BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,340,692	C→T	S5F (TCC→TTC)	yciH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,340,692	0	C	T	100.0%	544.9 / NA	147	S5F (TCC→TTC)	yciH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (52/95); total (52/95)

Only 100 of 151 total aligned reads displayed.

ATTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTCCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGC  >  NC_000913/1340602‑1340781

aTTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCa                                                                                         <  1:5880748/93‑1 (MQ=255)

aTTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCa                                                                                         >  1:2786246/1‑93 (MQ=255)

 ttGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCaa                                                                                        <  2:3099545/93‑1 (MQ=255)

  tGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAAc                                                                                       <  2:2046639/93‑1 (MQ=255)

   ggTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACa                                                                                      >  1:1422201/1‑93 (MQ=255)

   ggTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACa                                                                                      <  1:724084/93‑1 (MQ=255)

   ggTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACa                                                                                      <  2:5030272/93‑1 (MQ=255)

   ggTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACa                                                                                      <  2:5442065/93‑1 (MQ=255)

    gTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAg                                                                                     <  1:1133393/93‑1 (MQ=255)

         ccGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTc                                                                                >  2:665909/1‑93 (MQ=255)

          cGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCt                                                                               >  1:844310/1‑93 (MQ=255)

          cGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCt                                                                               <  2:2878974/93‑1 (MQ=255)

           ggTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTg                                                                              <  1:6597959/93‑1 (MQ=255)

           ggTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTg                                                                              <  2:417015/93‑1 (MQ=255)

           ggTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTg                                                                              >  2:6546886/1‑93 (MQ=255)

              aaCGCAATCGGTATAGCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTc                                                                           <  1:4508836/93‑1 (MQ=255)

              aaCGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTc                                                                           <  2:4619658/93‑1 (MQ=255)

               aCGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCt                                                                          <  2:3756159/93‑1 (MQ=255)

               aCGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCt                                                                          <  2:3659609/93‑1 (MQ=255)

               aCGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCt                                                                          <  1:727093/93‑1 (MQ=255)

                cGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTa                                                                         <  2:6146029/93‑1 (MQ=255)

                  cAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACt                                                                       >  2:921937/1‑93 (MQ=255)

                  cAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACt                                                                       <  2:2363515/93‑1 (MQ=255)

                   agtCGGTCGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTc                                                                      <  2:5764262/91‑1 (MQ=255)

                   aaTCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTc                                                                      <  2:3554405/93‑1 (MQ=255)

                    aTCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCa                                                                     <  2:677552/93‑1 (MQ=255)

                     tCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCaa                                                                    <  2:3297354/93‑1 (MQ=255)

                        gTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACgg                                                                 <  1:4372096/93‑1 (MQ=255)

                          aGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGaa                                                               >  1:3186857/1‑93 (MQ=255)

                           gATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGCTTTCAACAGCCGTCTGGTCTACTCAACGGaaa                                                              >  2:6336465/1‑93 (MQ=255)

                           gATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGaaa                                                              <  1:1675514/93‑1 (MQ=255)

                            aTCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAAc                                                             >  2:2938251/1‑93 (MQ=255)

                            aTCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAAc                                                             <  2:2373923/93‑1 (MQ=255)

                            aTCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAAc                                                             <  2:3343522/93‑1 (MQ=255)

                              ccAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCg                                                           <  1:1716299/93‑1 (MQ=255)

                                  cgcAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACg                                                       <  1:402268/93‑1 (MQ=255)

                                   gcAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGt                                                      >  2:937558/1‑93 (MQ=255)

                                    cAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTa                                                     >  1:5969278/1‑93 (MQ=255)

                                    cAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTa                                                     <  2:5515673/93‑1 (MQ=255)

                                     aGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTAt                                                    >  2:5492800/1‑93 (MQ=255)

                                     aGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTAt                                                    <  2:179949/93‑1 (MQ=255)

                                      gACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTAtt                                                   <  1:6059652/93‑1 (MQ=255)

                                      gACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTAtt                                                   >  2:6011731/1‑93 (MQ=255)

                                      gACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTAtt                                                   <  2:2139303/93‑1 (MQ=255)

                                        cGCTGAAAGCGATCAACGTGTCTTAACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGGCTGGTCTACTCAACGGAAACCGGACGTATtga                                                 <  1:1023213/93‑1 (MQ=255)

                                         gCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATtgat                                                <  1:2122463/93‑1 (MQ=255)

                                           tGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATtgatga                                              <  1:3447567/93‑1 (MQ=255)

                                           tGAAAGCCATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACAGGACGTATtgatga                                              >  1:862753/1‑93 (MQ=255)

