BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,531,361	T→C	H188R (CAT→CGT)	b1462 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,531,361	0	T	C	100.0%	768.6 / NA	233	H188R (CAT→CGT)	b1462	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (141/92); total (141/92)

Only 100 of 239 total aligned reads displayed.

CTTTGATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531272‑1531450

cTTTGATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCa                                                                                        >  1:1122279/1‑93 (MQ=255)

 tttGATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  2:2542997/1‑93 (MQ=255)

 tttGATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  2:169185/1‑93 (MQ=255)

    gATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGt                                                                                    >  2:799481/1‑93 (MQ=255)

      tAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAt                                                                                  >  1:1857106/1‑93 (MQ=255)

      aaaaaaaACCTGT‑TAATAGCATGATTCCTAAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAt                                                                                  <  1:4335686/92‑1 (MQ=255)

       aaaaaaCCCTGG‑TAATAGCATGAATTCTTAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 <  1:4007760/93‑1 (MQ=255)

       aaaGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  2:4792664/1‑93 (MQ=255)

        aaGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  1:3486429/1‑93 (MQ=255)

         aaaaaCTTGG‑TTACACAATGAATGCAAAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  2:5074928/91‑1 (MQ=255)

         aGAACCCTGT‑TAAAAGCATGAATCCTAAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  2:3639882/93‑1 (MQ=255)

         aGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               >  1:3061187/1‑93 (MQ=255)

          gAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              >  1:1694707/1‑93 (MQ=255)

          agaaCCTGGTTTATAGCATGATTGCTTCC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  2:6616784/91‑1 (MQ=255)

          aaacccTGT‑TTATAGCAAAAATCCTTAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              <  2:1934188/89‑1 (MQ=255)

           aaaCCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGc                                                                             >  2:815309/1‑93 (MQ=255)

               cTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTat                                                                         >  2:5720718/1‑93 (MQ=255)

               cTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTat                                                                         >  1:5152904/1‑93 (MQ=255)

                 gg‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatca                                                                       >  1:6131178/1‑93 (MQ=255)

                  ttttATAGCAAG‑ATGCCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatca                                                                       <  1:5933627/91‑1 (MQ=255)

                   ttaataGAATGATTGCTAAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcat                                                                      <  1:3614619/90‑1 (MQ=255)

                    taataGCAAGACTGCTTAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     <  2:1754048/91‑1 (MQ=255)

                    taataGAATGAATGCTTAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     <  2:6539944/91‑1 (MQ=255)

                         gCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaa                                                                >  1:2048370/1‑93 (MQ=255)

                         gCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaa                                                                >  1:94274/1‑93 (MQ=255)

                          aaTGAATGCTCAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaaa                                                               <  2:4875469/92‑1 (MQ=255)

                           aTGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAAc                                                              >  1:3542126/1‑93 (MQ=255)

                            tGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACt                                                             >  1:516424/1‑93 (MQ=255)

                            tGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACt                                                             >  2:261733/1‑93 (MQ=255)

                             gAATGCTTCA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCACACTg                                                            >  1:6515815/1‑93 (MQ=255)

                             gAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTg                                                            >  2:4849109/1‑93 (MQ=255)

                               aTGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          >  1:2474145/1‑93 (MQ=255)

                               aTGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          >  2:734684/1‑93 (MQ=255)

                               aTGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGCCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          >  2:2954981/1‑93 (MQ=255)

                                 tcTTAC‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAg                                                        <  2:2167897/92‑1 (MQ=255)

                                    ttcccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      <  1:6199126/89‑1 (MQ=255)

                                    tAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCgg                                                     >  2:3708132/1‑93 (MQ=255)

                                     aa‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    >  1:3922680/1‑93 (MQ=255)

                                     aa‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    >  2:3741394/1‑93 (MQ=255)

                                     aa‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    >  1:2595703/1‑93 (MQ=255)

                                      a‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   <  2:6646132/93‑1 (MQ=255)

                                       tgccgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   <  1:3132950/91‑1 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  2:3030426/93‑1 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  2:4247253/93‑1 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  >  1:2221100/1‑93 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:2945293/1‑93 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:4934774/1‑93 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:4861364/1‑93 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGAGGCATTCg                                               >  2:4459904/1‑93 (MQ=255)

                                            ccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGa                                              <  1:5344152/93‑1 (MQ=255)

