BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	115,788	A→G	C438R (TGC→CGC)	hofB ←	HofB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	115,788	0	A	G	100.0%	735.0 / NA	228	C438R (TGC→CGC)	hofB	HofB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (140/88); total (140/88)

Only 100 of 274 total aligned reads displayed.

CCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAA  >  NC_000913/115698‑115877

   gcgcCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGt                                                                                      <  2:224560/93‑1 (MQ=255)

   gcgcCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGt                                                                                      >  2:5469559/1‑93 (MQ=255)

      ccAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGtttt                                                                                   >  1:6357236/1‑93 (MQ=255)

      ccAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGtttt                                                                                   <  1:5537167/93‑1 (MQ=255)

       cAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTc                                                                                  >  2:2708384/1‑93 (MQ=255)

          agTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaa                                                                               >  1:569975/1‑93 (MQ=255)

          agTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaa                                                                               >  1:2366856/1‑93 (MQ=255)

           gTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaaa                                                                              >  2:4943353/1‑93 (MQ=255)

            ttGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGTCGTTTTCaaaaa                                                                             >  1:6726078/1‑93 (MQ=255)

            ttGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaaaa                                                                             >  1:1257884/1‑93 (MQ=255)

            ttGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCaaaaa                                                                             <  2:5358417/93‑1 (MQ=255)

                ttACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGt                                                                         >  1:4177638/1‑93 (MQ=255)

                 tACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTa                                                                        <  1:3135341/93‑1 (MQ=255)

                 tACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTa                                                                        <  1:1677830/93‑1 (MQ=255)

                   cTCGCCATGCCGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCgaaag                                                                      >  1:6083045/1‑89 (MQ=255)

                     cGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCa                                                                    <  1:2125404/93‑1 (MQ=255)

                      gCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCAt                                                                   <  1:2827494/93‑1 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATa                                                                  <  2:4435381/93‑1 (MQ=255)

                       ccATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATa                                                                  <  2:2162078/93‑1 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCTTTTTCAAAAAGCGTACGCATAc                                                                 <  1:2883188/93‑1 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATAc                                                                 >  1:5296643/1‑93 (MQ=255)

                        cATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATAc                                                                 >  2:4628599/1‑93 (MQ=255)

                          tGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATAccc                                                               >  2:4716199/1‑93 (MQ=255)

                           gCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCg                                                              >  2:6154694/1‑93 (MQ=255)

                            cGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGc                                                             <  1:1647372/93‑1 (MQ=255)

                             ggCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGcc                                                            <  2:2384912/93‑1 (MQ=255)

                             ggCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGcc                                                            <  1:5254192/93‑1 (MQ=255)

                              gCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCt                                                           >  2:5655511/1‑93 (MQ=255)

                              gCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCt                                                           >  2:1909786/1‑93 (MQ=255)

                                aTCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGt                                                         >  2:116343/1‑93 (MQ=255)

                                 tCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTc                                                        >  1:5112197/1‑93 (MQ=255)

                                 tCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTc                                                        >  1:4730647/1‑93 (MQ=255)

                                 tCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTc                                                        >  2:722555/1‑93 (MQ=255)

                                  ccccAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcg                                                       <  2:5435935/93‑1 (MQ=255)

                                    ccAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcgag                                                     >  1:2497152/1‑91 (MQ=255)

                                      aGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcg                                                   >  2:4914647/1‑93 (MQ=255)

                                       gTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcgt                                                  >  2:3933646/1‑93 (MQ=255)

                                       gTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcgt                                                  <  2:29229/93‑1 (MQ=255)

                                        tACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTcgtgcgtg                                                 <  1:2555190/93‑1 (MQ=255)

                                           gcgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTgcgtgcgt                                              <  1:769247/93‑1 (MQ=255)

                                            cgGATTAACTCTTCAAAGGTGGTTAGGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGtt                                             <  2:4248848/93‑1 (MQ=255)

                                            cgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGtt                                             <  2:6471713/93‑1 (MQ=255)

                                            cgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGtt                                             >  2:4060707/1‑93 (MQ=255)

                                             ggATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGttt                                            >  2:3066344/1‑93 (MQ=255)

                                              gATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTc                                           >  1:1888775/1‑93 (MQ=255)

                                              gATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTc                                           >  1:2208393/1‑93 (MQ=255)

                                              gATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGCCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTc                                           <  2:2731225/93‑1 (MQ=255)

                                               aTTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTcc                                          <  1:3353932/93‑1 (MQ=255)

                                                ttAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCa                                         >  2:5005207/1‑93 (MQ=255)

                                                ttAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCa                                         >  1:4039343/1‑93 (MQ=255)

                                                ttAACTCTTCAAAGGGGGTTAAGCCTTGCTCTACGGTCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCa                                         >  1:5366423/1‑93 (MQ=255)

                                                 tAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGCTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAg                                        >  1:6388778/1‑93 (MQ=255)

