BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,452,380	T→C	Y144H (TAT→CAT)	ydbO →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,452,380	0	T	C	100.0%	797.8 / NA	243	Y144H (TAT→CAT)	ydbO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/135); total (108/135)

Only 100 of 254 total aligned reads displayed.

AGTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGTATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGCAGC  >  NC_000913/1452290‑1452469

aGTTGGGCTGATATCGGTGTTATCGGCTGTCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCAt                                                                                         <  2:6266785/93‑1 (MQ=255)

aGTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCAt                                                                                         >  2:2780062/1‑93 (MQ=255)

 gTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATg                                                                                        <  2:6597817/93‑1 (MQ=255)

 gTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATg                                                                                        >  1:5560617/1‑93 (MQ=255)

 gTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATg                                                                                        >  2:4781591/1‑93 (MQ=255)

    gggCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCa                                                                                     >  1:3160612/1‑93 (MQ=255)

       cTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCagag                                                                                  <  1:793014/93‑1 (MQ=255)

       cTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCagag                                                                                  >  2:1260057/1‑93 (MQ=255)

         gATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCa                                                                                >  2:6101643/1‑93 (MQ=255)

          atatCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCaa                                                                               <  2:5200985/93‑1 (MQ=255)

          atatCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCaa                                                                               <  2:3929376/93‑1 (MQ=255)

           tatCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAAt                                                                              <  2:1612283/93‑1 (MQ=255)

             tCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATgg                                                                            >  1:858397/1‑93 (MQ=255)

             tCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATgg                                                                            <  1:6589285/93‑1 (MQ=255)

             tCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATgg                                                                            >  2:3657346/1‑93 (MQ=255)

              cGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGt                                                                           <  1:2967226/93‑1 (MQ=255)

                gtgtTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGa                                                                         <  2:1028063/93‑1 (MQ=255)

                 tgtTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGaa                                                                        >  1:2027828/1‑93 (MQ=255)

                 tgtTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGaa                                                                        <  1:1333489/93‑1 (MQ=255)

                  gtTATCGGCTGGCTGGTGGATGGCGCAGCGATCGGCAATCAGGTGGCGGTATGCCGCACTTCTTATGGCCCGCCTGCCAGAGCAATGGGGaaa                                                                       >  2:4966160/1‑93 (MQ=255)

                   ttATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGaaaa                                                                      >  1:5012921/1‑93 (MQ=255)

                    tATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAAt                                                                     <  1:5810696/93‑1 (MQ=255)

                     aTCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATc                                                                    >  1:4434393/1‑93 (MQ=255)

                     aTCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATc                                                                    <  1:1770226/93‑1 (MQ=255)

                       cGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTg                                                                  >  2:4219804/1‑93 (MQ=255)

                       cGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTg                                                                  >  1:2298331/1‑93 (MQ=255)

                        ggctggctGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGc                                                                 <  1:192717/93‑1 (MQ=255)

                        ggctggctGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGc                                                                 >  2:6580796/1‑93 (MQ=255)

                         gctggctgGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCa                                                                >  2:5073335/1‑93 (MQ=255)

                          ctggctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCaa                                                               <  2:2958286/93‑1 (MQ=255)

                           tggctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCaaa                                                              >  2:4479450/1‑93 (MQ=255)

                            ggctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAaag                                                             <  1:4336632/93‑1 (MQ=255)

                            ggctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAaag                                                             <  1:4123349/93‑1 (MQ=255)

                             gctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAaaga                                                            <  2:212906/93‑1 (MQ=255)

                              ctggTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAaagaa                                                           <  2:2472181/93‑1 (MQ=255)

                                ggtggATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAagaaga                                                         <  2:4349290/93‑1 (MQ=255)

                                  tggATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAagaga                                                       <  2:5182364/93‑1 (MQ=255)

                                   ggATGGCTCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAagagag                                                      <  2:3492933/93‑1 (MQ=255)

                                   ggATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAagagag                                                      <  2:1737127/93‑1 (MQ=255)

                                     aTGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGtt                                                    <  2:673722/93‑1 (MQ=255)

                                     aTGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGtt                                                    <  1:4934938/93‑1 (MQ=255)

                                       ggCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGtttt                                                  <  1:3487017/93‑1 (MQ=255)

                                       ggCGCAGCGATCGTAAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGtttt                                                  <  1:3935252/93‑1 (MQ=255)

                                        gcgcAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTc                                                 <  1:2780062/93‑1 (MQ=255)

                                        gcgcAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTc                                                 <  2:3459455/93‑1 (MQ=255)

                                        gcgcAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTc                                                 <  2:425729/93‑1 (MQ=255)

                                          gcAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCTAAGAAGAGAGTTTTCAc                                               <  1:2528587/93‑1 (MQ=255)