                                             aaaGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGc                                            >  1:2494004/1‑93 (MQ=255)

                                             aaaGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGc                                            >  2:6469698/1‑93 (MQ=255)

                                              aaGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGcc                                           <  2:4548262/93‑1 (MQ=255)

                                              aaGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGcc                                           <  1:474782/93‑1 (MQ=255)

                                               aGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGccc                                          <  2:25242/93‑1 (MQ=255)

                                               aGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGccc                                          >  2:6103176/1‑93 (MQ=255)

                                                gCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCa                                         >  1:4614099/1‑93 (MQ=255)

                                                gCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCa                                         <  2:3391239/93‑1 (MQ=255)

                                                  gATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCaaa                                       <  2:5219027/93‑1 (MQ=255)

                                                  gATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCaaa                                       >  2:2089952/1‑93 (MQ=255)

                                                  gATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCaaa                                       >  2:6149251/1‑93 (MQ=255)

                                                   aTCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAg                                      <  2:466079/93‑1 (MQ=255)

                                                   aTCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAg                                      >  1:3627251/1‑93 (MQ=255)

                                                    tCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGc                                     >  1:4872992/1‑93 (MQ=255)

                                                    tCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGc                                     <  2:1631533/93‑1 (MQ=255)

                                                    tCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGc                                     <  2:6258540/93‑1 (MQ=255)

                                                    tCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGc                                     <  2:531062/93‑1 (MQ=255)

                                                    tCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGc                                     >  1:2328776/1‑93 (MQ=255)

                                                      aaCGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCgc                                   >  2:6062616/1‑92 (MQ=255)

                                                       aCGCCTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGc                                  >  2:5234851/1‑93 (MQ=255)

                                                          ccTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGcccc                               <  1:3676528/93‑1 (MQ=255)

                                                          ccTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGcccc                               <  2:3898393/93‑1 (MQ=255)

                                                          ccTCTTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGcccc                               <  1:1580438/93‑1 (MQ=255)

                                                           ctctTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCt                              >  2:5429548/1‑93 (MQ=255)

                                                            tctTTACAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTg                             >  1:4159943/1‑93 (MQ=255)

                                                                 aCAGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGc                        <  1:4239629/93‑1 (MQ=255)

                                                                   aGCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGccc                      <  1:359297/93‑1 (MQ=255)

                                                                    gCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCt                     <  1:6266530/93‑1 (MQ=255)

                                                                    gCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCt                     <  1:5315530/93‑1 (MQ=255)

                                                                    gCGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCt                     >  2:1607175/1‑93 (MQ=255)

                                                                     cGGAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTa                    <  2:3955111/93‑1 (MQ=255)

                                                                       gAGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTaaa                  <  1:2794030/93‑1 (MQ=255)

                                                                        aGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTCAAg                 >  1:5907532/1‑93 (MQ=255)

                                                                        aGTGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAg                 <  2:5251159/93‑1 (MQ=255)

                                                                          tGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGc               <  2:2166732/93‑1 (MQ=255)

                                                                          tGCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGc               >  1:6500094/1‑93 (MQ=255)

                                                                           gCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCg              <  1:2241144/93‑1 (MQ=255)

                                                                           gCATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCg              >  1:5739110/1‑93 (MQ=255)

                                                                            cATGATGAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGa             <  1:6234534/93‑1 (MQ=255)

                                                                             atgatgAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGAc            <  1:5957026/93‑1 (MQ=255)

                                                                             atgatgAGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGAc            >  1:5959895/1‑93 (MQ=255)

                                                                               gatgaGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACgg          <  1:2035657/93‑1 (MQ=255)

                                                                                 tgaGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGgtg        <  1:352792/93‑1 (MQ=255)

                                                                                  taGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGgtgt       <  1:3222431/92‑1 (MQ=255)

                                                                                  gaGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGgtgt       <  1:5740778/93‑1 (MQ=255)

                                                                                   aGTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGtgtg      <  1:5586789/93‑1 (MQ=255)

                                                                                    gTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTgtgg     <  1:3811706/93‑1 (MQ=255)

                                                                                    gTGATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTgtgg     >  2:2936221/1‑93 (MQ=255)

                                                                                      taTTTCAACAGCCGTCTGTTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTgtggtg   <  1:1908281/92‑1 (MQ=255)

                                                                                      gATTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTgtggtg   >  2:3720580/1‑93 (MQ=255)

                                                                                       aTTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGc  <  2:4987894/93‑1 (MQ=255)

                                                                                       aTTTCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGc  >  2:922191/1‑93 (MQ=255)

ATTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGATGAGTGATTCCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGC  >  NC_000913/1340602‑1340781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`