BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,529,947	C→T	A36A (GCC→GCT)	ydcC →	putative receptor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,529,947	0	C	T	100.0%	603.3 / NA	169	A36A (GCC→GCT)	ydcC	putative receptor
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (86/83); total (86/83)

Only 100 of 169 total aligned reads displayed.

GATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGA  >  NC_000913/1529857‑1530006

taTGGGCCATATTTTTATTATCCCGGATTCCAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGt                                                           <  1:5223606/92‑1 (MQ=14)

 aTGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGtt                                                          >  1:5211276/1‑93 (MQ=255)

  tGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTa                                                         <  1:4056322/93‑1 (MQ=255)

  tGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTa                                                         >  1:6086982/1‑93 (MQ=255)

  tGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTa                                                         >  2:601315/1‑93 (MQ=255)

   gggACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTAt                                                        <  2:3277899/93‑1 (MQ=255)

    ggACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTAtt                                                       <  2:5545504/93‑1 (MQ=255)

    ggACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTAtt                                                       <  1:4112980/93‑1 (MQ=255)

     gACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTAttt                                                      <  1:2184619/93‑1 (MQ=255)

     gACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTAttt                                                      <  2:2522000/93‑1 (MQ=255)

      aCATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTc                                                     <  1:3921356/93‑1 (MQ=255)

        atatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTg                                                   <  2:5044620/93‑1 (MQ=255)

        atatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTg                                                   >  2:5399371/1‑93 (MQ=255)

        atatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTg                                                   >  2:2115486/1‑93 (MQ=37)

        atatTTCTATTATCCCCGATTACAGACAAGCCGGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTg                                                   >  1:3367232/1‑93 (MQ=255)

         tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTgg                                                  >  2:3184061/1‑93 (MQ=37)

         tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTgg                                                  >  1:3847459/1‑93 (MQ=255)

          atTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGt                                                 >  2:6661525/1‑93 (MQ=255)

          atTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGt                                                 >  2:6117585/1‑93 (MQ=37)

           tttCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTg                                                <  1:1766734/93‑1 (MQ=255)

           tttCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTg                                                >  1:1073080/1‑93 (MQ=255)

               tattatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGa                                            >  1:6616845/1‑93 (MQ=37)

               tattatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGa                                            <  1:4140523/93‑1 (MQ=255)

               tattatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGa                                            <  2:806643/93‑1 (MQ=255)

               tattatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGa                                            >  1:3166172/1‑93 (MQ=37)

                attatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGaa                                           >  2:4439983/1‑93 (MQ=37)

                attatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGaa                                           <  2:4959687/93‑1 (MQ=255)

                 ttatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAg                                          >  1:3038654/1‑93 (MQ=255)

                 ttatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAg                                          >  1:835141/1‑93 (MQ=255)

                 ttatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAg                                          <  1:2585557/93‑1 (MQ=255)

                  tatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAgg                                         >  1:6419558/1‑93 (MQ=255)

                  tatCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAgg                                         >  1:6419557/1‑93 (MQ=255)

                   atCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGc                                        <  2:4598042/93‑1 (MQ=255)

                   atCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGc                                        >  1:350228/1‑93 (MQ=255)

                   atCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGc                                        <  2:6687464/93‑1 (MQ=255)

                    tCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCt                                       <  2:1988949/93‑1 (MQ=255)

                     ccccGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTg                                      >  2:2037351/1‑93 (MQ=255)

                     ccccGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTg                                      <  2:4492341/93‑1 (MQ=255)

                     ccccGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTg                                      >  1:6631674/1‑93 (MQ=255)

                      cccGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTgg                                     >  1:3747459/1‑93 (MQ=255)

                       ccGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTggg                                    >  1:2721216/1‑93 (MQ=37)

                         gATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGag                                  >  2:1475050/1‑92 (MQ=255)

                         gATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGaa                                  <  2:3581630/93‑1 (MQ=255)

                         gATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGaa                                  <  2:2447324/93‑1 (MQ=255)

                          aTTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAg                                 >  1:631613/1‑93 (MQ=255)

                          aTTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAg                                 >  2:3955591/1‑93 (MQ=37)

                          aTTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAg                                 <  1:961627/93‑1 (MQ=255)

                           ttACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGa                                <  1:5345922/93‑1 (MQ=255)

                           ttACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGa                                <  2:4415993/93‑1 (MQ=255)