                                                  aaCTCTGCAAAGGTGGTTAAGCCGTGCTCTACGGCCAGGCGGCCGGGCTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGc                                       >  2:6726289/1‑93 (MQ=255)

                                                   aCTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCg                                      >  2:3977985/1‑93 (MQ=255)

                                                   aCTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCg                                      >  1:4607584/1‑93 (MQ=255)

                                                   aCTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCg                                      >  2:5251279/1‑93 (MQ=255)

                                                    ctctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGa                                     <  2:3742312/93‑1 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    <  1:4419236/93‑1 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    >  1:1388602/1‑93 (MQ=255)

                                                     tctTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGAt                                    <  2:4152829/93‑1 (MQ=255)

                                                        tCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCa                                 <  1:4384881/93‑1 (MQ=255)

                                                          aaaGGTGTTTAATCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAAc                               <  1:4784777/93‑1 (MQ=255)

                                                          aaaGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAAc                               <  1:804801/93‑1 (MQ=255)

                                                            aGGTGTTTAACCCTTCCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGt                             <  1:3432043/93‑1 (MQ=255)

                                                            aGGTGGTTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGt                             <  2:3215897/93‑1 (MQ=255)

                                                             ggtggtTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTc                            >  1:907342/1‑93 (MQ=255)

                                                              gtggtTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCg                           >  2:819315/1‑93 (MQ=255)

                                                               gggtAAAGCCTTGCTCTACGGCCAGGCGGCCTTTTTCAAAAAGCGTCCGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCgg                          <  2:4585264/92‑1 (MQ=255)

                                                                 gtTAAGCGTTGCTCTACGGCCAGGCGGCCTTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTa                        <  2:5800672/93‑1 (MQ=255)

                                                                 gtTAAGCCTTGCTCTACGGCCAGGCGGCCTTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTa                        <  2:6373253/93‑1 (MQ=255)

                                                                 gtTAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTa                        <  1:6276161/93‑1 (MQ=255)

                                                                  ttAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAt                       <  1:2103847/93‑1 (MQ=255)

                                                                  ttAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAt                       >  2:129444/1‑93 (MQ=255)

                                                                   tAAGCTTTGCTCTACGCCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAtt                      <  1:3874615/93‑1 (MQ=255)

                                                                   tAAGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTAtt                      <  2:3692447/93‑1 (MQ=255)

                                                                    aaGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTa                     <  1:5931835/93‑1 (MQ=255)

                                                                     aGCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAg                    >  2:642527/1‑93 (MQ=255)

                                                                      gCCTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGc                   >  1:5684093/1‑93 (MQ=255)

                                                                       ccTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCg                  <  2:2643645/93‑1 (MQ=255)

                                                                        cTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCgg                 >  2:6699294/1‑93 (MQ=255)

                                                                        cTTGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCgg                 <  1:5003615/93‑1 (MQ=255)

                                                                         ttGCTCTACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGa                >  2:1744466/1‑93 (MQ=255)

                                                                            ctctACGGCCAGGGGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAAt             <  1:3222038/93‑1 (MQ=255)

                                                                            ctctACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAAt             <  2:6618483/93‑1 (MQ=255)

                                                                              ctACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATaa           <  2:2866790/93‑1 (MQ=255)

                                                                               tACGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAg          >  2:4806087/1‑93 (MQ=255)

                                                                                 gggCCAGGCGCCTGTTTTAAAAAAGCGTACCCCTACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCt        <  1:647778/92‑1 (MQ=255)

                                                                                 cGGCCGGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCt        <  1:2070996/93‑1 (MQ=255)

                                                                                 cGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCt        <  2:1724711/93‑1 (MQ=255)

                                                                                 cGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCt        <  2:5591416/93‑1 (MQ=255)

                                                                                 cGGCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCt        >  2:1229083/1‑93 (MQ=255)

                                                                                  ggCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTg       <  1:985425/93‑1 (MQ=255)

                                                                                   gCCAGGCGTCCGTTTTCAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGa      <  2:3374127/93‑1 (MQ=255)

                                                                                   gCCAGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGa      >  2:1473304/1‑93 (MQ=255)

                                                                                   gCCAGGCGGCCGTTTTAAAAAAGCGTACGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGa      <  1:102843/93‑1 (MQ=255)

                                                                                      gggcggcGGTTTTAAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGa   <  1:695226/92‑1 (MQ=255)

                                                                                      aGGCGGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGa   >  2:5918985/1‑93 (MQ=255)

                                                                                       ggcggcTGTTTTAAAAAAGCTTCCGCATCCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  <  1:837013/93‑1 (MQ=255)

                                                                                       ggcggcCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  <  2:202885/93‑1 (MQ=255)

                                                                                       ggcggcCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGaa  <  1:4251679/93‑1 (MQ=255)

CCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAACGTCGGTATTAGCGGAAATAAGCTGACGAA  >  NC_000913/115698‑115877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`