BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	178,128	A→G	I112T (ATT→ACT)	yadT ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	178,128	0	A	G	100.0%	792.4 / NA	238	I112T (ATT→ACT)	yadT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/124); total (114/124)

Only 100 of 249 total aligned reads displayed.

TGATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAATGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCAATC  >  NC_000913/178038‑178217

tGATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTg                                                                                         >  2:1843783/1‑93 (MQ=255)

tGATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTg                                                                                         >  1:3489221/1‑93 (MQ=255)

 gATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGc                                                                                        >  1:5686598/1‑93 (MQ=255)

 gATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGc                                                                                        >  1:4669400/1‑93 (MQ=255)

  aTCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCt                                                                                       <  1:1409110/93‑1 (MQ=255)

   tCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCtt                                                                                      >  1:3390011/1‑93 (MQ=255)

    ccAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTg                                                                                     <  2:3470395/93‑1 (MQ=255)

    ccAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTg                                                                                     <  2:2633214/93‑1 (MQ=255)

     cagcagGGATTGCGCGGCTTGTTCGGCCTTTTCTGGTTGCGGGCTCCAGGGGGCCAGTGGAGGGAAGGCATTGCCAATTTGTCCAGTGCTTgc                                                                                    >  2:1482508/1‑92 (MQ=255)

     cagcagGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGt                                                                                    >  2:1277494/1‑93 (MQ=255)

      agcagGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTc                                                                                   <  1:3725959/93‑1 (MQ=255)

      agcagGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTc                                                                                   <  2:295980/93‑1 (MQ=255)

       gcagGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCg                                                                                  >  1:6111453/1‑93 (MQ=255)

       gcagGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCg                                                                                  >  2:5725222/1‑93 (MQ=255)

          gggATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCAt                                                                               <  2:2764420/93‑1 (MQ=255)

             aTTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGa                                                                            <  1:5094015/93‑1 (MQ=255)

             aTTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGa                                                                            >  1:494717/1‑93 (MQ=255)

             aTTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGa                                                                            <  2:5941905/93‑1 (MQ=255)

              ttGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGAc                                                                           >  1:4898810/1‑93 (MQ=255)

               tGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGAcc                                                                          <  2:3218350/93‑1 (MQ=255)

               tGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGAcc                                                                          >  2:5516542/1‑93 (MQ=255)

                   cgGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGGCAGTTGACGTAACGCATTGGCACTTTGTTCAGTGCTTGTCGCATCGACCccca                                                                      >  2:2506593/1‑93 (MQ=255)

                    ggCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACAt                                                                     >  2:2026893/1‑93 (MQ=255)

                    ggCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACAt                                                                     <  1:2226748/93‑1 (MQ=255)

                     gCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATc                                                                    <  1:1953364/93‑1 (MQ=255)

                     gCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATc                                                                    >  1:5840091/1‑93 (MQ=255)

                      cTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCa                                                                   >  2:4702100/1‑93 (MQ=255)

                       ttGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCAc                                                                  >  2:3393654/1‑93 (MQ=255)

                       ttGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCAc                                                                  <  2:2862156/93‑1 (MQ=255)

                        tggtCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACt                                                                 <  2:1725081/90‑1 (MQ=255)

                           tCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACtttt                                                              >  2:4925727/1‑93 (MQ=255)

                           tCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACtttt                                                              <  1:6555189/93‑1 (MQ=255)

                            cGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTa                                                             <  2:1408775/93‑1 (MQ=255)

                            cGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTa                                                             >  2:5690065/1‑93 (MQ=255)

                            cGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTa                                                             <  1:3036310/93‑1 (MQ=255)

                             ggCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTAt                                                            >  1:778558/1‑93 (MQ=255)

                              gCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTAtt                                                           <  2:2729734/93‑1 (MQ=255)

                              gCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTAtt                                                           >  2:6556058/1‑93 (MQ=255)

                              gCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTAtt                                                           >  2:2122006/1‑93 (MQ=255)

                               ccTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTc                                                          >  2:4744588/1‑93 (MQ=255)

                                cTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTcc                                                         <  2:1631814/93‑1 (MQ=255)

                                 ttGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTccc                                                        >  1:3328934/1‑93 (MQ=255)

                                 ttGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTccc                                                        <  1:2092558/93‑1 (MQ=255)

                                  tGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCa                                                       <  1:4088586/93‑1 (MQ=255)

                                       ggTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGaa                                                  <  2:4588495/93‑1 (MQ=255)

                                       ggTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGaa                                                  <  2:422695/93‑1 (MQ=255)

                                       ggTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGaa                                                  <  1:4178222/93‑1 (MQ=255)

                                        gTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAg                                                 >  2:3233369/1‑93 (MQ=255)

                                          tGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGcc                                               <  1:6160916/93‑1 (MQ=255)

                                           gCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCa                                              <  2:3026467/93‑1 (MQ=255)

                                              gACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCt                                           <  2:3913919/93‑1 (MQ=255)