                           ttACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGa                                <  2:2772771/93‑1 (MQ=255)

                           ttACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGa                                >  2:2420423/1‑93 (MQ=255)

                             aCAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGata                              <  2:2584435/93‑1 (MQ=37)

                             aCAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGata                              >  1:5632118/1‑93 (MQ=255)

                              cAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGTCTGGGAAGatat                             <  2:3592794/93‑1 (MQ=255)

                              cAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGatat                             <  1:3428886/93‑1 (MQ=255)

                               aGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGAtata                            <  2:2714706/93‑1 (MQ=255)

                               aGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGAtata                            <  1:5447630/93‑1 (MQ=255)

                                gACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATag                           >  1:4302464/1‑93 (MQ=255)

                                gACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATag                           >  2:2017455/1‑93 (MQ=255)

                                gACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATag                           >  1:803946/1‑93 (MQ=255)

                                 aCAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATaga                          >  1:4903990/1‑93 (MQ=255)

                                 aCAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATaga                          <  2:1112291/93‑1 (MQ=37)

                                  cAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATagag                         <  2:5653773/93‑1 (MQ=255)

                                  cAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATagag                         >  2:4248363/1‑93 (MQ=255)

                                  cAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATagag                         <  2:6022054/93‑1 (MQ=37)

                                    aGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGa                       <  2:5432838/93‑1 (MQ=255)

                                    aGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGa                       >  1:994954/1‑93 (MQ=37)

                                      ccTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAtt                     <  2:6219730/93‑1 (MQ=37)

                                       cTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAttt                    <  1:1720973/93‑1 (MQ=255)

                                       cTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAttt                    <  2:2222077/93‑1 (MQ=255)

                                       cTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGATGGGAAGATATAGAGGAttt                    <  1:5155549/93‑1 (MQ=255)

                                        tGGAAAATGGAACATAAGTTATCGGCTATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAtttt                   >  2:629892/1‑93 (MQ=255)

                                        tGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAtttt                   >  2:5872287/1‑93 (MQ=255)

                                        tGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGAtttt                   >  2:2886253/1‑93 (MQ=255)

                                         ggAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTg                  <  2:4965386/93‑1 (MQ=255)

                                         ggAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTg                  >  1:1027006/1‑93 (MQ=255)

                                           aaaaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTggg                <  1:1459569/93‑1 (MQ=255)

                                           aaaaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTggg                <  1:4932052/93‑1 (MQ=37)

                                            aaaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTgggg               <  2:887625/93‑1 (MQ=255)

                                            aaaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTgggg               >  2:463118/1‑93 (MQ=255)

                                            aaaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTgggg               <  1:58636/93‑1 (MQ=255)

                                             aaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGa              >  2:3411039/1‑93 (MQ=25)

                                             aaTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGa              >  1:4360397/1‑93 (MQ=255)

                                              aTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGaa             >  2:4878378/1‑93 (MQ=21)

                                              aTGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGaa             >  1:470135/1‑93 (MQ=25)

                                                 gAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAaca          <  2:1493896/93‑1 (MQ=18)

                                                   aCATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAAcaca        >  1:5043806/1‑93 (MQ=21)

                                                    cATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACAt       <  1:2314539/93‑1 (MQ=18)

                                                    cATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACAt       <  2:1223811/93‑1 (MQ=18)

                                                     aTAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATc      <  2:2621601/93‑1 (MQ=18)

                                                      tAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGTGGAAACACATcc     >  1:363588/1‑93 (MQ=16)

                                                      tAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATcc     <  2:5329590/93‑1 (MQ=18)

                                                      tAAGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATcc     >  2:3202789/1‑93 (MQ=18)

                                                       aaGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATccc    <  2:5719125/93‑1 (MQ=18)

                                                       aaGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATccc    <  1:6196346/93‑1 (MQ=18)

                                                       aaGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATccc    <  1:422482/93‑1 (MQ=18)

                                                        aGTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCg   >  2:6600698/1‑93 (MQ=17)

                                                         gTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGa  <  1:6174357/93‑1 (MQ=14)

                                                         gTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAAAACATCCCgt  >  1:4595110/1‑92 (MQ=9)

                                                         gTTATCGGATATTCTACTGTTGACTATTTGTGCTGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGCAAACACATCCCGa  <  1:5926082/93‑1 (MQ=9)

GATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGA  >  NC_000913/1529857‑1530006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`