BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,490,230	T→C	intergenic (‑77/‑264)	b1420 ← / → trg	hypothetical protein/methyl‑accepting chemotaxis protein III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,490,230	0	T	C	100.0%	718.7 / NA	218	intergenic (‑77/‑264)	b1420/trg	hypothetical protein/methyl‑accepting chemotaxis protein III
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (103/115); total (103/115)

Only 100 of 228 total aligned reads displayed.

ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCG  >  NC_000913/1490140‑1490319

aTTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGcct                                                                                         >  2:6270649/1‑93 (MQ=255)

 ttGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGcctc                                                                                        >  1:1138521/1‑93 (MQ=255)

 ttGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGcctc                                                                                        >  2:5816215/1‑93 (MQ=255)

    cTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAgg                                                                                     >  1:1450708/1‑93 (MQ=255)

     tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGc                                                                                    >  1:6516218/1‑93 (MQ=255)

     tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGc                                                                                    <  2:3621233/93‑1 (MQ=255)

      aGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCa                                                                                   >  1:6366223/1‑93 (MQ=255)

        gTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCAcc                                                                                 <  2:651698/93‑1 (MQ=255)

            aTTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCa                                                                             <  2:6163832/93‑1 (MQ=255)

            aTTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCa                                                                             <  1:3478790/93‑1 (MQ=255)

             ttCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAg                                                                            >  1:5832530/1‑93 (MQ=255)

             ttCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAg                                                                            <  2:2696551/93‑1 (MQ=255)

             ttCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAg                                                                            <  2:5361108/93‑1 (MQ=255)

               cGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGc                                                                          <  2:2279186/93‑1 (MQ=255)

                gTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCa                                                                         >  2:1349746/1‑93 (MQ=255)

                 ttGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCAt                                                                        <  2:4116035/93‑1 (MQ=255)

                 ttGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCAt                                                                        >  1:6300566/1‑93 (MQ=255)

                   ggCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATcc                                                                      <  1:2837161/93‑1 (MQ=255)

                   ggCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATcc                                                                      >  1:3235709/1‑93 (MQ=255)

                   ggCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATcc                                                                      <  1:2352364/93‑1 (MQ=255)

                   ggCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATcc                                                                      >  1:6365801/1‑93 (MQ=255)

                    gCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCt                                                                     <  2:3827213/93‑1 (MQ=255)

                     ccTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTa                                                                    >  2:1549115/1‑93 (MQ=255)

                       tCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATg                                                                  >  2:2862082/1‑93 (MQ=255)

                       tCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATg                                                                  >  2:2501966/1‑93 (MQ=255)

                       tCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATg                                                                  <  2:80579/93‑1 (MQ=255)

                        cGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGa                                                                 <  1:4801524/93‑1 (MQ=255)

                         ggTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAg                                                                >  1:6174087/1‑93 (MQ=255)

                          gTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAgg                                                               >  1:4291877/1‑93 (MQ=255)

                          gTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAgg                                                               >  1:2729425/1‑93 (MQ=255)

                            tGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGtt                                                             <  2:3198572/93‑1 (MQ=255)

                             gATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGttt                                                            >  1:5224284/1‑93 (MQ=255)

                               tAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTcc                                                          >  2:1040293/1‑93 (MQ=255)

                                aGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCt                                                         <  2:2416196/93‑1 (MQ=255)

                                aGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCt                                                         <  2:5159933/93‑1 (MQ=255)

                                 gAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCtt                                                        >  1:5436484/1‑93 (MQ=255)

                                  aaaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTa                                                       >  1:5523930/1‑93 (MQ=255)

                                  aaaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTa                                                       <  2:5899761/93‑1 (MQ=255)

                                  aaaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTa                                                       <  1:940754/93‑1 (MQ=255)

                                   aaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAg                                                      >  1:3043028/1‑93 (MQ=255)

                                   aaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAg                                                      >  1:2577455/1‑93 (MQ=255)

                                    atatCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAgg                                                     <  1:1880906/93‑1 (MQ=255)

                                     tatCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAggg                                                    <  1:3186782/93‑1 (MQ=255)

                                     tatCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAggg                                                    <  2:1643190/93‑1 (MQ=255)

                                     tatCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAggg                                                    <  1:3732404/93‑1 (MQ=255)

                                     tatCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAggg                                                    <  2:1887268/93‑1 (MQ=255)

                                      atCGTTCGGGTCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGa                                                   <  1:1751965/93‑1 (MQ=255)

                                      atCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGa                                                   >  2:6059567/1‑93 (MQ=255)

