BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,596,699	T→C	Q498R (CAG→CGG)	ydeV ←	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,596,699	0	T	C	100.0%	821.3 / NA	250	Q498R (CAG→CGG)	ydeV	putative kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/131); total (119/131)

Only 100 of 257 total aligned reads displayed.

CCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAGCGA  >  NC_000913/1596609‑1596788

ccACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCACC‑AGCCGa                                                                                         >  2:2611958/1‑93 (MQ=255)

 cACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGAt                                                                                        <  2:2742780/93‑1 (MQ=255)

  aCGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATc                                                                                       >  2:419125/1‑93 (MQ=255)

   cGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATcc                                                                                      >  2:3189891/1‑93 (MQ=255)

    ggTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCt                                                                                     >  2:3255791/1‑93 (MQ=255)

     gTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTg                                                                                    <  2:2005100/93‑1 (MQ=255)

     gTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTg                                                                                    <  2:5408474/93‑1 (MQ=255)

      tcatcaTGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGa                                                                                   <  2:4965782/93‑1 (MQ=255)

        atcatGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATa                                                                                 >  2:3771615/1‑93 (MQ=255)

         tcatGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaa                                                                                <  1:2182577/93‑1 (MQ=255)

         tcatGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaa                                                                                >  1:1312840/1‑93 (MQ=255)

         tcatGATGTGGCTGTCAATGAAACTATAACCCAGGCGCCTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaa                                                                                >  1:4930790/1‑93 (MQ=255)

          catGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaaa                                                                               <  1:4856669/93‑1 (MQ=255)

          catGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaaa                                                                               <  1:2545037/93‑1 (MQ=255)

          catGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATaaa                                                                               >  1:5281859/1‑93 (MQ=255)

           atgatgTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAAc                                                                              <  2:5945683/93‑1 (MQ=255)

           atgatgTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAAc                                                                              <  1:5428781/93‑1 (MQ=255)

            tgatgTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAAct                                                                             >  2:6314416/1‑93 (MQ=255)

            tgatgTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGGCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAAct                                                                             <  1:1539860/93‑1 (MQ=255)

            tgatgTGGCAGTAAATGAAACTATAACCCAGGCGCTTTCCAGAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAAct                                                                             <  1:4218455/93‑1 (MQ=255)

              atgTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAActgc                                                                           <  2:1368883/93‑1 (MQ=255)

               tgtgGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAActgcc                                                                          <  2:5248226/93‑1 (MQ=255)

               tgtgGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAActgcc                                                                          <  1:2280200/93‑1 (MQ=255)

                gtgGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATCAActgcct                                                                         >  1:3712185/1‑93 (MQ=255)

                 tgGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAActgcctg                                                                        >  1:2832655/1‑93 (MQ=255)

                 tgGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAActgcctg                                                                        <  1:2175731/93‑1 (MQ=255)

                      gTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACt                                                                   <  2:3954048/93‑1 (MQ=255)

                      gTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACt                                                                   >  2:81239/1‑93 (MQ=255)

                       tCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACtt                                                                  <  1:5712641/93‑1 (MQ=255)

                        cAATGAAACTATACCCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTa                                                                 <  2:3485954/93‑1 (MQ=255)

                        cAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTa                                                                 <  1:1893748/93‑1 (MQ=255)

                         aaTGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTAt                                                                >  2:2840398/1‑93 (MQ=255)

                         aaTGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTAt                                                                <  2:6594224/93‑1 (MQ=255)

                          aTGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATc                                                               <  2:4684726/93‑1 (MQ=255)

                           tGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATcg                                                              >  2:550434/1‑93 (MQ=255)

                           tGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATcg                                                              >  2:1280256/1‑93 (MQ=255)

                              aaCTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGt                                                           <  2:5707041/93‑1 (MQ=255)

                               aCTATACCCCAGGCGTTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTg                                                          <  1:5097205/93‑1 (MQ=255)

                               aCTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTg                                                          <  2:1250835/93‑1 (MQ=255)

                                 tataACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGaa                                                        <  2:1685997/93‑1 (MQ=255)

                                   taccccAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATc                                                      <  2:1408178/90‑1 (MQ=255)

                                    aaCCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATcc                                                     <  1:3592267/93‑1 (MQ=255)

                                     aCCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCCAAGCCGACCCTGTTAAACTGCCTGCCACTTACCGCGTGAATct                                                     >  2:3630301/1‑92 (MQ=255)

                                     aCCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCt                                                    >  1:1780294/1‑93 (MQ=255)

                                      cccAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTg                                                   <  1:5227372/93‑1 (MQ=255)

                                       ccAGGCGCTTTCCATAACGACCTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGa                                                  >  1:3505628/1‑93 (MQ=255)

                                        cAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGAt                                                 <  1:3198183/93‑1 (MQ=255)

                                        cAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGAt                                                 <  2:6138357/93‑1 (MQ=255)

