BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,384,449	G→A	T305T (ACG→ACA)	ycjF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,384,449	0	G	A	100.0%	822.0 / NA	220	T305T (ACG→ACA)	ycjF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (112/108); total (112/108)

Only 100 of 222 total aligned reads displayed.

GCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCA  >  NC_000913/1384359‑1384538

 cgcgAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCa                                                                                        <  1:2455561/93‑1 (MQ=255)

   cgAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACg                                                                                      >  2:5000858/1‑93 (MQ=255)

    gAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGa                                                                                     <  2:3141630/93‑1 (MQ=255)

     aaGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGAc                                                                                    <  1:5701299/93‑1 (MQ=255)

       gTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTc                                                                                  >  2:2290236/1‑93 (MQ=255)

          gggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCggg                                                                               >  2:207795/1‑93 (MQ=255)

           ggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGa                                                                              >  1:3302890/1‑93 (MQ=255)

           ggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGa                                                                              <  2:2666139/93‑1 (MQ=255)

            gATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGAt                                                                             >  2:2497592/1‑93 (MQ=255)

            gATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGAt                                                                             <  1:6309394/93‑1 (MQ=255)

              tGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTa                                                                           <  1:2028711/93‑1 (MQ=255)

              tGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTa                                                                           >  1:954975/1‑93 (MQ=255)

              tGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTa                                                                           >  1:4527328/1‑93 (MQ=255)

               ggACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaa                                                                          <  2:4295876/93‑1 (MQ=255)

               ggACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaa                                                                          >  2:3905489/1‑93 (MQ=255)

                 aCTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAg                                                                        <  2:536227/93‑1 (MQ=255)

                  cTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGc                                                                       <  1:5552724/93‑1 (MQ=255)

                  cTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGc                                                                       >  2:3550385/1‑93 (MQ=255)

                   tGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCt                                                                      >  1:4322411/1‑93 (MQ=255)

                    ggATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTa                                                                     >  1:5965282/1‑93 (MQ=255)

                    ggATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTa                                                                     >  2:6209869/1‑93 (MQ=255)

                     gATGTCGAAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTAt                                                                    <  1:6725907/93‑1 (MQ=255)

                      aTGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTCGTGCAGGACTTCTGACAGCACTACTCGGGATTAAAGCTATg                                                                   <  1:6510646/93‑1 (MQ=255)

                      aTGTCGCAAGATCTCGCTGCTCGTTTGTCGACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATg                                                                   <  1:6599131/93‑1 (MQ=255)

                       tGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATgg                                                                  <  2:4192067/93‑1 (MQ=255)

                        gTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGa                                                                 >  1:1186707/1‑93 (MQ=255)

                        gTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGa                                                                 <  1:2571566/93‑1 (MQ=255)

                         tCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAg                                                                <  1:1027884/93‑1 (MQ=255)

                         tCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAg                                                                >  2:5868844/1‑93 (MQ=255)

                           gCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCt                                                              >  1:83638/1‑93 (MQ=255)

                            cAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCtt                                                             <  1:3996247/93‑1 (MQ=255)

                            cAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCtt                                                             >  2:3766989/1‑93 (MQ=255)

                              aGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTg                                                           >  1:5921628/1‑93 (MQ=255)

                              aGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAACCTATGGAGCTTTg                                                           >  2:6061259/1‑93 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          >  1:4344529/1‑93 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          >  2:4815895/1‑93 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          <  1:1760884/93‑1 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          <  2:145248/93‑1 (MQ=255)

                                aTCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgcc                                                         >  1:5868660/1‑93 (MQ=255)

                                   tcGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgccgcc                                                      <  2:3441967/93‑1 (MQ=255)

                                   tcGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgccgcc                                                      <  1:6248090/93‑1 (MQ=255)

                                     gctgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGccgcccg                                                    <  2:3124143/93‑1 (MQ=255)

                                      ctgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGccgcccgc                                                   >  1:2382096/1‑93 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  >  2:1971774/1‑93 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  <  2:4470412/93‑1 (MQ=255)

                                         ctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGc                                                >  1:550496/1‑93 (MQ=255)

                                          tCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGcc                                               >  1:4916987/1‑93 (MQ=255)

                                          tCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGcc                                               >  2:5062271/1‑93 (MQ=255)

                                          tCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGcc                                               <  2:3620042/93‑1 (MQ=255)