                                       tcggtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc                                                  >  1:2251620/1‑93 (MQ=255)

                                       tcggtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc                                                  <  2:1244891/93‑1 (MQ=255)

                                       tcgctcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc                                                  <  2:6563111/93‑1 (MQ=255)

                                          gtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaa                                               >  2:1627193/1‑93 (MQ=255)

                                          gtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaa                                               <  2:4693523/93‑1 (MQ=255)

                                            cggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaaaa                                             <  1:1513674/93‑1 (MQ=255)

                                            cggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCATCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaaaa                                             <  1:1026130/93‑1 (MQ=255)

                                             ggggCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAGGAAaat                                            >  1:339764/1‑93 (MQ=255)

                                              gggCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAaata                                           <  2:789858/93‑1 (MQ=255)

                                               ggCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAaataa                                          <  1:6096267/93‑1 (MQ=255)

                                                 ccTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATc                                        <  2:2070763/93‑1 (MQ=255)

                                                  cTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCa                                       >  1:574296/1‑93 (MQ=255)

                                                   ttCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc                                      >  1:4119260/1‑93 (MQ=255)

                                                   ttCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc                                      >  2:4047201/1‑93 (MQ=255)

                                                   ttCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc                                      >  2:6431301/1‑93 (MQ=255)

                                                   ttCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc                                      <  2:5598064/93‑1 (MQ=255)

                                                   ttCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc                                      >  2:2440792/1‑93 (MQ=255)

                                                    tCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACt                                     <  1:3878878/93‑1 (MQ=255)

                                                      gTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTc                                   <  2:4300224/93‑1 (MQ=255)

                                                       tCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCa                                  >  1:520141/1‑93 (MQ=255)

                                                        cTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCAc                                 <  2:2835801/93‑1 (MQ=255)

                                                         tttCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACg                                >  1:422974/1‑93 (MQ=255)

                                                         tttCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACg                                >  2:6618620/1‑93 (MQ=255)

                                                         tttCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACg                                >  1:3747445/1‑93 (MQ=255)

                                                          ttCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGa                               >  2:4977614/1‑93 (MQ=255)

                                                           tCTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGaa                              >  1:841469/1‑93 (MQ=255)

                                                            cTGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGaaa                             <  1:5258058/93‑1 (MQ=255)

                                                             tGATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAAt                            <  1:338445/93‑1 (MQ=255)

                                                              gATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAAtt                           >  2:1719219/1‑93 (MQ=255)

                                                              gATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAAtt                           >  1:5947564/1‑93 (MQ=255)

                                                              gATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAAtt                           >  1:5968672/1‑93 (MQ=255)

                                                              gATTCCCGGTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAAtt                           >  1:6208354/1‑93 (MQ=255)

                                                                      gTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTg                   <  1:6152530/93‑1 (MQ=255)

                                                                      gTTAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTg                   >  2:5467339/1‑93 (MQ=255)

                                                                       ttAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTGCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGt                  <  1:6511629/93‑1 (MQ=255)

                                                                        tAGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGtt                 <  2:3240794/93‑1 (MQ=255)

                                                                         aGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGttt                <  1:4559562/93‑1 (MQ=255)

                                                                         aGCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGGGATGttt                >  1:4351077/1‑93 (MQ=255)

                                                                          gCCTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGtttt               >  1:3795717/1‑93 (MQ=255)

                                                                           ccTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTc              <  1:5003885/93‑1 (MQ=255)

                                                                           ccTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTc              >  2:1996889/1‑93 (MQ=255)

                                                                            cTGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTcc             >  2:4668920/1‑93 (MQ=255)

                                                                             tGAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCa            >  2:4343617/1‑93 (MQ=255)

                                                                              gAAAACAGAAAGCCTCAGGCCCCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAg           <  2:4011397/93‑1 (MQ=255)

                                                                              gAAAACAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAg           >  2:1430022/1‑93 (MQ=255)

                                                                               aaaaCAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGa          >  1:1967358/1‑93 (MQ=255)

                                                                                aaaCAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGaa         >  1:681307/1‑93 (MQ=255)

                                                                                 aaCAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAAt        <  2:729047/93‑1 (MQ=255)

                                                                                 aaCAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAAt        >  2:2894196/1‑93 (MQ=255)

                                                                                   cAGAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAAttt      <  1:6423012/93‑1 (MQ=255)

                                                                                     gAAAGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAAttttt    >  1:6470702/1‑93 (MQ=255)

                                                                                      aaaGCCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTc   <  1:4737988/93‑1 (MQ=255)

ATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCG  >  NC_000913/1490140‑1490319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`