                                            ccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGa                                              <  2:132947/93‑1 (MQ=255)

                                              gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  1:1565870/1‑93 (MQ=255)

                                              gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  1:4576731/1‑93 (MQ=255)

                                              gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  1:2263920/1‑93 (MQ=255)

                                              gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:1413501/1‑93 (MQ=255)

                                                aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          <  1:4654041/93‑1 (MQ=255)

                                                   acGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGTGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAc                                       >  2:2665854/1‑93 (MQ=255)

                                                   acGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAc                                       <  1:1455146/93‑1 (MQ=255)

                                                    tgCTTGACGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGGCAGCGGCCGTCGACAAATAcc                                      >  1:786763/2‑93 (MQ=255)

                                                    cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:3030803/1‑93 (MQ=255)

                                                      cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCg                                    <  2:3826564/93‑1 (MQ=255)

                                                       ttGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGt                                   <  2:4579909/93‑1 (MQ=255)

                                                        tGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTg                                  <  2:1155631/93‑1 (MQ=255)

                                                          ccGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCg                                <  1:6291033/93‑1 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGTCGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  2:1591510/93‑1 (MQ=255)

                                                             cTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCt                             >  1:1161356/1‑93 (MQ=255)

                                                               ggTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGc                           >  1:675483/1‑93 (MQ=255)

                                                               ggTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGc                           <  2:4058386/93‑1 (MQ=255)

                                                                ggaaCAAACGTCCCAAGACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGcc                          <  2:3359699/91‑1 (MQ=255)

                                                                gTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACGAATACCCGTGCGTCTGcc                          <  2:495727/93‑1 (MQ=255)

                                                                 tAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCg                         >  2:710098/1‑93 (MQ=255)

                                                                  aaCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgc                        <  2:2295309/93‑1 (MQ=255)

                                                                     aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  1:541239/1‑93 (MQ=255)

                                                                     aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  2:5325019/1‑93 (MQ=255)

                                                                      aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACACATACCCGTGCGTCTGCCgctgct                    >  2:5597233/1‑93 (MQ=255)

                                                                      aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgct                    >  1:5522912/1‑93 (MQ=255)

                                                                       aCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGctgctg                   >  2:1276493/1‑93 (MQ=255)

                                                                       aCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGctgctg                   >  2:2827300/1‑93 (MQ=255)

                                                                        cGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGa                  <  2:2007248/93‑1 (MQ=255)

                                                                         gTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAt                 <  1:2713239/93‑1 (MQ=255)

                                                                          tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                <  2:4161377/93‑1 (MQ=255)

                                                                           cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               <  2:844913/93‑1 (MQ=255)

                                                                            ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              >  1:1533874/1‑93 (MQ=255)

                                                                            ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              <  1:5806257/93‑1 (MQ=255)

                                                                              aGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtactac            >  1:744463/1‑93 (MQ=255)

                                                                              aGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtactac            <  2:6628230/93‑1 (MQ=255)

                                                                               gCACCTAAATGACGCAACGTGTTGAGCTTATCATCATCAAACTGGCAGCGGCCTTCGACAAATACCCGTGCGTCTTCCGCTGCTGATaccact           >  1:8949/1‑93 (MQ=255)

                                                                                cACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACtt          >  2:5890994/1‑93 (MQ=255)

                                                                                cACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACtt          <  2:1945365/93‑1 (MQ=255)

                                                                                 aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  1:6595261/1‑93 (MQ=255)

                                                                                  ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:4997552/1‑93 (MQ=255)

                                                                                  ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:3162899/1‑93 (MQ=255)

                                                                                  ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        <  1:697927/93‑1 (MQ=255)

                                                                                   cTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGc       >  2:6362327/1‑93 (MQ=255)

                                                                                   cTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGc       >  1:836577/1‑93 (MQ=255)

                                                                                    tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      <  2:103674/93‑1 (MQ=255)

                                                                                    tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      >  2:3247561/1‑93 (MQ=255)

                                                                                      aaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaa    >  2:6183521/1‑93 (MQ=255)

                                                                                       atgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaaa   >  1:61148/1‑93 (MQ=255)

                                                                                        tgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAc  <  2:3116139/93‑1 (MQ=255)

CTTTGATAAAGAAACCTGG‑TTATAGCATGAATGCTTAA‑CCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531272‑1531450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`