BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,533,355	G→A	A176A (GCC→GCT)	yddE ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,533,355	0	G	A	100.0%	908.9 / NA	244	A176A (GCC→GCT)	yddE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (127/117); total (127/117)

Only 100 of 246 total aligned reads displayed.

GTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGGGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATC  >  NC_000913/1533265‑1533444

gTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGc                                                                                         <  2:5194673/93‑1 (MQ=255)

gTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGc                                                                                         <  1:5466410/93‑1 (MQ=255)

 tttttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCg                                                                                        >  2:165226/1‑93 (MQ=255)

 tttttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCg                                                                                        <  1:3807560/93‑1 (MQ=255)

 tttttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCg                                                                                        >  1:3541118/1‑93 (MQ=255)

  ttttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGt                                                                                       >  1:2384794/1‑93 (MQ=255)

   tttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTc                                                                                      <  2:6622182/93‑1 (MQ=255)

    ttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCg                                                                                     >  2:2807941/1‑93 (MQ=255)

    ttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCg                                                                                     >  2:3911725/1‑93 (MQ=255)

        cTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGatat                                                                                 <  1:1040262/93‑1 (MQ=255)

         tGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATc                                                                                >  1:2548761/1‑93 (MQ=255)

          gggCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATcc                                                                               >  1:643619/1‑93 (MQ=255)

          gggCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATcc                                                                               <  1:6522162/93‑1 (MQ=255)

          gggCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATcc                                                                               >  2:565080/1‑93 (MQ=255)

            gCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCAc                                                                             <  1:3021714/93‑1 (MQ=255)

            gCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCAc                                                                             <  2:5346946/93‑1 (MQ=255)

            gCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCAc                                                                             >  2:5108068/1‑93 (MQ=255)

             cGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACt                                                                            >  2:2612805/1‑93 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          <  1:1573862/93‑1 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          >  1:663372/1‑93 (MQ=255)

                 tCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTGAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCg                                                                        >  2:3813486/1‑93 (MQ=255)

                  cTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCgg                                                                       <  1:281359/93‑1 (MQ=255)

                   tGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGt                                                                      >  2:5422182/1‑93 (MQ=255)

                    ggAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGtt                                                                     >  2:1432751/1‑93 (MQ=255)

                    ggAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGtt                                                                     >  2:5598877/1‑93 (MQ=255)

                    ggAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGtt                                                                     <  2:5904528/93‑1 (MQ=255)

                     gAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGttt                                                                    >  1:941059/1‑93 (MQ=255)

                       aCGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCa                                                                  >  1:4098610/1‑93 (MQ=255)

                       aCGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCa                                                                  <  2:1570618/93‑1 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 <  2:3615781/93‑1 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 <  1:1518734/93‑1 (MQ=255)

                          ggAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTg                                                               <  2:312049/93‑1 (MQ=255)

                            aagaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTggg                                                             <  2:1171711/93‑1 (MQ=255)

                            aagaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTggg                                                             >  1:1805098/1‑93 (MQ=255)

                             agaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGa                                                            >  1:4891815/1‑93 (MQ=255)

                             agaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGa                                                            >  1:6058291/1‑93 (MQ=255)

                             agaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGa                                                            >  1:3159968/1‑93 (MQ=255)

                              gaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGat                                                           >  2:22966/1‑93 (MQ=255)

                              gaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGat                                                           >  1:3386287/1‑93 (MQ=255)

                                aaCCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatca                                                         <  1:5286319/93‑1 (MQ=255)

                                  ccATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatcatc                                                       <  2:2373802/93‑1 (MQ=255)

                                  ccATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatcatc                                                       <  2:3300189/93‑1 (MQ=255)

                                    aTTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     >  2:2597357/1‑93 (MQ=255)

                                    aTTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     >  1:1993092/1‑93 (MQ=255)

                                    aTTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     >  2:1090437/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  2:6598457/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  1:3486897/1‑93 (MQ=255)

                                      tGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACtt                                                   <  2:6079183/93‑1 (MQ=255)

                                      tGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACtt                                                   >  2:6212004/1‑93 (MQ=255)

                                       gCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACttt                                                  <  2:2465996/93‑1 (MQ=255)

                                        cAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACtttt                                                 <  1:698146/93‑1 (MQ=255)

                                          gCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGa                                               >  1:4718161/1‑93 (MQ=255)

