BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,599,102	T→C	H55R (CAT→CGT)	ydeW ←	putative transcriptional regulator, sorC family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,599,102	0	T	C	100.0%	738.1 / NA	223	H55R (CAT→CGT)	ydeW	putative transcriptional regulator, sorC family
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/100); total (123/100)

Only 100 of 226 total aligned reads displayed.

GCAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGATGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATAGTAA  >  NC_000913/1599013‑1599191

gCAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGcc                                                                                        >  1:3279573/1‑93 (MQ=255)

gCAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGcc                                                                                        >  2:312089/1‑93 (MQ=255)

gCAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGcc                                                                                        >  2:4658367/1‑93 (MQ=255)

 cAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGccc                                                                                       >  1:4426742/1‑93 (MQ=255)

 cAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGccc                                                                                       <  1:5107483/93‑1 (MQ=255)

     gAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTtc                                                                                   >  1:4685735/1‑93 (MQ=255)

     gAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTtc                                                                                   <  2:6527138/93‑1 (MQ=255)

      aaaaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTtct                                                                                  <  2:585623/93‑1 (MQ=255)

      aaaaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTtct                                                                                  >  2:5704968/1‑93 (MQ=255)

       aaaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTtctc                                                                                 <  1:2139701/93‑1 (MQ=255)

        aaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTcc                                                                                >  2:4141399/1‑93 (MQ=255)

        aaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTcc                                                                                >  1:4146674/1‑93 (MQ=255)

        aaCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTcc                                                                                >  1:5954005/1‑93 (MQ=255)

         aCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCa                                                                               >  1:5008120/1‑93 (MQ=255)

         aCTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCa                                                                               <  2:1311667/93‑1 (MQ=255)

           tGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGc                                                                             >  1:1075508/1‑93 (MQ=255)

           tGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGc                                                                             <  2:6366801/93‑1 (MQ=255)

           tGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGc                                                                             >  1:3723095/1‑93 (MQ=255)

             gcgacgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCaa                                                                           <  1:2151179/92‑1 (MQ=255)

               gacgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATc                                                                         >  1:1902213/1‑93 (MQ=255)

               gacgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATc                                                                         >  1:5135455/1‑93 (MQ=255)

                acgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcg                                                                        <  1:5942303/93‑1 (MQ=255)

                acgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcg                                                                        >  1:3465760/1‑93 (MQ=255)

                acgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcg                                                                        >  1:2184958/1‑93 (MQ=255)

                acgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcg                                                                        <  2:4843486/93‑1 (MQ=255)

                 cgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcgc                                                                       <  1:3946049/93‑1 (MQ=255)

                 cgTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcgc                                                                       <  1:1016852/93‑1 (MQ=255)

                  gTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATcgcg                                                                      <  2:5599687/93‑1 (MQ=255)

                    aaTTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGac                                                                    <  2:4907790/93‑1 (MQ=255)

                    aaTTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGac                                                                    >  1:1642358/1‑93 (MQ=255)

                     aTTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGaca                                                                   <  2:293591/93‑1 (MQ=255)

                     aTTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGaca                                                                   >  2:837736/1‑93 (MQ=255)

                      ttGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGacac                                                                  >  1:6400799/1‑93 (MQ=255)

                       tGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACt                                                                 <  2:1986418/93‑1 (MQ=255)

                        gAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACtt                                                                <  2:1771944/93‑1 (MQ=255)

                        gAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACtt                                                                >  2:2914241/1‑93 (MQ=255)

                          gTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTc                                                              >  2:1039369/1‑93 (MQ=255)

                            ttCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCaa                                                            >  2:2309187/1‑93 (MQ=255)

                             tCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCaaa                                                           >  2:5275512/1‑93 (MQ=255)

                              cATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAAc                                                          >  1:4256740/1‑93 (MQ=255)

                              cATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAAc                                                          <  2:4491655/93‑1 (MQ=255)

                               atatTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACg                                                         >  2:2183121/1‑93 (MQ=255)

                                tatTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACgt                                                        >  2:2077555/1‑93 (MQ=255)

                                tatTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACgt                                                        >  2:3828669/1‑93 (MQ=255)

                                 atTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACgtg                                                       >  1:3261952/1‑93 (MQ=255)

                                  ttCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACgtgt                                                      >  2:3646283/1‑93 (MQ=255)

                                   tCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTc                                                     <  2:4204393/93‑1 (MQ=255)

                                    ccAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCa                                                    <  1:5999725/93‑1 (MQ=255)

                                     cAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAg                                                   <  2:5141910/93‑1 (MQ=255)

                                       gACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGc                                                 >  2:3339467/1‑93 (MQ=255)

                                         cAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCg                                               >  1:1675770/1‑93 (MQ=255)

                                           gCCTTCAGAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCgag                                             <  2:2972371/93‑1 (MQ=255)

                                           gCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCgag                                             >  1:3042267/1‑93 (MQ=255)

