BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,672,562	T→C	L209P (CTG→CCG)	b1601 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,672,562	0	T	C	100.0%	751.6 / NA	234	L209P (CTG→CCG)	b1601	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/117); total (117/117)

Only 100 of 246 total aligned reads displayed.

GGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATA  >  NC_000913/1672473‑1672651

ggTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGt                                                                                        >  1:1383773/1‑93 (MQ=255)

 gTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTc                                                                                       >  1:589963/1‑93 (MQ=255)

 gTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTc                                                                                       >  2:6646597/1‑93 (MQ=255)

  ttGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCg                                                                                      <  1:4239067/93‑1 (MQ=255)

   tGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGc                                                                                     >  1:4930454/1‑93 (MQ=255)

    gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGcc                                                                                    >  2:6111376/1‑93 (MQ=255)

      aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTg                                                                                  >  1:329841/1‑93 (MQ=255)

      aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTg                                                                                  >  1:4105142/1‑93 (MQ=255)

       gggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTgg                                                                                 <  1:2434876/93‑1 (MQ=255)

         gATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGc                                                                               >  2:4657574/1‑93 (MQ=255)

         gATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGc                                                                               >  2:6710275/1‑93 (MQ=255)

          aTGGCGGCGATTCAACGTGAGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCg                                                                              >  1:6540580/1‑93 (MQ=255)

            ggcggcGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGAt                                                                            <  1:1391236/93‑1 (MQ=255)

            ggcggcGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGAt                                                                            <  1:1900475/93‑1 (MQ=255)

            ggcggcGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGAt                                                                            <  1:2631288/93‑1 (MQ=255)

              cggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGc                                                                          >  2:4754373/1‑93 (MQ=255)

              cggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGc                                                                          <  1:2384153/93‑1 (MQ=255)

              cggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGc                                                                          <  2:111450/93‑1 (MQ=255)

               ggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCt                                                                         >  1:1189899/1‑93 (MQ=255)

               ggcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCt                                                                         >  1:5292267/1‑93 (MQ=255)

                gcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTc                                                                        >  2:3147639/1‑93 (MQ=255)

                gcgATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTc                                                                        >  2:3464976/1‑93 (MQ=255)

                    ttCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgccg                                                                    >  1:5512735/1‑93 (MQ=255)

                    ttCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGACGCTcgccg                                                                    >  2:652615/1‑93 (MQ=255)

                     tCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgccgc                                                                   >  2:3994781/1‑93 (MQ=255)

                     tCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgccgc                                                                   <  1:2179076/93‑1 (MQ=255)

                       aaCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCAc                                                                 <  1:6473062/93‑1 (MQ=255)

                       aaCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCAc                                                                 >  2:730821/1‑93 (MQ=255)

                        aCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACt                                                                <  1:6042688/93‑1 (MQ=255)

                        aCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACt                                                                >  2:1473873/1‑93 (MQ=255)

                            gCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGAt                                                            <  2:4366105/93‑1 (MQ=255)

                             cGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATg                                                           <  2:3216689/93‑1 (MQ=255)

                              gATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt                                                          >  1:2786655/1‑93 (MQ=255)

                               aTTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGtt                                                         >  2:187248/1‑93 (MQ=255)

                                ttGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                                                        >  1:5621508/1‑93 (MQ=255)

                                ttGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                                                        >  1:6221403/1‑93 (MQ=255)

                                  gACAGTGTTTCTCATTATCTGGTGCTGAAAACACCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgc                                                      >  2:6548723/1‑93 (MQ=255)

                                   aCAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                                                     <  2:1159421/93‑1 (MQ=255)

                                   aCAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                                                     <  1:3838306/93‑1 (MQ=255)

                                   aCAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                                                     <  1:3088190/93‑1 (MQ=255)

                                    cAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt                                                    >  2:5844262/1‑93 (MQ=255)

                                     aGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                                                   >  2:2606660/1‑93 (MQ=255)

                                     aGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                                                   <  1:4774124/93‑1 (MQ=255)

                                      gtgtTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGAGCGATGCTCTCCGCACCCCAGGttcgcttct                                                  >  2:4041531/1‑92 (MQ=255)

                                        gtTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTtcgcttcgct                                                >  2:1842871/1‑93 (MQ=255)

                                         tttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt                                               >  1:1581203/1‑93 (MQ=255)

