BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,490,510	C→T	S6L (TCA→TTA)	trg →	methyl‑accepting chemotaxis protein III

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,490,510	0	C	T	100.0%	961.9 / NA	256	S6L (TCA→TTA)	trg	methyl‑accepting chemotaxis protein III
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (118/138); total (118/138)

Only 100 of 260 total aligned reads displayed.

TTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT  >  NC_000913/1490421‑1490598

ttGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTtaca                                                                                       >  1:6008014/1‑93 (MQ=255)

  ggTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGc                                                                                     <  2:5045672/93‑1 (MQ=255)

   gTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCg                                                                                    >  2:6100274/1‑93 (MQ=255)

    tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   <  2:3037515/93‑1 (MQ=255)

    tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   >  1:1747902/1‑93 (MQ=255)

    tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   <  1:4047201/93‑1 (MQ=255)

    tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   >  2:1504735/1‑93 (MQ=255)

    tCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGa                                                                                   <  2:5817945/93‑1 (MQ=255)

     cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt                                                                                  <  1:4135062/93‑1 (MQ=255)

     cATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAt                                                                                  <  1:1881057/93‑1 (MQ=255)

      aTAAGTAATTACCGTCAAGTGGCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAtt                                                                                 >  1:5624092/1‑93 (MQ=255)

      aTAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGAtt                                                                                 <  1:1203597/93‑1 (MQ=255)

       tAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTa                                                                                >  1:4851330/1‑93 (MQ=255)

          gTAATTACNGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt                                                                             <  1:5113685/93‑1 (MQ=255)

          gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt                                                                             >  2:5881965/1‑93 (MQ=255)

          gTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGt                                                                             <  2:1610452/93‑1 (MQ=255)

             aTTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttt                                                                          >  1:5978137/1‑93 (MQ=255)

             aTTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttt                                                                          >  2:4532754/1‑93 (MQ=255)

             aTTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttt                                                                          >  1:2138157/1‑93 (MQ=255)

               tACCGTCACGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGtttttt                                                                        >  1:6555456/1‑93 (MQ=255)

                   gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat                                                                    <  1:6091293/93‑1 (MQ=255)

                   gTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcat                                                                    <  1:4482530/93‑1 (MQ=255)

                    tCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatc                                                                   <  1:718422/93‑1 (MQ=255)

                    tCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatc                                                                   >  1:4574164/1‑93 (MQ=255)

                       aGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcaca                                                                >  2:735649/1‑93 (MQ=255)

                       aGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcaca                                                                <  1:4208461/93‑1 (MQ=255)

                        gTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacat                                                               <  1:5862063/93‑1 (MQ=255)

                        gTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacat                                                               >  2:3876507/1‑93 (MQ=255)

                         tGCCGCTGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatc                                                              <  1:5429697/93‑1 (MQ=255)

                          gCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGcatcacatca                                                             >  2:1295793/1‑93 (MQ=255)

                            cGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAgg                                                           >  2:195198/1‑93 (MQ=255)

                            cGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAgg                                                           >  2:6625548/1‑93 (MQ=255)

                             gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt                                                          >  1:86903/1‑93 (MQ=255)

                             gATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggt                                                          <  1:267617/93‑1 (MQ=255)

                                 aCTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggt                                                      <  1:3076360/93‑1 (MQ=255)

                                  cTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAggttggtt                                                     <  1:2874579/93‑1 (MQ=255)

                                    ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc                                                   >  2:1665880/1‑93 (MQ=255)

                                    ttCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTcc                                                   >  1:2631398/1‑93 (MQ=255)

                                     tCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCg                                                  <  2:865495/93‑1 (MQ=255)

                                      cTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGt                                                 <  2:4638346/93‑1 (MQ=255)

                                      cTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGt                                                 <  1:1631751/93‑1 (MQ=255)

                                       tATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGtt                                                <  1:1588693/93‑1 (MQ=255)

                                        aTCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTa                                               <  1:3203503/93‑1 (MQ=255)

                                         tCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAt                                              <  2:3793921/93‑1 (MQ=255)

                                         tCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAt                                              <  2:2143606/93‑1 (MQ=255)

                                          cAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAtt                                             <  2:2904485/93‑1 (MQ=255)

                                           aGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAttt                                            <  1:5546039/93‑1 (MQ=255)

                                           aGGAGCAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTAttt                                            <  1:4782145/93‑1 (MQ=255)

                                             gAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGc                                          <  1:3611522/93‑1 (MQ=255)