                                            ccTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCgaga                                            >  2:4477682/1‑93 (MQ=255)

                                            ccTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCgaga                                            <  1:4947904/93‑1 (MQ=255)

                                            ccTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCgaga                                            >  1:1370430/1‑93 (MQ=255)

                                              ttCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACg                                          <  1:3605589/93‑1 (MQ=255)

                                                cAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGAt                                        <  2:5346555/93‑1 (MQ=255)

                                                 aaaGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATc                                       >  1:2925615/1‑93 (MQ=255)

                                                 aaaGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATc                                       >  2:3842630/1‑93 (MQ=255)

                                                 aaaGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATc                                       >  1:6252144/1‑93 (MQ=255)

                                                   aGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGc                                     >  1:984210/1‑93 (MQ=255)

                                                   aGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGc                                     <  2:2799437/93‑1 (MQ=255)

                                                    gCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCt                                    >  1:2856222/1‑93 (MQ=255)

                                                    gCGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCt                                    >  2:80000/1‑93 (MQ=255)

                                                     cGAGAATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTg                                   <  1:2773372/93‑1 (MQ=255)

                                                      gagaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGa                                  >  2:403814/1‑93 (MQ=255)

                                                        taaTTAATCTGTACGCGAATAATGCCGGACTGACGCCGTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACCATCGCTGAtc                                <  1:5329599/92‑1 (MQ=255)

                                                        gaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtc                                <  2:4424035/93‑1 (MQ=255)

                                                        gaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtc                                <  1:2930888/93‑1 (MQ=255)

                                                        gaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtc                                <  1:4374161/93‑1 (MQ=255)

                                                        gaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtc                                >  1:2983279/1‑93 (MQ=255)

                                                        gaATTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtc                                >  2:1220523/1‑93 (MQ=255)

                                                         aaTTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtct                               <  1:1850723/93‑1 (MQ=255)

                                                         aaTTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtct                               <  1:5484818/93‑1 (MQ=255)

                                                         aaTTAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGAtct                               >  2:4538972/1‑93 (MQ=255)

                                                            tAATCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGc                            <  2:2730291/93‑1 (MQ=255)

                                                              aTCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGctc                          <  2:1702144/93‑1 (MQ=255)

                                                              aTCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGctc                          >  1:6650842/1‑93 (MQ=255)

                                                               tCTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCTAACGTGTCAGGCCGAGACGATCGCTGATCTCGctct                         >  2:6727776/1‑93 (MQ=255)

                                                                cTGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTg                        >  2:503296/1‑93 (MQ=255)

                                                                 tGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTgg                       <  1:4892960/93‑1 (MQ=255)

                                                                 tGTACGCGAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTgg                       >  2:1064053/1‑93 (MQ=255)

                                                                 tGTACGCGAAAAATGCCGGACTGACGCCCTTTCTCCAGCAATTGCGACACTTTCATACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTgg                       >  1:4074151/1‑93 (MQ=255)

                                                                     cgcgAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCa                   >  1:6170481/1‑93 (MQ=255)

                                                                     cgcgAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCa                   <  1:886860/93‑1 (MQ=255)

                                                                       cgAATAATGCCTGACTGCCGCCCTTTCCCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGACCTCGCTCTGGGTCAGc                 <  1:5537987/93‑1 (MQ=255)

                                                                        gAATAATGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGcc                <  1:2497978/93‑1 (MQ=255)

                                                                         aataatGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGccc               >  2:4734360/1‑93 (MQ=255)

                                                                         aataatGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGccc               >  1:1282798/1‑93 (MQ=255)

                                                                           taatGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCcgt             <  1:2283035/93‑1 (MQ=255)

                                                                            aatGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCcgtc            <  1:2671865/93‑1 (MQ=255)

                                                                              tGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCcgtcgt          >  1:2473256/1‑93 (MQ=255)

                                                                              tGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCcgtcgt          <  1:4040972/93‑1 (MQ=255)

                                                                              tGCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCcgtcgt          <  2:2028356/93‑1 (MQ=255)

                                                                               gCCGGACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTg         >  2:5175101/1‑93 (MQ=255)

                                                                                  ggACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATa      >  1:5434159/1‑93 (MQ=255)

                                                                                   gACTGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATAg     >  2:5543664/1‑93 (MQ=255)

                                                                                      tGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATAGTaa  >  2:5904972/1‑93 (MQ=255)

                                                                                      tGACGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATAGTaa  <  2:2946344/93‑1 (MQ=255)

GCAGCGAAAACTGACGACGTAATTGAGTTTCATATTCCAGACAGCCTTCAAAGCGAGAATTAATCTGTACGCGAATAATGCCGGACTGATGCCCTTTCTCCAGCAATCGCGACACTTTCAAACGTGTCAGGCCGAGACGATCGCTGATCTCGCTCTGGGTCAGCCCGTCGTGATAGTAA  >  NC_000913/1599013‑1599191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`