BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,298,928	A→G	intergenic (+460/‑278)	ychE → / → oppA	putative channel protein/OppA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,298,928	0	A	G	100.0%	743.2 / NA	225	intergenic (+460/‑278)	ychE/oppA	putative channel protein/OppA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/114); total (111/114)

Only 100 of 226 total aligned reads displayed.

GATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGTCTCGACA  >  NC_000913/1298838‑1299017

gATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCt                                                                                         >  2:2243224/1‑93 (MQ=255)

gATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCt                                                                                         <  1:6697509/93‑1 (MQ=255)

gATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCt                                                                                         >  2:3817939/1‑93 (MQ=255)

gATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCt                                                                                         <  2:50568/93‑1 (MQ=255)

 aTGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCtt                                                                                        <  2:6365644/93‑1 (MQ=255)

   gCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTc                                                                                      <  2:4586755/93‑1 (MQ=255)

     aaGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCg                                                                                    >  1:5938915/1‑93 (MQ=255)

      aGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCgg                                                                                   >  1:3980914/1‑93 (MQ=255)

           taGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAAc                                                                              <  2:5180150/93‑1 (MQ=255)

            aGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAAcc                                                                             >  1:5847753/1‑93 (MQ=255)

             gATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCg                                                                            >  2:2484481/1‑93 (MQ=255)

                 cTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAg                                                                        >  2:4467998/1‑93 (MQ=255)

                 cTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAg                                                                        <  1:3883253/93‑1 (MQ=255)

                   gATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGAc                                                                      <  1:1044173/93‑1 (MQ=255)

                    aTACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCAATTGGTGCTTTCCGGGCAACCGCCAGACg                                                                     >  1:1547667/1‑93 (MQ=255)

                     tACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGa                                                                    <  2:5022070/93‑1 (MQ=255)

                        ggTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTc                                                                 >  1:4934085/1‑93 (MQ=255)

                         gTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCt                                                                <  1:3066652/93‑1 (MQ=255)

                         gTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCt                                                                <  2:1045635/93‑1 (MQ=255)

                          tCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCtt                                                               >  1:5299796/1‑93 (MQ=255)

                           cAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCttt                                                              <  1:676693/93‑1 (MQ=255)

                            aaTAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTa                                                             <  1:3554311/93‑1 (MQ=255)

                            aaTAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTa                                                             <  2:2968279/93‑1 (MQ=255)

                            aaTAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTa                                                             <  2:6517549/93‑1 (MQ=255)

                             aTAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTAt                                                            >  2:1849578/1‑93 (MQ=255)

                              tAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTAtt                                                           <  2:2271359/93‑1 (MQ=255)

                                aaaGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTgg                                                         <  1:416535/93‑1 (MQ=255)

                                aaaGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTgg                                                         >  2:6681949/1‑93 (MQ=255)

                                 aaGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGt                                                        <  1:345362/93‑1 (MQ=255)

                                 aaGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGt                                                        <  2:6542005/93‑1 (MQ=255)

                                 aaGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGt                                                        >  1:3721172/1‑93 (MQ=255)

                                  agagAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTa                                                       <  2:1689272/93‑1 (MQ=255)

                                  agagAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTa                                                       <  2:2175416/93‑1 (MQ=255)

                                   gagaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGCGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTaa                                                      <  2:4774122/93‑1 (MQ=255)

                                    agaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAAt                                                     <  1:2901006/93‑1 (MQ=255)

                                    agaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAAt                                                     >  2:4013930/1‑93 (MQ=255)

                                     gaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATg                                                    >  2:4204454/1‑93 (MQ=255)

                                     gaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATg                                                    >  2:3936348/1‑93 (MQ=255)

                                     gaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATg                                                    >  2:352040/1‑93 (MQ=255)

                                     gaATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATg                                                    <  1:6154714/93‑1 (MQ=255)

                                      aaTTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATga                                                   <  2:2802914/93‑1 (MQ=255)

                                      aaTTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATga                                                   <  1:1902559/93‑1 (MQ=255)

                                      aaTTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATga                                                   <  1:5526477/93‑1 (MQ=255)

                                         tGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaa                                                <  2:2731274/93‑1 (MQ=255)

                                         tGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaa                                                <  2:1910630/93‑1 (MQ=255)

                                          gCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaat                                               <  1:3697629/93‑1 (MQ=255)

                                          gCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaat                                               >  2:1583228/1‑93 (MQ=255)

                                          gCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaat                                               <  1:242106/93‑1 (MQ=255)

                                           cTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaata                                              >  2:5722379/1‑93 (MQ=255)

                                           cTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaata                                              <  1:2679440/93‑1 (MQ=255)

                                            ttAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaataa                                             <  1:1302883/93‑1 (MQ=255)

                                            ttAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaataa                                             >  2:5540033/1‑93 (MQ=255)