                                            cAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgt                                             >  2:209018/1‑93 (MQ=255)

                                            cAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgt                                             >  2:1915012/1‑93 (MQ=255)

                                             aaTCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgtg                                            <  2:3703147/93‑1 (MQ=255)

                                              aTCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgtgt                                           >  2:4091215/1‑93 (MQ=255)

                                               tCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTc                                          >  1:594697/1‑93 (MQ=255)

                                               tCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTc                                          >  1:5476605/1‑93 (MQ=255)

                                                cTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTcc                                         <  2:172774/93‑1 (MQ=255)

                                                cTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTcc                                         <  2:4466177/93‑1 (MQ=255)

                                                 tttttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCt                                        <  1:2901335/93‑1 (MQ=255)

                                                 tttttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGGTTCAGTGGGATCATCACTTTTGAGTGTCCt                                        >  1:734359/1‑93 (MQ=255)

                                                   tttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgt                                      <  2:418273/93‑1 (MQ=255)

                                                    ttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgtt                                     <  1:6157388/93‑1 (MQ=255)

                                                      gCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgttgt                                   <  2:1137390/93‑1 (MQ=255)

                                                       cTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTgttgtt                                  <  2:4396871/93‑1 (MQ=255)

                                                       cTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTgttgtt                                  <  1:5254732/93‑1 (MQ=255)

                                                         gATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGTTAATCATTTTTGAGTGTCCTGTTGTTGc                                >  1:4201889/1‑93 (MQ=255)

                                                           tAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCa                              >  2:386951/1‑93 (MQ=255)

                                                            aGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCAc                             <  2:5813688/93‑1 (MQ=255)

                                                            aGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCAc                             <  1:4236119/93‑1 (MQ=255)

                                                              cGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCt                           <  2:4624244/93‑1 (MQ=255)

                                                              cGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCt                           <  2:6712325/93‑1 (MQ=255)

                                                                 tCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGaa                        >  2:767636/1‑93 (MQ=255)

                                                                  cAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAAt                       <  2:5302265/93‑1 (MQ=255)

                                                                   aGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAAtt                      >  1:4126824/1‑93 (MQ=255)

                                                                   aGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAAtt                      <  1:3084401/93‑1 (MQ=255)

                                                                    gcgcATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     >  2:3116470/1‑93 (MQ=255)

                                                                    gcgcATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     <  2:179813/93‑1 (MQ=255)

                                                                    gcgcATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     >  2:1533475/1‑93 (MQ=255)

                                                                    gcgcATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     >  1:3915194/1‑93 (MQ=255)

                                                                    gcgcATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     <  1:3663131/93‑1 (MQ=255)

                                                                    gcccATTAAGGTCAGGCGAACGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCTCTTTTGAGTGTCCTGTTGTTGCCACCTGAATTg                     <  1:3591637/90‑1 (MQ=255)

                                                                       cATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCa                  >  1:610985/1‑93 (MQ=255)

                                                                       cATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCa                  <  2:6685074/93‑1 (MQ=255)

                                                                        aTTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCaa                 >  2:906867/1‑93 (MQ=255)

                                                                         ttAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCAGGCTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCTAg                >  1:3231252/1‑93 (MQ=255)

                                                                           aaGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGcc              <  1:1186728/93‑1 (MQ=255)

                                                                           aaGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTCCCACCTGAATTGGCAAGcc              <  1:6472560/93‑1 (MQ=255)

                                                                            aGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCt             <  2:4647147/93‑1 (MQ=255)

                                                                            aGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCt             >  1:4796348/1‑93 (MQ=255)

                                                                             ggTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTg            <  1:5762530/93‑1 (MQ=255)

                                                                              gTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTgg           <  1:5051431/93‑1 (MQ=255)

                                                                               tCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGc          <  1:3135053/93‑1 (MQ=255)

                                                                                cAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCa         >  2:2879087/1‑93 (MQ=255)

                                                                                 aGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAg        >  1:1207766/1‑93 (MQ=255)

                                                                                  ggCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGa       >  1:966703/1‑93 (MQ=255)

                                                                                  ggCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGa       >  1:2685937/1‑93 (MQ=255)

                                                                                   gCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGaa      <  2:3211056/93‑1 (MQ=255)

                                                                                       aaGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTATCCTGATGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATc  >  1:4530441/1‑93 (MQ=255)

GTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGGGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATC  >  NC_000913/1533265‑1533444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`