BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,358,926	T→C	T3A (ACC→GCC)	b1297 ←	putative glutamine synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,358,926	0	T	C	100.0%	692.3 / NA	209	T3A (ACC→GCC)	b1297	putative glutamine synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/93); total (116/93)

Only 100 of 215 total aligned reads displayed.

GCTCCAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGTTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTAA  >  NC_000913/1358836‑1359015

 cTCCAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTc                                                                                        >  1:903968/1‑93 (MQ=255)

  tCCAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTcc                                                                                       >  2:1367028/1‑93 (MQ=255)

  tCCAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTcc                                                                                       >  2:1940921/1‑93 (MQ=255)

   cggggTAGCTTTTCCCTTCCGGCGGAACGG‑CCCTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCa                                                                                      <  2:4510598/90‑1 (MQ=255)

   ccAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCa                                                                                      >  2:6203998/1‑93 (MQ=255)

    cAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCAt                                                                                     >  2:3567490/1‑93 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCAtta                                                                                   >  1:4197577/1‑91 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGa                                                                                   >  2:1090572/1‑93 (MQ=255)

      ggTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGa                                                                                   >  2:2115662/1‑93 (MQ=255)

        tAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAtt                                                                                 >  2:1053715/1‑93 (MQ=255)

         aGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTTCATGAttc                                                                                >  1:2736834/1‑93 (MQ=255)

         aGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttc                                                                                >  2:4755294/1‑93 (MQ=255)

          gtttttCTCTTCCTGCGAAAGGC‑CCCCCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttct                                                                               <  2:1498351/90‑1 (MQ=255)

            gTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttcttc                                                                             >  2:4142729/1‑93 (MQ=255)

            gTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttcttc                                                                             >  1:3669635/1‑93 (MQ=255)

            gTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGAttcttc                                                                             >  1:1604544/1‑93 (MQ=255)

               tCACTCCCTGGAAAAGGG‑CCCTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGcc                                                                          <  1:5150526/93‑1 (MQ=255)

                 aCTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCtt                                                                        >  2:3662756/1‑93 (MQ=255)

                 aCTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCtt                                                                        >  1:389481/1‑93 (MQ=255)

                 aCTTCCTGAGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCtt                                                                        >  2:1581706/1‑93 (MQ=255)

                          ggaaaGGCCGCTCCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGgtttgt                                                                <  1:6290369/91‑1 (MQ=255)

                               gg‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCg                                                          >  1:2186394/1‑93 (MQ=255)

                                gccgcTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCg                                                          <  2:6279581/91‑1 (MQ=255)

                                g‑cgcTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGc                                                         >  1:1781427/1‑93 (MQ=255)

                                   ccgcccccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTc                                                       <  2:474847/89‑1 (MQ=255)

                                     tACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGt                                                     >  1:1118472/1‑93 (MQ=255)

                                      cccccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGtt                                                    <  2:662202/92‑1 (MQ=255)

                                      aCCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGtt                                                    >  2:6578030/1‑93 (MQ=255)

                                       caccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTa                                                   <  1:3015102/91‑1 (MQ=255)

                                         ccGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATc                                                 <  2:5138343/93‑1 (MQ=255)

                                           gCCTCTCTTCTGACTGCTGCACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               >  1:6528886/1‑93 (MQ=255)

                                           gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               <  2:4874207/93‑1 (MQ=255)

                                           gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               >  1:5674582/1‑93 (MQ=255)

                                           gCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaa                                               >  2:4423711/1‑93 (MQ=255)

                                            ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              >  1:1014583/1‑93 (MQ=255)

                                            ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              <  1:6447077/93‑1 (MQ=255)

                                            ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              <  1:2372898/93‑1 (MQ=255)

                                            ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              <  1:2631839/93‑1 (MQ=255)

                                            ccTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCaaa                                              <  1:3351613/93‑1 (MQ=255)

                                             ctctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAg                                             <  2:3512736/93‑1 (MQ=255)

                                             ctctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAg                                             <  2:5254502/93‑1 (MQ=255)

                                             ctctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAg                                             >  1:1861889/1‑93 (MQ=255)

                                              tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            <  1:956898/93‑1 (MQ=255)

                                              tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            <  1:5615338/93‑1 (MQ=255)

                                              tctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGc                                            >  2:5959127/1‑93 (MQ=255)

                                               ctctTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCg                                           <  1:6702662/93‑1 (MQ=255)

                                                tcttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGt                                          >  2:4100622/1‑93 (MQ=255)

                                                tcttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGt                                          >  2:3262929/1‑93 (MQ=255)

                                                 cttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTa                                         >  1:5254394/1‑93 (MQ=255)

                                                  ttctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaa                                        >  2:5716976/1‑93 (MQ=255)

                                                    ctGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTaaaa                                      <  1:5558415/93‑1 (MQ=255)