                                           cAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCAcc                                              <  1:4681587/93‑1 (MQ=255)

                                            aGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCa                                             <  2:4886079/93‑1 (MQ=255)

                                            aGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCa                                             <  2:3146691/93‑1 (MQ=255)

                                            aGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCAACa                                             >  1:2994313/1‑93 (MQ=255)

                                               gATCGTCAATCAGGTGGTGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCCATAGTGAAAATCTGCAAAGTAGAGAGATTTCACCAGCg                                          >  1:762021/1‑93 (MQ=255)

                                               gATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCg                                          >  1:3956774/1‑93 (MQ=255)

                                               gATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCg                                          >  1:3396381/1‑93 (MQ=255)

                                                aTCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCgc                                         >  2:2224756/1‑92 (MQ=255)

                                                aTCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGt                                         >  2:5603894/1‑93 (MQ=255)

                                                aTCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGt                                         >  2:758907/1‑93 (MQ=255)

                                                aTCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGt                                         >  2:3317435/1‑93 (MQ=255)

                                                 tCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTc                                        >  2:2085095/1‑93 (MQ=255)

                                                 tCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTc                                        >  2:374699/1‑93 (MQ=255)

                                                 tCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTc                                        >  2:1300338/1‑93 (MQ=255)

                                                 tCGTCAATCAGGCGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTc                                        >  2:269132/1‑93 (MQ=255)

                                                  cGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCACATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCa                                       >  1:6051448/1‑93 (MQ=255)

                                                   gTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAg                                      <  1:329911/93‑1 (MQ=255)

                                                    tCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgg                                     >  2:3088860/1‑93 (MQ=255)

                                                    tCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgg                                     >  1:3891320/1‑93 (MQ=255)

                                                    tCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgg                                     <  2:1861155/93‑1 (MQ=255)

                                                    tCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgg                                     >  1:3672095/1‑93 (MQ=255)

                                                     cAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAggg                                    >  1:2753388/1‑93 (MQ=255)

                                                     cAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAggg                                    <  1:38265/93‑1 (MQ=255)

                                                      aaTCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgggg                                   <  2:5911571/93‑1 (MQ=255)

                                                      aaTCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAgggg                                   >  1:524712/1‑93 (MQ=255)

                                                        tCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGtt                                 <  2:5445756/93‑1 (MQ=255)

                                                          aGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTg                               >  1:5849261/1‑93 (MQ=255)

                                                          aGGTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGGTTg                               >  2:1512775/1‑93 (MQ=255)

                                                           ggTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCCATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGa                              >  2:4712109/1‑93 (MQ=255)

                                                           ggTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGa                              >  2:5528163/1‑93 (MQ=255)

                                                            gTGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGaa                             <  1:4810099/93‑1 (MQ=255)

                                                             tGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAg                            <  2:4736856/93‑1 (MQ=255)

                                                             tGGCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAg                            <  1:1013421/93‑1 (MQ=255)

                                                               gCGTTATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGcc                          <  2:2406794/93‑1 (MQ=255)

                                                                   tATGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCa                      <  1:2442306/93‑1 (MQ=255)

                                                                    aTGCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCAt                     <  1:6389848/93‑1 (MQ=255)

                                                                      gCCGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATgg                   >  2:4418614/1‑93 (MQ=255)

                                                                       ccGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGc                  >  2:5466172/1‑93 (MQ=255)

                                                                       ccGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGc                  <  2:1223651/93‑1 (MQ=255)

                                                                        cGCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCa                 <  2:857680/93‑1 (MQ=255)

                                                                         gCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCAc                <  2:2573836/93‑1 (MQ=255)

                                                                         gCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCAc                >  1:4039542/1‑93 (MQ=255)

                                                                         gCACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCAc                <  1:1687010/93‑1 (MQ=255)

                                                                          cACTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACt               >  1:5450188/1‑93 (MQ=255)

                                                                           aCTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTg              >  1:968700/1‑93 (MQ=255)

                                                                           aCTTCTTATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTg              <  2:6399991/93‑1 (MQ=255)

                                                                            cttcttATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTgg             >  2:2332451/1‑93 (MQ=255)

                                                                            cttcttATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTAGAAGCCTGCATGGCACTgg             <  1:6476917/93‑1 (MQ=255)

                                                                             ttcttATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGgc            <  2:4046366/93‑1 (MQ=255)

                                                                               cttATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGgcgc          <  2:5702573/93‑1 (MQ=255)

                                                                                ttATGGCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCa         >  1:4774064/1‑93 (MQ=255)

                                                                                    ggCCCGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGc     <  1:1215601/93‑1 (MQ=255)

                                                                                      cccGCATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGCAg   <  1:5338859/93‑1 (MQ=255)

AGTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGTATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGCAGC  >  NC_000913/1452290‑1452469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`