BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,561,521	C→T	S754N (AGC→AAC)	b1489 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,561,521	0	C	T	100.0%	742.0 / NA	208	S754N (AGC→AAC)	b1489	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/108); total (100/108)

Only 100 of 218 total aligned reads displayed.

TATCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGCTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGATT  >  NC_000913/1561431‑1561610

tctCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGttt                                                                                         <  2:1143778/91‑1 (MQ=255)

tatCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGttt                                                                                         >  2:5808292/1‑93 (MQ=255)

tatCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGttt                                                                                         <  1:2249140/93‑1 (MQ=255)

aatCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGttt                                                                                         <  1:3396571/92‑1 (MQ=255)

  tCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTg                                                                                       >  1:6665622/1‑93 (MQ=255)

  tCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTg                                                                                       <  1:905963/93‑1 (MQ=255)

   cccTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGc                                                                                      >  1:3878534/1‑93 (MQ=255)

   cccTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGc                                                                                      >  1:5808051/1‑93 (MQ=255)

   cccTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGc                                                                                      >  1:1519295/1‑93 (MQ=255)

   cccTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGc                                                                                      >  2:5611757/1‑93 (MQ=255)

     cTGAATACCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGccc                                                                                    <  1:3503744/93‑1 (MQ=255)

     cTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGccc                                                                                    >  1:1613711/1‑93 (MQ=255)

     cTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGccc                                                                                    <  1:2577598/93‑1 (MQ=255)

      tGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCa                                                                                   <  1:5325824/93‑1 (MQ=255)

       gAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCaa                                                                                  <  1:3276651/93‑1 (MQ=255)

        aaTAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAAt                                                                                 <  2:2732306/93‑1 (MQ=255)

        aaTAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAAt                                                                                 <  2:3491434/93‑1 (MQ=255)

        aaTAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAAt                                                                                 <  2:748336/93‑1 (MQ=255)

          tAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGc                                                                               >  1:541249/1‑93 (MQ=255)

           aaCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCt                                                                              >  2:4963892/1‑93 (MQ=255)

            aCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTg                                                                             <  2:3001168/93‑1 (MQ=255)

            aCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTg                                                                             >  1:5067768/1‑93 (MQ=255)

            aCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTg                                                                             <  1:6322845/93‑1 (MQ=255)

            aCGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTg                                                                             >  2:3149179/1‑93 (MQ=255)

              gcgACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGt                                                                           <  2:2550186/93‑1 (MQ=255)

                gACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGTCCAATGCTGGTaa                                                                         >  2:929514/1‑93 (MQ=255)

                 aCAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTCAAATTGAGGTTTTGCCCAATGCTGGTAAt                                                                        >  2:6520226/1‑93 (MQ=255)

                  cAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATg                                                                       >  1:1923204/1‑93 (MQ=255)

                   aGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATgg                                                                      <  1:1458235/93‑1 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  1:2673249/1‑93 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  1:3798761/1‑93 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  2:903935/1‑93 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  2:2153214/1‑93 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  2:2418551/1‑93 (MQ=255)

                    gTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGc                                                                     >  1:1835709/1‑93 (MQ=255)

                     tGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCt                                                                    >  1:732433/1‑93 (MQ=255)

                       gATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTc                                                                  <  2:5313592/93‑1 (MQ=255)

                        aTCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCa                                                                 <  1:3282963/93‑1 (MQ=255)

                        aTCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCa                                                                 <  2:3773554/93‑1 (MQ=255)

                           ttGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGt                                                              >  2:4800722/1‑93 (MQ=255)

                           ttGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCACCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGt                                                              >  1:3958109/1‑93 (MQ=255)

                             gCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTaa                                                            <  2:5540462/93‑1 (MQ=255)

                             gCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTaa                                                            <  2:3948872/93‑1 (MQ=255)

                             gCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTaa                                                            <  1:4710906/93‑1 (MQ=255)

                              cGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAg                                                           <  2:1231956/93‑1 (MQ=255)

                                tAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGc                                                         >  1:3691311/1‑93 (MQ=255)

                                 aGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCa                                                        >  2:5884981/1‑93 (MQ=255)

                                 aGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCa                                                        >  2:6101601/1‑93 (MQ=255)

                                 aGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCa                                                        <  1:3721899/93‑1 (MQ=255)

                                   cATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAg                                                      <  1:1075979/93‑1 (MQ=255)

                                   cATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAg                                                      <  1:1539203/93‑1 (MQ=255)

                                    aTCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAgg                                                     >  2:227719/1‑93 (MQ=255)

                                     tctcAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGa                                                    <  1:5937594/93‑1 (MQ=255)

