BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,684,672	A→G	intergenic (‑60/+83)	fumC ← / ← fumA	fumarase C/fumarase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,684,672	0	A	G	100.0%	705.7 / NA	214	intergenic (‑60/+83)	fumC/fumA	fumarase C/fumarase A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (108/106); total (108/106)

Only 100 of 217 total aligned reads displayed.

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         <  2:5052922/93‑1 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         <  2:3508299/93‑1 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         <  1:2067433/93‑1 (MQ=255)

 cGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCt                                                                                        >  1:5890248/1‑93 (MQ=255)

 cGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCt                                                                                        >  1:4711247/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  1:347068/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  1:1719954/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  2:5924705/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  1:5681878/1‑93 (MQ=255)

    aTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCAc                                                                                     >  1:6425764/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    >  1:1446276/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    <  1:865074/93‑1 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  <  2:2736576/93‑1 (MQ=255)

          ttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttatta                                                                               <  2:1480090/93‑1 (MQ=255)

           tCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTtattat                                                                              <  1:4527114/93‑1 (MQ=255)

           tCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTtattat                                                                              <  1:6510490/93‑1 (MQ=255)

           tCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTtattat                                                                              <  2:5354302/93‑1 (MQ=255)

            cGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTattatt                                                                             <  2:1585454/93‑1 (MQ=255)

               tGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          >  1:2277310/1‑93 (MQ=255)

                gCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAcc                                                                         <  2:1632281/93‑1 (MQ=255)

                gCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCGTTCGTTAAGCAACTTTTGGCTCACTTATTATGTAcc                                                                         <  1:5134729/93‑1 (MQ=255)

                   tACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAtt                                                                      <  2:4167896/93‑1 (MQ=255)

                     cTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTg                                                                    >  2:3164439/1‑93 (MQ=255)

                      tGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGa                                                                   >  2:2676292/1‑93 (MQ=255)

                       gTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGAt                                                                  <  2:1552832/93‑1 (MQ=255)

                        tATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATa                                                                 <  2:2915753/93‑1 (MQ=255)

                         aTTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATaa                                                                <  1:1193301/93‑1 (MQ=255)

                          ttCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAAc                                                               <  1:2863657/93‑1 (MQ=255)

                          ttCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAAc                                                               >  2:6407808/1‑93 (MQ=255)

                             aTGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaaa                                                            <  2:708806/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  1:4460450/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  1:5528398/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  1:5557327/93‑1 (MQ=255)

                               gACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATg                                                          >  2:6089736/1‑93 (MQ=255)

                               gACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATg                                                          <  2:5209424/93‑1 (MQ=255)

                                aCCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGt                                                         >  2:2966210/1‑93 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       >  2:2810069/1‑93 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       <  1:5391165/93‑1 (MQ=255)

                                   tGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTg                                                      >  1:3773847/1‑93 (MQ=255)

                                   tGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTg                                                      <  1:2356298/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   <  2:3738034/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   <  1:6489657/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   <  1:6329433/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   >  2:5846322/1‑93 (MQ=255)

                                       cctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCt                                                  <  2:454731/93‑1 (MQ=255)

                                       cctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCt                                                  <  1:1412909/93‑1 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  2:2547233/1‑93 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  2:2122491/1‑93 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  1:4850907/1‑93 (MQ=255)

                                          cACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTc                                               >  2:3009719/1‑93 (MQ=255)

                                           aCCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCg                                              <  2:4364454/93‑1 (MQ=255)

                                             cTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTg                                            >  2:2510233/1‑93 (MQ=255)

                                             cTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTg                                            >  1:3698874/1‑93 (MQ=255)

                                             cTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTg                                            <  2:5941554/93‑1 (MQ=255)

                                              tGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTCCCATTTGATAACAAATGTTTGGTCTTTCGTGc                                           <  1:3194646/93‑1 (MQ=255)

                                              tGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGc                                           >  2:4032118/1‑93 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTATTATTTGATAACAAATGGTTGGTCTTTCGTGcc                                          >  1:5955846/1‑93 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGcc                                          <  1:160732/93‑1 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGcc                                          <  1:1540813/93‑1 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGcc                                          <  1:661246/93‑1 (MQ=255)

                                                 ttAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCAt                                        <  2:1083887/93‑1 (MQ=255)

                                                  tAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATg                                       <  2:6348733/93‑1 (MQ=255)

                                                    aTTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTa                                     >  1:3396460/1‑93 (MQ=255)

                                                     ttttttCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaa                                    >  1:4379588/1‑93 (MQ=255)

                                                     ttttttCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaa                                    >  1:2765491/1‑93 (MQ=255)

                                                           ctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAc                              >  2:5822909/1‑93 (MQ=255)

                                                           ctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAc                              <  2:471939/93‑1 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             <  1:4056530/93‑1 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             >  1:830040/1‑93 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             >  1:60646/1‑93 (MQ=255)

                                                             ttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCg                            >  1:6032251/1‑93 (MQ=255)

                                                             ttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCg                            >  1:1992673/1‑93 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        >  1:2051557/1‑93 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        >  1:5800379/1‑93 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        >  1:3308626/1‑93 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        <  1:4228419/93‑1 (MQ=255)

                                                                     tGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAg                    <  2:1058568/93‑1 (MQ=255)

                                                                     tGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAg                    >  2:4964951/1‑93 (MQ=255)

                                                                       cTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAggg                  <  2:651364/93‑1 (MQ=255)

                                                                       cTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAggg                  >  1:2562382/1‑93 (MQ=255)

                                                                       cTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAggg                  <  1:6322612/93‑1 (MQ=255)

                                                                        tttCTTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 <  1:9216/93‑1 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 <  2:1749566/93‑1 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 >  2:867017/1‑93 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 >  1:2490126/1‑93 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 >  2:2290101/1‑93 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 >  2:5449978/1‑93 (MQ=255)

                                                                           cGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcggc              >  2:64792/1‑93 (MQ=255)

                                                                            gTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGct             >  1:6249552/1‑93 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            <  2:2186954/93‑1 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            <  2:3838664/93‑1 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGATTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            <  2:4322301/93‑1 (MQ=255)

                                                                                 gCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGtt        <  2:4599947/93‑1 (MQ=255)

                                                                                 gCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGtt        >  1:1088777/1‑93 (MQ=255)

                                                                                 gCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGtt        >  1:3996007/1‑93 (MQ=255)

                                                                                    aCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAt     <  2:3217745/93‑1 (MQ=255)

                                                                                    aCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAt     >  1:6125189/1‑93 (MQ=255)

                                                                                      ttttGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAttt   >  2:2439473/1‑93 (MQ=255)

                                                                                      ttttGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAttt   >  2:3542294/1‑93 (MQ=255)

                                                                                       tttGGCTCACTTATTATTTACCATTTGATAACAATTGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTc  <  2:1323342/93‑1 (MQ=255)

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`