                                         tttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt                                               >  2:5920336/1‑93 (MQ=255)

                                           tctcATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCtttt                                             <  2:1806055/93‑1 (MQ=255)

                                              cATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTc                                          >  1:5693523/1‑93 (MQ=255)

                                               aTTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCt                                         >  2:4563780/1‑93 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                        <  1:5333002/93‑1 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                        >  1:1350937/1‑93 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                        >  2:2219215/1‑93 (MQ=255)

                                                  aTCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTggg                                      >  2:1306386/1‑93 (MQ=255)

                                                  aTCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTggg                                      <  2:5468178/93‑1 (MQ=255)

                                                   tCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgggg                                     >  1:642603/1‑93 (MQ=255)

                                                   tCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgggg                                     <  1:163611/93‑1 (MQ=255)

                                                    cTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGa                                    <  2:6192812/93‑1 (MQ=255)

                                                     tGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt                                   <  2:491166/93‑1 (MQ=255)

                                                      ggTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAtt                                  <  2:1088493/93‑1 (MQ=255)

                                                      ggTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAtt                                  <  2:311230/93‑1 (MQ=255)

                                                       gTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTg                                 >  2:227167/1‑93 (MQ=255)

                                                       gTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTg                                 >  1:3431501/1‑93 (MQ=255)

                                                        tGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGc                                <  1:4509673/93‑1 (MQ=255)

                                                         gCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCt                               <  2:832283/93‑1 (MQ=255)

                                                         gCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCt                               <  1:381793/93‑1 (MQ=255)

                                                             aaaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGcc                           <  2:4239444/93‑1 (MQ=255)

                                                              aaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATTTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCt                          <  2:5615145/93‑1 (MQ=255)

                                                              aaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCt                          <  2:2245802/93‑1 (MQ=255)

                                                              aaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCt                          >  1:3719870/1‑93 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                         >  2:2713240/1‑93 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                         >  1:4150856/1‑93 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                         <  2:3812414/93‑1 (MQ=255)

                                                                aCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCttt                        <  2:5736557/93‑1 (MQ=255)

                                                                 cAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGGTGGCCTTTg                       <  1:1488024/93‑1 (MQ=255)

                                                                  aGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgc                      <  1:2306711/93‑1 (MQ=255)

                                                                  aGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgc                      >  1:6638762/1‑93 (MQ=255)

                                                                  aGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgc                      <  1:351456/93‑1 (MQ=255)

                                                                   gCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgcg                     >  1:901036/1‑93 (MQ=255)

                                                                   gCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgcg                     >  2:4454526/1‑93 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                  >  2:504374/1‑93 (MQ=255)

                                                                       tCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTa                 >  2:1349383/1‑93 (MQ=255)

                                                                        cAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTaa                <  2:5309844/93‑1 (MQ=255)

                                                                         aGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAAt               <  1:5069968/93‑1 (MQ=255)

                                                                         aGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAAt               <  2:3062782/93‑1 (MQ=255)

                                                                           catcatCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTa             <  2:3525598/93‑1 (MQ=255)

                                                                            atcatcACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAAtttc            <  1:6619156/93‑3 (MQ=255)

                                                                             tcatcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACa           >  1:2354430/1‑93 (MQ=255)

                                                                             tcatcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACa           >  2:5208483/1‑93 (MQ=255)

                                                                             tcagcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACa           <  1:1242293/93‑1 (MQ=255)

                                                                               ctcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATc         <  2:2038714/92‑1 (MQ=255)

                                                                               atcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATc         >  1:951730/1‑93 (MQ=255)

                                                                                tcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATcc        <  1:2987508/93‑1 (MQ=255)

                                                                                tcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATcc        >  1:1724076/1‑93 (MQ=255)

                                                                                  aCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCg      <  1:5133237/93‑1 (MQ=255)

                                                                                   ccGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCACGa     >  2:2888100/1‑93 (MQ=255)

                                                                                      gCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAata  >  1:4550010/1‑93 (MQ=255)

                                                                                      gCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAata  >  1:2736251/1‑93 (MQ=255)

                                                                                      gCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAata  <  2:324753/93‑1 (MQ=255)

                                                                                      gCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAata  <  2:1435820/93‑1 (MQ=255)

GGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATA  >  NC_000913/1672473‑1672651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`