BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,481,375	C→T	I97I (ATC→ATT)	hrpA →	helicase, ATP‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,481,375	0	C	T	100.0%	772.7 / NA	205	I97I (ATC→ATT)	hrpA	helicase, ATP‑dependent
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (104/101); total (104/101)

Only 100 of 215 total aligned reads displayed.

ACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA  >  NC_000913/1481285‑1481464

gcGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgt                                                                                         <  2:1071632/92‑1 (MQ=255)

  gACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtcg                                                                                       >  2:890780/1‑93 (MQ=255)

   aCCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGc                                                                                      <  2:1705513/93‑1 (MQ=255)

    ccGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGcc                                                                                     >  2:538040/1‑93 (MQ=255)

      ggAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCgg                                                                                   <  2:480711/93‑1 (MQ=255)

      ggAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCgg                                                                                   <  2:2989509/93‑1 (MQ=255)

       gAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCggg                                                                                  <  2:1606779/93‑1 (MQ=255)

         aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGTTCACCAGGTGGTGATTGTCGCCGGGGa                                                                                >  2:2157045/1‑93 (MQ=255)

         aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                                >  1:4348944/1‑93 (MQ=255)

          aTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaa                                                                               >  2:2646033/1‑93 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              <  2:4780549/93‑1 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              >  1:883637/1‑93 (MQ=255)

           ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                              >  1:4676913/1‑93 (MQ=255)

              cTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCGGGTGGTGATTGTCGCCGGGGAAACgg                                                                           <  2:1353533/93‑1 (MQ=255)

              cTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTTGCCGGGGAAACgg                                                                           <  2:1882244/93‑1 (MQ=255)

               ttATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACggg                                                                          >  1:3922046/1‑93 (MQ=255)

               ttATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACggg                                                                          <  2:6437166/93‑1 (MQ=255)

                tATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGt                                                                         <  1:597363/93‑1 (MQ=255)

                tATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTATCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGt                                                                         >  2:4702407/1‑93 (MQ=255)

                 aTCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGtt                                                                        >  2:448829/1‑93 (MQ=255)

                   ccTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCt                                                                      <  1:5542012/93‑1 (MQ=255)

                     tGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTgg                                                                    >  1:5694147/1‑93 (MQ=255)

                     tGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTgg                                                                    <  1:2845590/93‑1 (MQ=255)

                      gACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGt                                                                   <  1:3675892/93‑1 (MQ=255)

                       aCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTa                                                                  >  2:262233/1‑93 (MQ=255)

                         aaTTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTaaa                                                                >  1:4522363/1‑93 (MQ=255)

                             tACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGa                                                            >  1:5622648/1‑93 (MQ=255)

                              aCCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGAc                                                           >  2:4036090/1‑93 (MQ=255)

                              aCCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGAc                                                           <  1:456894/93‑1 (MQ=255)

                               ccGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACt                                                          >  1:2440685/1‑93 (MQ=255)

                                 ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                        <  2:4107398/93‑1 (MQ=255)

                                 ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                        >  2:4532792/1‑93 (MQ=255)

                                 ggTGAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGTAAACGGGTTCTGGTAAAACGACTCa                                                        <  2:2382247/93‑1 (MQ=255)

                                  gTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAg                                                       >  2:1226878/1‑93 (MQ=255)

                                   ttAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                      >  2:2545739/1‑93 (MQ=255)

                                    tAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGtt                                                     <  2:5461589/93‑1 (MQ=255)

                                     aGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTa                                                    <  2:5323568/93‑1 (MQ=255)

                                     aGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTa                                                    <  2:2668712/93‑1 (MQ=255)

                                       tCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCCCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGCTAAAACGACTCAGTTAcc                                                  <  2:3832368/93‑1 (MQ=255)

                                           aaaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACAGGTTCTGGTAAAACGACTCAGTTACCGaaa                                              >  1:947169/1‑93 (MQ=255)

                                            aaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaaa                                             <  2:742079/93‑1 (MQ=255)

                                              aaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATc                                           <  2:2851147/93‑1 (MQ=255)

                                              aaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATc                                           >  2:334898/1‑93 (MQ=255)

                                              aaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATc                                           <  1:4328022/93‑1 (MQ=255)

                                              aaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATc                                           <  1:2240377/93‑1 (MQ=255)

                                               aaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAtgt                                          >  1:2523035/1‑91 (MQ=255)

                                               aaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCt                                          <  1:5913164/93‑1 (MQ=255)

