Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,469,753 T→C intergenic (+1220/‑2492) tra82 → / → ydbC IS30 transposase/putative dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,469,7530TC99.6% 796.2 / ‑4.9 247intergenic (+1220/‑2492)tra82/ydbCIS30 transposase/putative dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (119/126);  total (119/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.58e-01

Only 100 of 250 total aligned reads displayed.

TAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGG  >  NC_000913/1469664‑1469842
                                                                                         |                                                                                         
taatGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCa                                                                                        >  2:371097/1‑93 (MQ=255)
  atGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGa                                                                                      >  1:4066358/1‑93 (MQ=255)
   tGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGaa                                                                                     <  1:5624009/93‑1 (MQ=255)
    gCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAAc                                                                                    <  2:5715269/93‑1 (MQ=255)
    gCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAAc                                                                                    <  1:2496330/93‑1 (MQ=255)
    gCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAAc                                                                                    >  2:4230722/1‑93 (MQ=255)
    gCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAAc                                                                                    <  1:2705766/93‑1 (MQ=255)
        gagaAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCgg                                                                                <  2:4137884/93‑1 (MQ=255)
         agaAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCggg                                                                               <  1:4183374/93‑1 (MQ=255)
          gaAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGACCCATCAATAAAATCGCGCAGAACGCgggg                                                                              <  2:1536465/93‑1 (MQ=255)
          gaAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCgggg                                                                              <  2:1639395/93‑1 (MQ=255)
          gaAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCgggg                                                                              <  1:2531214/93‑1 (MQ=255)
           aaaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCggggg                                                                             >  2:6421383/1‑93 (MQ=255)
           aaaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCggggg                                                                             <  1:1897479/93‑1 (MQ=255)
            aaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCggggga                                                                            >  1:107025/1‑92 (MQ=255)
            aaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCggggga                                                                            >  2:358694/1‑92 (MQ=255)
            aaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGt                                                                            >  2:3307754/1‑93 (MQ=255)
            aaTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCCGGGGt                                                                            >  1:4767613/1‑93 (MQ=255)
             aTGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCgggggaa                                                                           >  2:5278725/1‑91 (MQ=255)
               aaCTGCGCAAATTCCCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTAtt                                                                         <  1:4676945/92‑1 (MQ=255)
                 cTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCa                                                                       >  2:3842451/1‑93 (MQ=255)
                   gcgcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaat                                                                     <  2:4429115/93‑1 (MQ=255)
                   gcgcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaat                                                                     <  2:29041/93‑1 (MQ=255)
                   gcgcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaat                                                                     >  2:5834039/1‑93 (MQ=255)
                   gcgcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaat                                                                     >  1:2598069/1‑93 (MQ=255)
                    cgcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaata                                                                    >  2:1751792/1‑93 (MQ=255)
                     gcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaataa                                                                   <  1:6464224/93‑1 (MQ=255)
                     gcAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaataa                                                                   >  1:284133/1‑93 (MQ=255)
                      cAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCaataat                                                                  >  2:1801921/1‑93 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 <  2:6058957/93‑1 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 <  1:4512348/93‑1 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 >  2:3158862/1‑93 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 >  2:3023917/1‑93 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 <  2:6708199/93‑1 (MQ=255)
                       aaaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAataata                                                                 >  1:6191821/1‑93 (MQ=255)
                        aaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAg                                                                >  2:6165539/1‑93 (MQ=255)
                        aaTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAg                                                                <  2:1072864/93‑1 (MQ=255)
                         aTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGt                                                               >  2:1000310/1‑93 (MQ=255)
                         aTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGt                                                               >  2:1891111/1‑93 (MQ=255)
                         aTTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGt                                                               <  2:2643156/93‑1 (MQ=255)
                          ttACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTg                                                              <  2:2230622/93‑1 (MQ=255)
                             ccATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCa                                                           >  1:3565801/1‑93 (MQ=255)
                              cATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAg                                                          >  2:4991067/1‑93 (MQ=255)
                               aTGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAgt                                                         >  1:6103580/1‑93 (MQ=255)
                               aTGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAgt                                                         <  1:4506926/93‑1 (MQ=255)
                               aTGAATGCTGGTGCTGACAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAgt                                                         <  1:1363520/93‑1 (MQ=255)
                                tGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAgtg                                                        >  2:1717695/1‑93 (MQ=255)
                                tGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAgtg                                                        <  2:435067/93‑1 (MQ=255)
                                  aaTGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTa                                                      >  2:898861/1‑93 (MQ=255)
                                  aaTGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTa                                                      >  1:1172446/1‑93 (MQ=255)
                                    tGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATTGCGCCGAACACGGGGGGATTCAATAATAGATGGAGTGGAAc                                                    >  1:4586674/1‑93 (MQ=255)
