BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,338,553	A→G	H96R (CAC→CGC)	yciS →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,338,553	0	A	G	100.0%	700.8 / NA	218	H96R (CAC→CGC)	yciS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/121); total (97/121)

Only 100 of 230 total aligned reads displayed.

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCt                                                                                         >  1:4003313/1‑93 (MQ=255)

  gTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCg                                                                                       >  1:2044737/1‑93 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      <  1:6196671/93‑1 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      <  2:4512701/93‑1 (MQ=255)

    tCGTGTTGCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTc                                                                                     <  1:831797/93‑1 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAAGCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  >  2:6546003/1‑93 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  >  2:1541677/1‑93 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  <  2:229465/93‑1 (MQ=255)

         tttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcgg                                                                                <  1:2873214/93‑1 (MQ=255)

          ttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcggc                                                                               >  1:4408005/1‑93 (MQ=255)

          ttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcggc                                                                               >  2:2649908/1‑93 (MQ=255)

             ccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcggcgca                                                                            >  1:1849515/1‑91 (MQ=255)

             ccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGaa                                                                            >  1:5662101/1‑93 (MQ=255)

              cTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAg                                                                           <  1:753317/93‑1 (MQ=255)

                ggCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGa                                                                         <  1:4563903/93‑1 (MQ=255)

                  cgcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAAt                                                                       <  2:5245392/93‑1 (MQ=255)

                  cgcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAAt                                                                       <  2:3539233/93‑1 (MQ=255)

                  cgcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAAt                                                                       <  2:1910112/93‑1 (MQ=255)

                       gcTGAACTTAAAATAAAGCGACTGGAAAACTAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  <  2:2777428/93‑1 (MQ=255)

                       gcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  <  2:4227508/93‑1 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               <  1:3962315/93‑1 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               <  2:5385063/93‑1 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               <  1:140503/93‑1 (MQ=255)

                           gaCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  2:6573105/92‑1 (MQ=255)

                           aaCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTa                                                              <  1:5282293/93‑1 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             >  2:1009253/1‑93 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             >  2:6665977/1‑93 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTAGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             >  2:3828269/1‑93 (MQ=255)

                             cGTAAAATAAAGCGACTGGAAAACGAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATg                                                            <  1:6588915/93‑1 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           >  2:879526/1‑93 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           <  2:5986/93‑1 (MQ=255)

                               tAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCt                                                          >  1:2666517/1‑93 (MQ=255)

                                aaaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTg                                                         >  1:2272036/1‑93 (MQ=255)

                                 aaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                                                        >  2:2552580/1‑93 (MQ=255)

                                 aaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                                                        <  1:318788/93‑1 (MQ=255)

                                  aaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                                                       <  2:1819753/93‑1 (MQ=255)

                                   aTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAg                                                      <  2:4184825/93‑1 (MQ=255)

                                   aTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAg                                                      >  2:5090465/1‑93 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     <  1:3423250/93‑1 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     <  1:3367535/93‑1 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACGGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     <  2:1144298/93‑1 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    >  1:1931039/1‑93 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    <  2:764030/93‑1 (MQ=255)

                                      aaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttg                                                   <  1:4732454/93‑1 (MQ=255)

                                       aGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGGGAAGGAATAACTTTCTATGCTGGAgtggt                                                  >  1:915847/1‑93 (MQ=255)

                                       aGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgt                                                  <  2:1517713/93‑1 (MQ=255)

                                        gCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt                                                 <  2:5419883/93‑1 (MQ=255)

                                        gCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgtt                                                 <  1:5770241/93‑1 (MQ=255)

                                        gCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGCAgttgtt                                                 <  1:6604639/93‑1 (MQ=255)

                                         cGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttg                                                >  2:6447687/1‑93 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               >  2:3605349/1‑93 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               <  2:2462813/93‑1 (MQ=255)

                                           aCTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgtt                                              >  1:2927672/1‑93 (MQ=255)

                                            cTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGttt                                             >  1:4925664/1‑93 (MQ=255)

                                            cTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGttt                                             >  2:6316064/1‑93 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  2:1698028/93‑1 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  1:4153896/93‑1 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  1:1648727/93‑1 (MQ=255)

                                             tGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGACGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTc                                            <  2:4444882/93‑1 (MQ=255)

                                                aaaaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGc                                         <  1:5156843/93‑1 (MQ=255)

                                                 aaaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCt                                        <  1:3118170/93‑1 (MQ=255)

                                                  aaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtt                                       >  2:2079890/1‑93 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      >  1:3868821/1‑93 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      >  2:4027549/1‑93 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      <  1:3673992/93‑1 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      <  2:3041329/93‑1 (MQ=255)

                                                      aGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGc                                   >  1:1026005/1‑93 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTg                                <  1:5302655/93‑1 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTg                                >  1:6029888/1‑93 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTg                                >  1:6659269/1‑93 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTg                                >  1:4220568/1‑93 (MQ=255)

                                                          ttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGt                               >  2:3504829/1‑93 (MQ=255)

                                                          ttCACCCGCGACTGACGTGGCTGTAATGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGt                               >  2:297096/1‑93 (MQ=255)

                                                           tctcccGCGACTGACGTGCTTGTAGTGCCGCGCGCGTCGGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTCTGTCTTCTTTTGCCTGTa                              <  1:3875927/90‑1 (MQ=255)

                                                            cACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAg                             >  2:4609275/1‑93 (MQ=255)

                                                             aCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGc                            >  2:1557350/1‑93 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          >  1:2405511/1‑93 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          >  1:4532519/1‑93 (MQ=255)

                                                                cgcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGc                         >  2:3367412/1‑93 (MQ=255)

                                                                cgcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGc                         >  1:5867882/1‑93 (MQ=255)

                                                                cgcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGc                         <  2:2097364/93‑1 (MQ=255)

                                                                cgcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTCCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGc                         <  2:6186657/93‑1 (MQ=255)

                                                                 gcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCt                        <  2:1263900/93‑1 (MQ=255)

                                                                   gACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGc                      >  2:5900399/1‑93 (MQ=255)

                                                                    aCTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGcc                     <  2:4796003/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   >  1:5422433/1‑93 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              <  1:5053410/93‑1 (MQ=255)

                                                                            ggCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTg             <  2:3751852/93‑1 (MQ=255)

                                                                            ggCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTg             <  2:4949344/93‑1 (MQ=255)

                                                                            ggCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTg             >  2:521904/1‑93 (MQ=255)

                                                                            ggCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTg             <  2:3159706/93‑1 (MQ=255)

                                                                              cTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGt           <  1:6344490/93‑1 (MQ=255)

                                                                               tGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGta          <  2:4710315/93‑1 (MQ=255)

                                                                                gTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtat         <  1:3505029/93‑1 (MQ=255)

                                                                                 tAGTGCCGCGCTCGTCAGCGGCGAAGGAATAGCTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtata        <  2:3779850/93‑1 (MQ=255)

                                                                                 tAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtata        <  1:1201705/93‑1 (MQ=255)

                                                                                 tAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtata        >  2:5696137/1‑93 (MQ=255)

                                                                                  aGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTatat       <  2:4374884/93‑1 (MQ=255)

                                                                                     gCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATggg    >  2:1377360/1‑93 (MQ=255)

                                                                                     gCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATggg    <  2:1223506/93‑1 (MQ=255)

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`