                                          tCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGcc                                               <  2:1594091/93‑1 (MQ=255)

                                            gTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCgg                                             >  1:3221572/1‑92 (MQ=255)

                                              ttGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTgg                                           >  1:4442198/1‑93 (MQ=255)

                                                gTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAt                                         <  1:725867/93‑1 (MQ=255)

                                                gTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAt                                         <  1:4787636/93‑1 (MQ=255)

                                                gTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAt                                         >  2:3950649/1‑93 (MQ=255)

                                                gTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAt                                         <  2:5763751/93‑1 (MQ=255)

                                                 tCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAtt                                        >  2:1479183/1‑93 (MQ=255)

                                                   tACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGa                                      <  2:6633258/93‑1 (MQ=255)

                                                   tACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGa                                      >  1:4563609/1‑93 (MQ=255)

                                                   tACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGa                                      >  1:4703596/1‑93 (MQ=255)

                                                      ccGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGa                                   >  2:2218056/1‑93 (MQ=255)

                                                       cgcgCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGAt                                  >  2:5190783/1‑93 (MQ=255)

                                                        gcgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATg                                 <  1:1256972/93‑1 (MQ=255)

                                                        gcgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATg                                 >  2:602760/1‑93 (MQ=255)

                                                         cgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGa                                <  2:5392/93‑1 (MQ=255)

                                                          gcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGAc                               <  2:4219459/93‑1 (MQ=255)

                                                             gCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACaaa                            >  1:2497667/1‑93 (MQ=255)

                                                              cTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAc                           <  2:6524515/93‑1 (MQ=255)

                                                               tCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcc                          >  1:1085489/1‑93 (MQ=255)

                                                               tCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcc                          <  1:6634200/93‑1 (MQ=255)

                                                                cAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGGTTGACGATGACAAAcct                         <  1:4078883/93‑1 (MQ=255)

                                                                 aGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctc                        <  1:2287223/93‑1 (MQ=255)

                                                                 aGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctc                        <  1:3048477/93‑1 (MQ=255)

                                                                 aGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctc                        <  2:2305974/93‑1 (MQ=255)

                                                                  ggggATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcg                       >  1:2875353/1‑93 (MQ=255)

                                                                   gggATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgc                      >  2:1805996/1‑93 (MQ=255)

                                                                     gATTGGTGCAGGCCTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    <  2:1085533/93‑1 (MQ=255)

                                                                     gATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    <  1:5111456/93‑1 (MQ=255)

                                                                     gATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    >  1:2092618/1‑93 (MQ=255)

                                                                     gATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    <  1:907560/93‑1 (MQ=255)

                                                                      aTTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcctc                   >  1:3468808/1‑93 (MQ=255)

                                                                        tGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCgg                 >  2:2155951/1‑93 (MQ=255)

                                                                        tGGTGCAGCACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCgg                 <  1:142371/93‑1 (MQ=255)

                                                                         ggTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGCCGATGCCAAACCTCGCCTCggg                <  1:935320/93‑1 (MQ=255)

                                                                         ggTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCggg                <  1:2984253/93‑1 (MQ=255)

                                                                          gTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCgggg               <  2:1226409/93‑1 (MQ=255)

                                                                            gCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAt             <  1:5212237/93‑1 (MQ=255)

                                                                            gCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAt             >  2:2241009/1‑93 (MQ=255)

                                                                            gCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAt             >  2:548455/1‑93 (MQ=255)

                                                                             cAGGTCTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACTATGACAAACCTCGCCTCGGGGAtt            <  1:169003/93‑1 (MQ=255)

                                                                             cAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAtt            <  2:5882440/93‑1 (MQ=255)

                                                                              aGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAttt           >  1:1611514/1‑93 (MQ=255)

                                                                               ggACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTc          <  1:2778106/93‑1 (MQ=255)

                                                                                gACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTcc         <  1:428416/93‑1 (MQ=255)

                                                                                 aCTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcg        <  1:3930476/93‑1 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       >  2:6256782/1‑93 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       <  2:6337299/93‑1 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtc      >  2:5810843/1‑93 (MQ=255)

                                                                                       gACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCa  >  2:3007070/1‑93 (MQ=255)

                                                                                       gACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCa  >  1:3410049/1‑93 (MQ=255)

GCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCA  >  NC_000913/1384359‑1384538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`