BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,689,553	A→G	intergenic (+169/+57)	ydgA → / ← uidC	hypothetical protein/membrane‑associated protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,689,553	0	A	G	100.0%	587.7 / NA	185	intergenic (+169/+57)	ydgA/uidC	hypothetical protein/membrane‑associated protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/99); total (86/99)

Only 100 of 195 total aligned reads displayed.

CTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCAT  >  NC_000913/1689464‑1689642

cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc                                                                                        >  2:872964/1‑93 (MQ=255)

cTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAgcgc                                                                                        >  2:220096/1‑93 (MQ=255)

 ttATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGcgcg                                                                                       >  1:2866745/1‑93 (MQ=255)

   aTCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCa                                                                                     <  2:3493522/93‑1 (MQ=255)

    tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTGCGCCGCATCCGGCATAAAAAGCGCGCAc                                                                                    <  2:1948907/93‑1 (MQ=255)

    tCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGAGTTTACGCCGCATCCGGCATAAAAAGCGCGCAc                                                                                    >  2:2101132/1‑93 (MQ=255)

     cAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACt                                                                                   <  1:524416/93‑1 (MQ=255)

         ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt                                                                               >  2:15347/1‑93 (MQ=255)

         ccTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGt                                                                               >  1:6116788/1‑93 (MQ=255)

          cTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTc                                                                              <  2:2509187/93‑1 (MQ=255)

           tACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTca                                                                             >  2:6072608/1‑93 (MQ=255)

            aCCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaa                                                                            >  1:4228471/1‑93 (MQ=255)

               ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                         <  2:5782117/93‑1 (MQ=255)

               ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                         >  1:10677/1‑93 (MQ=255)

               ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                         <  2:696719/93‑1 (MQ=255)

               ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                         >  1:3625842/1‑93 (MQ=255)

               ttttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTcaacaa                                                                         <  1:346004/93‑1 (MQ=255)

                ttgccTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAAt                                                                        <  1:561878/90‑1 (MQ=255)

                 ttCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATc                                                                       <  2:4429605/93‑1 (MQ=255)

                  tCCTTCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt                                                                      <  2:4494767/93‑1 (MQ=255)

                  tCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt                                                                      <  2:6432055/93‑1 (MQ=255)

                  tCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt                                                                      <  1:2276305/93‑1 (MQ=255)

                  tCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCt                                                                      >  1:226207/1‑93 (MQ=255)

                    cTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGa                                                                    >  2:681610/1‑93 (MQ=255)

                     tGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaa                                                                   >  1:5853991/1‑93 (MQ=255)

                      gCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGaaa                                                                  <  2:4968321/93‑1 (MQ=255)

                       cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc                                                                 <  2:6117940/93‑1 (MQ=255)

                       cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc                                                                 <  1:6268780/93‑1 (MQ=255)

                       cAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGAATAAAAAGCGCGCACTTTGTCAACAATCTGAAAc                                                                 <  1:1549245/93‑1 (MQ=255)

                        aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg                                                                <  1:11840/93‑1 (MQ=255)

                        aaCACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACg                                                                >  1:950078/1‑93 (MQ=255)

                         acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATACAAAGCGCGCACTTTGTCAACAATCTGAAACGc                                                               >  2:3342350/1‑93 (MQ=255)

                         acacTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGc                                                               <  1:520215/93‑1 (MQ=255)

                          cacTTTGAAGTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGcc                                                              <  1:6577477/93‑1 (MQ=255)

                            cTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCgg                                                            <  2:5972242/93‑1 (MQ=255)

                             tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                           <  1:129371/93‑1 (MQ=255)

                             tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                           <  1:6378037/93‑1 (MQ=255)

                             tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                           >  1:4781913/1‑93 (MQ=255)

                             tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                           >  2:3545679/1‑93 (MQ=255)

                             tttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGga                                                           >  2:5367962/1‑93 (MQ=255)

                              ttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgag                                                          <  2:3151175/93‑1 (MQ=255)

                              ttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgag                                                          >  2:132717/1‑93 (MQ=255)

                              ttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgag                                                          <  2:1489315/93‑1 (MQ=255)

                              ttGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGgag                                                          >  2:1787372/1‑93 (MQ=255)

                                gAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAt                                                        <  2:639180/93‑1 (MQ=255)

                                 aaTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtt                                                       <  2:4790838/93‑1 (MQ=255)

                                 aaTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtt                                                       <  2:6465834/93‑1 (MQ=255)

                                  aTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAttt                                                      >  1:4876926/1‑93 (MQ=255)

                                  aTTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAttt                                                      <  2:6507365/93‑1 (MQ=255)

                                   tttATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGAtttt                                                     >  1:6549362/1‑93 (MQ=255)

                                     tATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtc                                                   >  2:848933/1‑93 (MQ=255)

                                      aTGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtct                                                  >  1:916755/1‑93 (MQ=255)

                                        gAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctct                                                >  1:2117437/1‑93 (MQ=255)

                                         aGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTtctctc                                               >  2:2345684/1‑93 (MQ=255)

                                          gTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGACTTTTCTCTcc                                              >  2:5182201/1‑93 (MQ=255)

                                           tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg                                             <  1:5019693/93‑1 (MQ=255)

                                           tttttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCg                                             <  2:2145304/93‑1 (MQ=255)

                                             tttGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAACGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGc                                           <  2:3835352/93‑1 (MQ=255)

                                               tGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGt                                         <  2:6648107/93‑1 (MQ=255)

                                               tGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGt                                         <  2:2661718/93‑1 (MQ=255)

                                               tGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGt                                         <  1:5354961/93‑1 (MQ=255)

                                               tGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGt                                         <  1:862637/93‑1 (MQ=255)

                                                      tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt                                  <  2:4926778/93‑1 (MQ=255)

                                                      tGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAttttt                                  <  1:4152398/93‑1 (MQ=255)

                                                       ggATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttttt                                 <  1:1039545/93‑1 (MQ=255)

                                                       ggATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttttt                                 >  2:5479933/1‑93 (MQ=255)

                                                       ggATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTAtttttt                                 >  1:5770411/1‑93 (MQ=255)

                                                        gATAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTa                                <  1:188244/93‑1 (MQ=255)

                                                         agaaGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGCCAACAATCTAAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAc                               <  1:421765/91‑1 (MQ=37)

                                                         aTAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAc                               >  1:77432/1‑93 (MQ=255)

                                                         aTAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTAc                               <  2:4239149/93‑1 (MQ=255)

                                                          tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt                              >  2:294019/1‑93 (MQ=255)

                                                          tAAGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACt                              <  1:2997034/93‑1 (MQ=255)

                                                            aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc                            >  1:2395638/1‑93 (MQ=255)

                                                            aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc                            <  2:3690130/93‑1 (MQ=255)

                                                            aGGCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTc                            >  2:3897709/1‑93 (MQ=255)

                                                             ggCGTTTACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCa                           >  2:6038048/1‑93 (MQ=255)

                                                                 tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                       <  1:2726334/93‑1 (MQ=255)

                                                                 tttACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCAt                       <  1:3124363/93‑1 (MQ=255)

                                                                   tACGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATaa                     <  1:3323656/93‑1 (MQ=255)

                                                                    aCGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATaaa                    <  1:1979336/93‑1 (MQ=255)

                                                                    aCGCCGCATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATaaa                    <  1:3914316/93‑1 (MQ=255)

                                                                       ccgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTc                 >  2:1601777/1‑93 (MQ=255)

                                                                        cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa                >  1:5743258/1‑93 (MQ=255)

                                                                        cgcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCa                <  1:4449599/93‑1 (MQ=255)

                                                                         gcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAt               >  2:2861989/1‑93 (MQ=255)

                                                                         gcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAt               <  2:2207144/93‑1 (MQ=255)

                                                                         gcATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCAt               >  1:5553558/1‑93 (MQ=255)

                                                                          cATCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATa              <  2:2258668/93‑1 (MQ=255)

                                                                           aTCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATAc             >  1:1801016/1‑93 (MQ=255)

                                                                           aTCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATAc             <  2:1748328/93‑1 (MQ=255)

                                                                           aTCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATAc             >  2:2910427/1‑93 (MQ=255)

                                                                            tCCGGCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACt            >  1:1107424/1‑93 (MQ=255)

                                                                                gCATAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAAt        <  1:610260/93‑1 (MQ=255)

                                                                                  aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc      >  2:1709086/1‑93 (MQ=255)

                                                                                  aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc      >  1:340229/1‑93 (MQ=255)

                                                                                  aTAAAAAGCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATAc      <  1:3235466/93‑1 (MQ=255)

                                                                                    aaaaagCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTc    <  2:5621943/93‑1 (MQ=255)

                                                                                     aaaagCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCa   >  1:2886039/1‑93 (MQ=255)

                                                                                      aaagCGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCAt  >  1:4033241/1‑93 (MQ=255)

CTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCAT  >  NC_000913/1689464‑1689642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`