                                              gACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCt                                           >  1:20307/1‑93 (MQ=255)

                                              gACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCt                                           >  1:4547921/1‑93 (MQ=255)

                                                 tCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGt                                        <  1:3416679/93‑1 (MQ=255)

                                                  ccAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTc                                       <  2:2838335/93‑1 (MQ=255)

                                                    aGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGCAGCCAGCTGGTCaa                                     >  1:2499726/1‑93 (MQ=255)

                                                    aGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCaa                                     <  1:3961127/93‑1 (MQ=255)

                                                     gggggCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAAc                                    >  1:6391727/1‑93 (MQ=255)

                                                      ggggCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCTCTTTTATTCCCAGCGAAGCCAGCTGGTCAAcc                                   <  2:4047589/93‑1 (MQ=255)

                                                       gggCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCt                                  >  1:178580/1‑93 (MQ=255)

                                                        ggCCAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTg                                 >  1:2693792/1‑93 (MQ=255)

                                                          gcAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGACGCATCGCCCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGcc                               <  2:4298512/92‑1 (MQ=255)

                                                          ccAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGcc                               <  1:5964619/93‑1 (MQ=255)

                                                          ccAGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGcc                               <  2:4543665/93‑1 (MQ=255)

                                                            aGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGc                             <  2:2592753/93‑1 (MQ=255)

                                                            aGTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGc                             <  1:1956693/93‑1 (MQ=255)

                                                             gTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCt                            >  1:3017875/1‑93 (MQ=255)

                                                             gTTGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTACCGCt                            >  2:1965779/1‑93 (MQ=255)

                                                              ttGACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTc                           >  2:3603270/1‑93 (MQ=255)

                                                                gACGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCgg                         <  1:923144/93‑1 (MQ=255)

                                                                 aCGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGc                        <  2:5589352/93‑1 (MQ=255)

                                                                 aCGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGc                        >  2:6290800/1‑93 (MQ=255)

                                                                  cGTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGcg                       <  1:6434955/93‑2 (MQ=255)

                                                                   gTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGCCCCACATCACTTTTATTCCCAGCGAAGCCAGCTGTTCAACCTGCCGCTCGGCAt                      <  1:1088069/93‑1 (MQ=255)

                                                                   gTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCAt                      >  2:2248316/1‑93 (MQ=255)

                                                                   gTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCAt                      <  1:2355699/93‑1 (MQ=255)

                                                                   gTAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCAt                      <  2:4864201/93‑1 (MQ=255)

                                                                    tAACGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCAtt                     <  2:6424270/93‑1 (MQ=255)

                                                                     aaCGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTa                    >  2:1150978/1‑93 (MQ=255)

                                                                       cGCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTccc                  >  1:1971648/1‑93 (MQ=255)

                                                                        gCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCt                 >  2:3638062/1‑93 (MQ=255)

                                                                        gCATTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCt                 >  1:6321341/1‑93 (MQ=255)

                                                                          aTTGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGTTCAACCTGCCGCTCGGCATTACCTcc               >  2:50680/1‑93 (MQ=255)

                                                                           ttGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTccc              >  1:4393006/1‑92 (MQ=255)

                                                                           ttGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCa              <  1:1621037/93‑1 (MQ=255)

                                                                            tGGCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCAc             >  2:5267633/1‑93 (MQ=255)

                                                                             tgaaaTTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACg            <  1:5343043/90‑1 (MQ=255)

                                                                              gCAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGc           <  2:749527/93‑1 (MQ=255)

                                                                               cAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGcc          <  1:2964221/93‑1 (MQ=255)

                                                                               cAATTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGcc          <  1:697361/93‑1 (MQ=255)

                                                                                 aTTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAg        >  2:862029/1‑93 (MQ=255)

                                                                                 aTTTGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAg        >  1:511502/1‑93 (MQ=255)

                                                                                  tttGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAgg       >  2:941519/1‑93 (MQ=255)

                                                                                   ttGTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGc      <  2:6460590/93‑1 (MQ=255)

                                                                                     tttCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCaa    <  2:6240560/92‑1 (MQ=255)

                                                                                     gTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCaa    >  1:5217924/1‑93 (MQ=255)

                                                                                     gTTCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCaa    >  1:4754726/1‑93 (MQ=255)

                                                                                      ttCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCTCTCGGCATTACCTCCACGCCAGGCAAt   >  1:1379608/1‑93 (MQ=255)

                                                                                       tCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCAATc  >  2:6040729/1‑93 (MQ=255)

                                                                                       tCAGTGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCAATc  <  1:5657686/93‑1 (MQ=255)

TGATCCAGCAGGGATTGCGCGGCTTGTTCGGCCTTGTCTGGTTGCGGACTCCAGGGGGCCAGTTGACGTAACGCATTGGCAATTTGTTCAATGCTTGTCGCATCGACCCACATCACTTTTATTCCCAGCGAAGCCAGCTGGTCAACCTGCCGCTCGGCATTACCTCCACGCCAGGCAATC  >  NC_000913/178038‑178217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`