                                                     tGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAat                                     >  2:4240773/1‑93 (MQ=255)

                                                       aCTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAatat                                   <  2:400166/93‑1 (MQ=255)

                                                       aCTGCTGAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAatat                                   >  1:5820811/1‑93 (MQ=255)

                                                        ctgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAAtata                                  <  2:3878958/93‑1 (MQ=255)

                                                        ctgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAAtata                                  <  1:3293055/93‑1 (MQ=255)

                                                         tgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATaa                                 <  2:884838/93‑1 (MQ=255)

                                                         tgctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATaa                                 >  2:6671557/1‑93 (MQ=255)

                                                          gctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAAt                                <  1:3164826/93‑1 (MQ=255)

                                                          gctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAAt                                >  2:3728882/1‑93 (MQ=255)

                                                           ctgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATg                               <  2:754426/93‑1 (MQ=255)

                                                            tgAACAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGa                              <  1:2474085/93‑1 (MQ=255)

                                                              aaCAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGacc                            <  2:175141/93‑1 (MQ=255)

                                                              aaCAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGacc                            <  2:4990313/93‑1 (MQ=255)

                                                               aCAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGacca                           >  1:765269/1‑93 (MQ=255)

                                                                cAAAGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGaccac                          <  2:5066835/93‑1 (MQ=255)

                                                                 aaaGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGaccacc                         <  2:5442104/93‑1 (MQ=255)

                                                                  aaGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGAccacca                        <  1:4811120/93‑1 (MQ=255)

                                                                  aaGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGGTTTCCGCTCGTTATCAAAGCGTAAAATATAAAGAtcacca                        >  2:6076252/1‑93 (MQ=255)

                                                                   aGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAt                       <  2:2611276/93‑1 (MQ=255)

                                                                   aGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAt                       <  2:5144494/93‑1 (MQ=255)

                                                                   aGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAt                       <  1:5322739/93‑1 (MQ=255)

                                                                   aGTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAt                       <  1:57368/93‑1 (MQ=255)

                                                                    gTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAtt                      >  2:4920186/1‑93 (MQ=255)

                                                                    gTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAtt                      >  2:6341362/1‑93 (MQ=255)

                                                                    gTTCTCTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCAtt                      <  2:5928917/93‑1 (MQ=255)

                                                                      tctcTACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCg                    <  1:6002195/93‑1 (MQ=255)

                                                                        tctACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGaa                  <  1:6156525/93‑1 (MQ=255)

                                                                          tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATc                >  1:5797954/1‑93 (MQ=255)

                                                                          tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATc                >  2:1269246/1‑93 (MQ=255)

                                                                          tACTTCAACGATATTGGCTTCCATGATTCTTCGCCTGTGGTTTGTTTTCCTCTCGTTATCAAAGCGTAAAATATAATGACCTCCATTCGAATc                <  1:5392089/93‑1 (MQ=255)

                                                                           aCTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCt               >  2:4067994/1‑93 (MQ=255)

                                                                            cTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTg              >  2:684255/1‑93 (MQ=255)

                                                                            cTTCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTg              >  2:2370921/1‑93 (MQ=255)

                                                                             ttCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGt             >  2:2490888/1‑93 (MQ=255)

                                                                              tCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTa            <  2:5625202/93‑1 (MQ=255)

                                                                              tCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTa            <  1:1587929/93‑1 (MQ=255)

                                                                              tCAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTa            <  1:717220/93‑1 (MQ=255)

                                                                               cAACGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTAt           <  1:6648057/93‑1 (MQ=255)

                                                                                aaCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATg          <  1:6063709/93‑1 (MQ=255)

                                                                                aaCGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATg          >  2:5406929/1‑93 (MQ=255)

                                                                                  cGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCa        <  1:4621048/93‑1 (MQ=255)

                                                                                  cGATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCa        >  1:3525709/1‑93 (MQ=255)

                                                                                   gATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaa       >  2:2984239/1‑93 (MQ=255)

                                                                                   gATATTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaa       >  1:1102304/1‑93 (MQ=255)

                                                                                    atatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCaaa      >  1:3235265/1‑93 (MQ=255)

                                                                                     tatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAAc     >  1:4027245/1‑93 (MQ=255)

                                                                                     tatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAAc     <  2:2035787/93‑1 (MQ=255)

                                                                                     tatTGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAAc     >  2:4073361/1‑93 (MQ=255)

                                                                                       ttGGCTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTa   >  1:6136967/1‑93 (MQ=255)

GCTCCAGGTAGCGTTTCACTTCCTGCGTAAAGG‑CGCTACCCCGCCTCTCTTCTGACTGCTGAACAAAGTTCTCTACTTCAACGATATTGGTTTCCATGATTCTTCGCCTTTGGTTTGTTTTCCGCTCGTTATCAAAGCGTAAAATATAATGACCACCATTCGAATCTGTATGCAAACTAA  >  NC_000913/1358836‑1359015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`