                                                aCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTg                                         <  2:2340888/93‑1 (MQ=255)

                                                aCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTg                                         <  2:4220159/93‑1 (MQ=255)

                                                 cAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGt                                        >  1:4317540/1‑93 (MQ=255)

                                                 cAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGt                                        >  1:3332603/1‑93 (MQ=255)

                                                  aGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTa                                       >  1:5792402/1‑93 (MQ=255)

                                                  aGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGAGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTa                                       <  2:3632504/93‑1 (MQ=255)

                                                   ggACATTCACGAAGCGATTAGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAt                                      >  1:6562186/1‑93 (MQ=255)

                                                    gACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATg                                     <  2:2970130/93‑1 (MQ=255)

                                                     aCATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATgg                                    >  1:5123650/1‑93 (MQ=255)

                                                      cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                   <  2:3797793/93‑1 (MQ=255)

                                                       aTTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAg                                  >  2:490827/1‑93 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 >  2:5098595/1‑93 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 >  1:674194/1‑93 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 >  2:3550550/1‑93 (MQ=255)

                                                        ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                                 >  2:6530719/1‑93 (MQ=255)

                                                         tctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCt                                <  1:31311/93‑1 (MQ=255)

                                                         tctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCt                                <  1:3591151/93‑1 (MQ=255)

                                                         tctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCt                                <  1:5347443/93‑1 (MQ=255)

                                                          ctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTg                               <  2:5239174/93‑1 (MQ=255)

                                                           tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                              <  2:6379292/93‑1 (MQ=255)

                                                             gAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgggg                            <  2:2484261/93‑1 (MQ=255)

                                                              aaGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgc                           >  1:1258462/1‑93 (MQ=255)

                                                               aGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcg                          >  1:1752464/1‑93 (MQ=255)

                                                               aGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcg                          >  2:5490204/1‑93 (MQ=255)

                                                                gCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcgc                         >  2:661587/1‑93 (MQ=255)

                                                                  gATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCgg                       >  2:117220/1‑93 (MQ=255)

                                                                   aTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                      >  1:4412827/1‑93 (MQ=255)

                                                                   aTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                      >  1:6353592/1‑93 (MQ=255)

                                                                   aTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                      >  2:3068094/1‑93 (MQ=255)

                                                                    ttCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGa                     <  2:3997637/93‑1 (MQ=255)

                                                                    ttCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGa                     >  1:6400857/1‑93 (MQ=255)

                                                                    ttCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAAGGAGCTGGGGCGCGGGa                     >  1:5789013/1‑93 (MQ=255)

                                                                     tCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGAt                    <  1:6234401/93‑1 (MQ=255)

                                                                        tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa                 <  1:3032069/93‑1 (MQ=255)

                                                                        tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa                 >  2:499379/1‑93 (MQ=255)

                                                                        tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa                 >  2:3718979/1‑93 (MQ=255)

                                                                         gATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaaa                <  2:6495803/93‑1 (MQ=255)

                                                                          aTCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAg               >  1:2707045/1‑93 (MQ=255)

                                                                          aTCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAg               >  2:545152/1‑93 (MQ=255)

                                                                             aCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAc            <  2:36760/93‑1 (MQ=255)

                                                                             aCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAc            <  1:1344816/93‑1 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt           <  2:2215169/93‑1 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt           >  1:4549900/1‑93 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt           <  1:1452688/93‑1 (MQ=255)

                                                                              ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt           <  2:824253/93‑1 (MQ=255)

                                                                              ccAGGGGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAACCGACTAAGTTACCGAAAATCTGAATGGAGCTGGGGCGCGGGATTAAGGGACt           >  1:2068445/1‑93 (MQ=255)

                                                                                aGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa         <  1:3953/93‑1 (MQ=255)

                                                                                aGGTGGTGATTGTCGCCGGGGAAACGGGGTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa         >  1:4360233/1‑93 (MQ=255)

                                                                                  gtggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATc       <  1:2269518/93‑1 (MQ=255)

                                                                                   tggtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCg      >  1:1635261/1‑93 (MQ=255)

                                                                                      tgATTGTCGCCGGGGAAACGGGTTTTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGcc   <  1:1035263/93‑1 (MQ=255)

                                                                                      tgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGcc   <  1:1922669/93‑1 (MQ=255)

                                                                                       gATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCa  >  1:374113/1‑93 (MQ=255)

ACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCA  >  NC_000913/1481285‑1481464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`