                                     tctcAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGa                                                    <  2:4917729/93‑1 (MQ=255)

                                      ctcAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGAt                                                   <  2:6219299/93‑1 (MQ=255)

                                        cAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGc                                                 <  1:2434088/93‑1 (MQ=255)

                                         aaaTTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCg                                                >  2:1550021/1‑93 (MQ=255)

                                         aaaTTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCg                                                >  2:1922767/1‑93 (MQ=255)

                                           aTTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGtt                                              <  2:4325042/93‑1 (MQ=255)

                                            ttGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGttt                                             >  2:5663514/1‑93 (MQ=255)

                                            ttGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGttt                                             <  2:4491611/93‑1 (MQ=255)

                                             tGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGtttt                                            <  2:4644924/93‑1 (MQ=255)

                                             tGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGtttt                                            <  2:5438797/93‑1 (MQ=255)

                                              gCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGttttt                                           <  2:1645834/93‑1 (MQ=255)

                                              gCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGttttt                                           <  2:5233098/93‑1 (MQ=255)

                                                tctTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCg                                         >  2:5409878/1‑93 (MQ=255)

                                                 ctTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCgg                                        <  1:5745227/93‑1 (MQ=255)

                                                    tGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCa                                     <  1:2412287/93‑1 (MQ=255)

                                                    tGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCa                                     <  2:5113653/93‑1 (MQ=255)

                                                         tCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACaa                                <  1:5149668/93‑1 (MQ=255)

                                                         tCGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACaa                                <  1:111676/93‑1 (MQ=255)

                                                          cGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTACTGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAAc                               <  2:3565634/93‑1 (MQ=255)

                                                          cGACGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAAc                               <  2:6692498/93‑1 (MQ=255)

                                                             cGCCTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGAt                            >  1:4455427/1‑93 (MQ=255)

                                                                cTTCCGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGa                         >  1:531344/1‑93 (MQ=255)

                                                                 tgccGCCACGACGGTTAAATTGAGGTTGTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGAc                        <  1:3560619/91‑1 (MQ=255)

                                                                   ccGCCACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACaa                      <  2:2864593/93‑1 (MQ=255)

                                                                       cACGACGGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACt                  <  1:6105315/93‑1 (MQ=255)

                                                                        aggacgGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACtt                 >  1:4206792/3‑93 (MQ=255)

                                                                        acgacgGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACtt                 <  2:3366794/93‑1 (MQ=255)

                                                                        acgacgGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACtt                 >  1:4673789/1‑93 (MQ=255)

                                                                           acgGTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTg              <  2:5590512/93‑1 (MQ=255)

                                                                              gTTAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCa           >  1:5191840/1‑93 (MQ=255)

                                                                               ttAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCaa          >  2:3248368/1‑93 (MQ=255)

                                                                               ttAAATTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCaa          <  2:1079472/93‑1 (MQ=255)

                                                                                 aaaTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtt        <  1:2003067/93‑1 (MQ=255)

                                                                                 aaaTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtt        >  1:2170623/1‑93 (MQ=255)

                                                                                   aTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtttt      <  2:1015448/93‑1 (MQ=255)

                                                                                   aTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtttt      <  1:6209238/93‑1 (MQ=255)

                                                                                   aTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtttt      >  2:4497613/1‑93 (MQ=255)

                                                                                   aTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtttt      <  1:2781872/93‑1 (MQ=255)

                                                                                   aTTGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAAtttt      <  2:13548/93‑1 (MQ=255)

                                                                                    ttGAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTg     >  1:1287136/1‑93 (MQ=255)

                                                                                     tGAGGTTTTGCCCGATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGa    >  1:6576190/1‑93 (MQ=255)

                                                                                      gAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAt   >  2:6276253/1‑93 (MQ=255)

                                                                                      gAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAt   <  2:203857/93‑1 (MQ=255)

                                                                                      gAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAt   >  1:4827254/1‑93 (MQ=255)

                                                                                      gAGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAt   >  1:305834/1‑93 (MQ=255)

                                                                                       aGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAtt  <  1:6692158/93‑1 (MQ=255)

                                                                                       aGGTTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGAtt  <  1:3364642/93‑1 (MQ=255)

TATCCCTGAATAACGCGACAGTGGATCTTGCGTAGCATCTCAAATTGCTCTTTGGTTTCGACGCCTTCCGCCACGACGGTTAAATTGAGGCTTTGCCCAATGCTGGTAATGGCTTCAAGTAAGGCAAGGATGCGTTTTTCGGTCAGACAACGATCGACAAAACTTTTGTCAATTTTGATT  >  NC_000913/1561431‑1561610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`