                                         aGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATa                                                <  1:5968872/93‑1 (MQ=255)

                                          ggCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATaa                                               >  1:3892135/1‑93 (MQ=255)

                                          ggCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATaa                                               >  2:5327241/1‑93 (MQ=255)

                                           gcgcTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATaaa                                              <  1:5573226/93‑1 (MQ=255)

                                             gcTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGt                                            >  2:6663909/1‑93 (MQ=255)

                                             gcTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGt                                            <  2:173958/93‑1 (MQ=255)

                                                ttCCATAACGACGTCGTGAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCa                                         <  1:3302051/93‑1 (MQ=255)

                                                ttCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCa                                         <  1:3681815/93‑1 (MQ=255)

                                                 tCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCAt                                        <  2:4614233/93‑1 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      <  2:5756597/93‑1 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      >  1:4418686/1‑93 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      >  2:3335788/1‑93 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      <  1:1266916/93‑1 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      <  1:237626/93‑1 (MQ=255)

                                                   cATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGc                                      <  1:3087835/93‑1 (MQ=255)

                                                    aTAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCt                                     >  1:5133620/1‑93 (MQ=255)

                                                    aTAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCt                                     >  2:513622/1‑93 (MQ=255)

                                                       acgacgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCtttt                                  <  1:3772050/93‑1 (MQ=255)

                                                        cgacgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTc                                 <  2:1863360/93‑1 (MQ=255)

                                                        cgacgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTc                                 >  2:2486963/1‑93 (MQ=255)

                                                         gccgtcgtCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTcc                                <  1:2017740/91‑1 (MQ=255)

                                                         gacgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTcc                                <  2:1074421/93‑1 (MQ=255)

                                                         gacgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTcc                                <  2:2179922/93‑1 (MQ=255)

                                                          acgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCg                               >  1:828823/1‑93 (MQ=255)

                                                          acgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCg                               >  1:1146/1‑93 (MQ=255)

                                                          acgTCGTCAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCg                               >  1:6269308/1‑93 (MQ=255)

                                                             tcgtcAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGt                            >  1:474240/1‑93 (MQ=255)

                                                               gtcAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCt                          <  1:2865964/93‑1 (MQ=255)

                                                               gtcAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCt                          >  1:3368599/1‑93 (MQ=255)

                                                                tcAGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTg                         >  1:2645272/1‑93 (MQ=255)

                                                                  aGTCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgt                       >  2:4923139/1‑93 (MQ=255)

                                                                    tCCATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgtgt                     <  1:4521414/93‑1 (MQ=255)

                                                                     ccATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgtgtg                    <  1:4081759/93‑1 (MQ=255)

                                                                      cATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgtgtgt                   >  1:2744985/1‑93 (MQ=255)

                                                                      cATGATCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgtgtgt                   <  2:1096928/93‑1 (MQ=255)

                                                                      cATGATCAACCAGACCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGgtgtgt                   >  1:6216743/1‑93 (MQ=255)

                                                                          aTCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGt               >  1:1853430/1‑93 (MQ=255)

                                                                          aTCAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGt               >  1:6574939/1‑93 (MQ=255)

                                                                            cAACCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTcc             >  2:1472195/1‑93 (MQ=255)

                                                                              aCCAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGt           >  1:5772298/1‑93 (MQ=255)

                                                                               ccagcccc‑agccGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGtt          <  1:4990661/93‑1 (MQ=255)

                                                                               ccagcccc‑agccGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGtt          >  1:4659473/1‑93 (MQ=255)

                                                                                cAGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTc         >  1:6689841/1‑93 (MQ=255)

                                                                                 aGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTcc        >  2:2218380/1‑93 (MQ=255)

                                                                                 aGCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTcc        <  2:27027/93‑1 (MQ=255)

                                                                                  gCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTccc       <  2:3002627/93‑1 (MQ=255)

                                                                                  gCCCC‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTccc       >  2:3851171/1‑93 (MQ=255)

                                                                                    ccc‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAg     <  1:1010251/93‑1 (MQ=255)

                                                                                    ccc‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAg     <  2:6507474/93‑1 (MQ=255)

                                                                                     cc‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAGc    <  2:6019356/93‑1 (MQ=255)

                                                                                     cc‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAGc    <  2:3662674/93‑1 (MQ=255)

                                                                                     cc‑AGCCGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAGc    >  2:260603/1‑93 (MQ=255)

CCACGGTCATCATGATGTGGCTGTCAATGAAACTATAACCCAGGCGCTTTCCATAACGACGTCGTCAGTCCATGATCAACCAGCCCC‑AGCTGATCCTGATAAACTGCCTGCCACTTATCGCGTGAATCCTGATAAAGTTCATGCTTTTCCGGGTCTGGTGTGTGCGTCCGTTCCCAGCGA  >  NC_000913/1596609‑1596788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`