                                            ttAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaataa                                             <  2:4360840/93‑1 (MQ=255)

                                             tAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAAGCGCCAGACGATTCTTTATTGGTAATGAGaataat                                            >  1:6116679/1‑93 (MQ=255)

                                             tAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGaataat                                            >  2:234789/1‑93 (MQ=255)

                                             tAACAATTTTGCAAAATGGATTGGCGAGTAAGAACCGCATTTGGTGCATTCCGGGCAACCGGCAGACGATTCTTTATTGGCAATGAGaataat                                            >  1:4423537/1‑93 (MQ=255)

                                               aCAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTa                                          <  1:4656508/93‑1 (MQ=255)

                                               aCAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTa                                          <  1:5089024/93‑1 (MQ=255)

                                                 aaTTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAAc                                        >  1:6529917/1‑93 (MQ=255)

                                                 aaTTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAAc                                        >  2:5801046/1‑93 (MQ=255)

                                                  aTTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACa                                       >  2:713906/1‑93 (MQ=255)

                                                   ttttGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACaa                                      <  2:3420482/93‑1 (MQ=255)

                                                       gCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTaa                                  >  1:2053661/1‑93 (MQ=255)

                                                        cAAAATGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTaaa                                 <  2:2860065/93‑1 (MQ=255)

                                                         aaaaTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAag                                <  1:2236006/93‑1 (MQ=255)

                                                           aaTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAagag                              >  2:1211640/1‑93 (MQ=255)

                                                           aaTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAagag                              >  2:5596090/1‑93 (MQ=255)

                                                           aaTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAagag                              <  1:6006358/93‑1 (MQ=255)

                                                           aaTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAagag                              <  1:631262/93‑1 (MQ=255)

                                                            aTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGc                             <  1:539821/93‑1 (MQ=255)

                                                            aTGTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGc                             <  1:751113/93‑1 (MQ=255)

                                                              gTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGt                           >  1:4279728/1‑93 (MQ=255)

                                                              gTATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGt                           <  2:5462994/93‑1 (MQ=255)

                                                               tATTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTc                          >  2:694093/1‑93 (MQ=255)

                                                                aTTGGCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTcg                         >  1:4308351/1‑93 (MQ=255)

                                                                   ggCGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGa                      >  1:3206764/1‑93 (MQ=255)

                                                                     cGAGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGaaa                    <  2:4093369/93‑1 (MQ=255)

                                                                       aGTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGa                  >  2:4523376/1‑93 (MQ=255)

                                                                        gTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaa                 <  1:1373202/93‑1 (MQ=255)

                                                                        gTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaa                 <  2:5848001/93‑1 (MQ=255)

                                                                        gTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaa                 <  1:2592470/93‑1 (MQ=255)

                                                                        gTAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaa                 >  2:5402032/1‑93 (MQ=255)

                                                                         tAAGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaat                <  2:6124600/93‑1 (MQ=255)

                                                                          aaGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaata               >  2:3153703/1‑93 (MQ=255)

                                                                           aGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaataa              >  1:184927/1‑93 (MQ=255)

                                                                           aGAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaataa              >  1:4113890/1‑93 (MQ=255)

                                                                            gAACCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGaataat             <  1:2796028/93‑1 (MQ=255)

                                                                             aaCCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAAtg            <  1:6336245/93‑1 (MQ=255)

                                                                              aCCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAAtgt           <  2:6060638/93‑1 (MQ=255)

                                                                              aCCGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAAtgt           >  1:5119494/1‑93 (MQ=255)

                                                                               ccGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAAtgtg          >  1:2666721/1‑93 (MQ=255)

                                                                                cGCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATgtgt         >  2:1241888/1‑93 (MQ=255)

                                                                                 gCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtc        <  2:303831/93‑1 (MQ=255)

                                                                                 gCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtc        <  1:4847309/93‑1 (MQ=255)

                                                                                 gCATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtc        >  2:3652255/1‑93 (MQ=255)

                                                                                  cATTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtct       <  2:6458992/93‑1 (MQ=255)

                                                                                  cATTTGGTGCTTTCCGGGCAACCGCCAGAAGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtct       >  2:4397043/1‑93 (MQ=255)

                                                                                   aTTTGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGtctc      >  1:3948557/1‑93 (MQ=255)

                                                                                    tttGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGTCTCg     <  2:3484237/93‑1 (MQ=255)

                                                                                    tttGGTGCTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGTCTCg     <  2:3093786/93‑1 (MQ=255)

GATGCAAGCTATAGATTCTGATACGGTCAATAAAAGAGAATTGCTTAACAATTTTGCAAAATGTATTGGCGAGTAAGAACCGCATTTGGTACTTTCCGGGCAACCGCCAGACGATTCTTTATTGGTAATGAGAATAATTAACAATTAAAGAGCGTCGCGAAAGAATAATGTGTCTCGACA  >  NC_000913/1298838‑1299017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`