                                    tGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAAc                                                    >  2:2208750/1‑93 (MQ=255)
                                    tGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAAc                                                    <  1:5566909/93‑1 (MQ=255)
                                     gCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACa                                                   <  2:478958/93‑1 (MQ=255)
                                      cTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAg                                                  <  2:4663583/93‑1 (MQ=255)
                                      cTGGTGCTGATAGTTCGTTAGTAAACACCACCGGAACAATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAg                                                  <  1:306030/93‑1 (MQ=255)
                                       tGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAgg                                                 <  1:4912104/93‑1 (MQ=255)
                                       tGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAgg                                                 >  1:5969028/1‑93 (MQ=255)
                                       tGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAgg                                                 <  1:5367406/93‑1 (MQ=255)
                                         gTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGc                                               <  2:4151305/93‑1 (MQ=255)
                                          tGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCg                                              <  1:1496461/93‑1 (MQ=255)
                                          tGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCg                                              >  1:6345385/1‑93 (MQ=255)
                                             tGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgat                                           >  2:126267/1‑93 (MQ=255)
                                              gATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatg                                          >  2:3998502/1‑93 (MQ=255)
                                              gATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatg                                          >  2:4915079/1‑93 (MQ=255)
                                               aTAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatga                                         >  2:4467456/1‑93 (MQ=255)
                                               aTAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatga                                         <  1:904671/93‑1 (MQ=255)
                                                tAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatgat                                        <  1:4328903/93‑1 (MQ=255)
                                                tAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGgatgat                                        >  1:3842645/1‑93 (MQ=255)
                                                 aGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGatgatg                                       >  1:6362644/1‑93 (MQ=255)
                                                 aGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGatgatg                                       <  2:2706208/93‑1 (MQ=255)
                                                   ttCGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTc                                     <  2:5667660/93‑1 (MQ=255)
                                                     cGTTAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCgg                                   <  1:662785/93‑1 (MQ=255)
                                                       ttAGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCt                                 >  1:6655756/1‑93 (MQ=255)
                                                         aGTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTgg                               >  1:2882433/1‑93 (MQ=255)
                                                          gTGAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGGATTCAATAATAGTGGCAGTGTAACAGGGAGGGTGATGTCGGCTGGc                              >  1:171306/1‑93 (MQ=255)
                                                            gAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCgg                            <  1:4631510/93‑1 (MQ=255)
                                                            gAACAACACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGCATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCgg                            >  1:727409/1‑93 (MQ=255)
                                                             aacaacACCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCggg                           <  2:5869464/93‑1 (MQ=255)
                                                              acaacaCCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCgggg                          >  1:4921924/1‑93 (MQ=255)
                                                              acaacaCCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCgggg                          >  1:2483481/1‑93 (MQ=255)
                                                              acaacaCCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCgggg                          <  1:2164564/93‑1 (MQ=255)
                                                                aacaCCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTc                        >  1:4014987/1‑93 (MQ=255)
                                                                aacaCCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTc                        <  1:3788114/93‑1 (MQ=255)
                                                                 acacCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCt                       >  1:2310924/1‑93 (MQ=255)
                                                                   acCGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCttt                     >  1:2034929/1‑93 (MQ=255)
                                                                    ccGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCTTta                    >  1:5669975/1‑93 (MQ=255)
                                                                     cGGAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCTTtaa                   >  1:814885/1‑93 (MQ=255)
                                                                      ggAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTtaat                  <  2:883108/93‑1 (MQ=255)
                                                                      ggAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTtaat                  <  2:2869937/93‑1 (MQ=255)
                                                                       gAACCATCAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCTTtaata                 >  1:2627460/1‑93 (MQ=255)
                                                                              cAATAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAAc          <  1:6470829/93‑1 (MQ=255)
                                                                               aaTAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATTAAACt         >  2:2368572/1‑93 (MQ=255)
                                                                               aaTAAAATCGCGCAGAACGCGGGGGTATTCAACAATAGTGGCAGTGTAACAGGACGGATGATGTCGGCTGGCGGGGTCTTTAAAAATCAAACt         <  1:4225936/93‑1 (MQ=255)
                                                                                 tAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGa       <  1:530926/93‑1 (MQ=255)
                                                                                 tAAAATCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGGCTTTAATAATCAAACTGa       >  2:1180725/1‑93 (MQ=255)
                                                                                     aTCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACggg   >  2:1249592/1‑93 (MQ=255)
                                                                                     aTCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACggg   <  1:4371621/93‑1 (MQ=255)
                                                                                      tCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACgggg  <  2:5134338/93‑1 (MQ=255)
                                                                                      tCGCGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACgggg  >  1:1004216/1‑93 (MQ=255)
                                                                                         |                                                                                         
TAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGG  >  NC_000913/1469664‑1469842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: