2:6669242/1‑93 (MQ=255)

                    gACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCa                                                                     >  2:728691/1‑93 (MQ=255)

                     aCGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCAc                                                                    >  2:5545673/1‑93 (MQ=255)

                        gTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGaa                                                                 >  2:6046773/1‑93 (MQ=255)

                          aaTCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATa                                                               <  2:1565708/93‑1 (MQ=255)

                           aTCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATaa                                                              >  2:3655295/1‑93 (MQ=255)

                           aTCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATaa                                                              >  2:773391/1‑93 (MQ=255)

                            tCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATaaa                                                             <  2:1691497/93‑1 (MQ=255)

                            tCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATaaa                                                             >  2:1607135/1‑93 (MQ=255)

                                tGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTca                                                         >  2:1549739/1‑93 (MQ=255)

                                tGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTca                                                         >  2:6348878/1‑93 (MQ=255)

                                tGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTca                                                         >  2:5414125/1‑93 (MQ=255)

                                tGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTca                                                         <  1:5480128/93‑1 (MQ=255)

                                    cATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTcaccac                                                     >  1:5961324/1‑93 (MQ=255)

                                      tGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGt                                                   >  2:557954/1‑93 (MQ=255)

                                       gATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTa                                                  >  1:608137/1‑93 (MQ=255)

                                       gATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTa                                                  <  2:3831021/93‑1 (MQ=255)

                                        aTCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaa                                                 >  1:3130549/1‑93 (MQ=255)

                                        aTCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaa                                                 >  1:1286549/1‑93 (MQ=255)

                                         tcctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaaa                                                >  1:59242/1‑93 (MQ=255)

                                         tcctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaaa                                                <  2:5035523/93‑1 (MQ=255)

                                         tcctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaaa                                                <  1:2284704/93‑1 (MQ=255)

                                         tcctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTaaa                                                >  2:1951301/1‑93 (MQ=255)

                                          cctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAAt                                               <  2:6471084/93‑1 (MQ=255)

                                           ctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATc                                              >  1:4037395/1‑93 (MQ=255)

                                           ctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATc                                              <  1:3839855/93‑1 (MQ=255)

                                           ctccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATc                                              >  2:551447/1‑93 (MQ=255)

                                            tctgTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCa                                             <  1:3601954/90‑1 (MQ=255)

                                            tccGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCa                                             <  2:3760473/93‑1 (MQ=255)

                                               gTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGc                                          >  2:4637209/1‑93 (MQ=255)

                                                  gCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAat                                       <  2:3440238/93‑1 (MQ=255)

                                                   cATCCCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatt                                      <  1:2917507/93‑1 (MQ=255)

                                                   cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatt                                      <  2:6554742/93‑1 (MQ=255)

                                                   cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAGATCAGGCAatt                                      <  1:4219704/93‑1 (MQ=255)

                                                   cATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatt                                      >  1:789347/1‑93 (MQ=255)

                                                    aTACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAattt                                     <  2:6143554/93‑1 (MQ=255)

                                                     tACCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAattta                                    >  1:1081918/1‑93 (MQ=255)

                                                      aCCCCTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttat                                   <  2:4190940/93‑1 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTGACCACGTAAATCAGGCAatcttttt                                 >  1:2370188/1‑93 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttattt                                 >  2:2245231/1‑93 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttattt                                 >  1:5160947/1‑93 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttattt                                 <  1:538015/93‑1 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttattt                                 <  2:3001459/93‑1 (MQ=255)

                                                        cccTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAatttattt                                 >  1:5597960/1‑93 (MQ=255)

                                                         ccTGAATCCTTAAAATAGAGCGCCCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTg                                <  2:3996800/93‑1 (MQ=255)

                                                          cTGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGt                               >  2:1318593/1‑93 (MQ=255)

                                                           tGAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTc                              <  2:3255550/93‑1 (MQ=255)

                                                            gAATACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCg                             >  2:4744353/1‑93 (MQ=255)

                                                             aaTACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCgg                            <  1:2700144/93‑1 (MQ=255)

                                                             aaTACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCgg                            >  2:5362786/1‑93 (MQ=255)

                                                             aaTACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCgg                            <  2:5332985/93‑1 (MQ=255)

                                                              aTACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGa                           >  1:2509182/1‑93 (MQ=255)

                                                               tACTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGAt                          >  2:5931528/1‑93 (MQ=255)

                                                                aCTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATa                         >  1:2299772/1‑93 (MQ=255)

                                                                 cTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATaa                        >  1:70346/1‑93 (MQ=255)

                                                                 cTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATaa                        >  1:6439584/1‑93 (MQ=255)

                                                                 cTTAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATaa                        <  2:5124938/93‑1 (MQ=255)

                                                                  ttAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCGCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATaac                       >  2:3535449/1‑92 (MQ=255)

                                                                  ttAAAATAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAg                       <  1:3166823/93‑1 (MQ=255)

                                                                    aaaaTAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGcc                     >  1:2464973/1‑93 (MQ=255)

                                                                    aaaaTAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGcc                     <  2:887939/93‑1 (MQ=255)

                                                                     aaaTAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCt                    >  1:4714732/1‑93 (MQ=255)

                                                                      aaTAGAGCGACCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCtt                   <  1:4851539/93‑1 (MQ=255)

                                                                      aaTAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCtt                   <  1:928254/93‑1 (MQ=255)

                                                                      aaTAGAGCGACCCGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCtt                   <  2:2045407/93‑1 (MQ=255)

                                                                       aTAGAGCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCttt                  <  1:2238574/93‑1 (MQ=255)

                                                                        tAGAGCGCCCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTg                 <  1:4069008/93‑1 (MQ=255)

                                                                          gagCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGcc               >  1:1668637/1‑93 (MQ=255)

                                                                          gagCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGcc               >  1:460972/1‑93 (MQ=255)

                                                                           agCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCa              >  1:6503297/1‑93 (MQ=255)

                                                                            gCGACCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAg             >  2:5750162/1‑93 (MQ=255)

                                                                             ccaCCTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGt            <  2:197098/91‑1 (MQ=255)

                                                                             cGACCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGt            <  1:1030741/93‑1 (MQ=255)

                                                                              gACCTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGtt           <  1:5750139/93‑1 (MQ=255)

                                                                                ccTGTATCACCCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTcc         <  1:2094790/93‑1 (MQ=255)

                                                                                 cTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCg        >  1:2833068/1‑93 (MQ=255)

                                                                                 cTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCg        >  2:2917159/1‑93 (MQ=255)

                                                                                 cTGTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCg        >  2:2498379/1‑93 (MQ=255)

                                                                                   gTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCggg      >  2:3344708/1‑93 (MQ=255)

                                                                                     aTCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTa    <  1:343500/93‑1 (MQ=255)

                                                                                     aTCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTa    >  1:1481794/1‑93 (MQ=255)

                                                                                      tCAACCCCCCGCCCGTCCTCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGATCCGGGTAt   >  1:965522/1‑93 (MQ=255)

                                                                                      tCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTAt   >  1:1886616/1‑93 (MQ=255)

CAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATT  >  NC_000913/1208551‑1208730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`