                                               gTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCt                                        >  2:3392103/1‑93 (MQ=255)

                                                tAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTg                                       <  1:6270649/93‑1 (MQ=255)

                                                   aCCTGGACGAGAGACAACGGTAATTAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    <  2:3456194/93‑1 (MQ=255)

                                                   aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    <  2:4612587/93‑1 (MQ=255)

                                                   aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    >  2:4840081/1‑93 (MQ=255)

                                                   aCCTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAt                                    >  2:794341/1‑93 (MQ=255)

                                                    ccTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCAtt                                   >  2:1707232/1‑93 (MQ=255)

                                                     cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc                                  <  2:4052034/93‑1 (MQ=255)

                                                     cTGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTCTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTc                                  <  2:4967648/93‑1 (MQ=255)

                                                      tGGACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCt                                 >  1:3382158/1‑93 (MQ=255)

                                                        gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg                               <  2:5637899/93‑1 (MQ=255)

                                                        gACGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAg                               >  2:438943/1‑93 (MQ=255)

                                                          cGAGAGACAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGc                             >  1:3666922/1‑93 (MQ=255)

                                                           gagagaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCg                            >  2:5259967/1‑93 (MQ=255)

                                                            agagaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCgg                           >  1:6490094/1‑93 (MQ=255)

                                                            agagaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCgg                           >  2:314351/1‑93 (MQ=255)

                                                              agaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTa                         >  2:6168259/1‑93 (MQ=255)

                                                               gaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAt                        >  2:1144143/1‑93 (MQ=255)

                                                               gaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAt                        >  2:1917754/1‑93 (MQ=255)

                                                               gaCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTAt                        >  1:4267646/1‑93 (MQ=255)

                                                                aCAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATc                       >  1:3864676/1‑93 (MQ=255)

                                                                 cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt                      >  1:2031845/1‑93 (MQ=255)

                                                                 cAACGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCt                      <  1:5467339/93‑1 (MQ=255)

                                                                   aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa                    >  1:2224164/1‑93 (MQ=255)

                                                                   aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa                    <  2:3839396/93‑1 (MQ=255)

                                                                   aCGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTa                    >  2:5525142/1‑93 (MQ=255)

                                                                    cGGTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAg                   >  1:4706288/1‑93 (MQ=255)

                                                                     ggTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGt                  <  1:380212/93‑1 (MQ=255)

                                                                     ggTAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGt                  <  1:994017/93‑1 (MQ=255)

                                                                       tAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTc                >  2:6248265/1‑93 (MQ=255)

                                                                       tAATGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTc                >  2:120145/1‑93 (MQ=255)

                                                                        aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt               <  2:2391261/93‑1 (MQ=255)

                                                                        aaTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCt               >  2:3299548/1‑93 (MQ=255)

                                                                         aTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTa              >  1:1398564/1‑93 (MQ=255)

                                                                         aTGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTa              >  2:2241717/1‑93 (MQ=255)

                                                                          tGAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAt             >  1:2563412/1‑93 (MQ=255)

                                                                           gAATACAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAtt            <  2:3725333/93‑1 (MQ=255)

                                                                           gAATACAACTCCCTTACAGCGATTAGGGTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTAtt            >  1:24934/1‑93 (MQ=255)

                                                                                cAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAt       <  1:4321198/93‑1 (MQ=255)

                                                                                cAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAt       >  2:6528646/1‑93 (MQ=255)

                                                                                cAACTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCAt       >  2:2063153/1‑93 (MQ=255)

                                                                                  aCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTa     >  2:2170165/1‑93 (MQ=255)

                                                                                  aCTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTa     >  1:5800619/1‑93 (MQ=255)

                                                                                   cTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTaa    <  2:5352630/93‑1 (MQ=255)

                                                                                   cTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTaa    <  2:4298360/93‑1 (MQ=255)

                                                                                   cTCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTaa    <  2:4800331/93‑1 (MQ=255)

                                                                                    tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg   <  2:5968672/93‑1 (MQ=255)

                                                                                    tCCCTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAg   <  1:2412098/93‑1 (MQ=255)

                                                                                     cccTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGt  <  1:2788223/93‑1 (MQ=255)

                                                                                     cccTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGt  >  2:6652380/1‑93 (MQ=255)

                                                                                     cccTTACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGt  >  1:1473643/1‑93 (MQ=255)

TTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGACAACGGTAATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGT  >  NC_000913/1490421‑1490598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`