BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,713,746	C→T	P56P (CCG→CCA)	pdxY ←	pyridoxal kinase 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,713,746	0	C	T	100.0%	733.4 / NA	205	P56P (CCG→CCA)	pdxY	pyridoxal kinase 2
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/110); total (95/110)

Only 100 of 212 total aligned reads displayed.

CGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCG  >  NC_000913/1713656‑1713835

cgATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGggtgg                                                                                         >  1:5605191/1‑93 (MQ=255)

 gATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGggtggc                                                                                        >  2:3568708/1‑93 (MQ=255)

 gATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGggtggc                                                                                        >  2:365931/1‑93 (MQ=255)

 gATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGggtggc                                                                                        >  1:3793130/1‑93 (MQ=255)

  aTCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCa                                                                                       >  1:6293833/1‑93 (MQ=255)

  aTCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCa                                                                                       <  2:3271187/93‑1 (MQ=255)

    cccAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATc                                                                                     <  1:2248852/93‑1 (MQ=255)

       aGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACg                                                                                  >  2:5446187/1‑93 (MQ=255)

        gATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGc                                                                                 >  1:5510206/1‑93 (MQ=255)

           aGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGc                                                                              >  2:3500562/1‑93 (MQ=255)

           aGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGc                                                                              >  1:241345/1‑93 (MQ=255)

            gCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGcc                                                                             >  2:3231202/1‑93 (MQ=255)

            gCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGcc                                                                             <  2:5861769/93‑1 (MQ=255)

            gCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGcc                                                                             <  1:3100284/93‑1 (MQ=255)

             ccACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCa                                                                            <  1:5275834/93‑1 (MQ=255)

              cACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAg                                                                           <  2:2511094/93‑1 (MQ=255)

               aCTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGt                                                                          <  1:5907630/93‑1 (MQ=255)

                  tAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCa                                                                       <  1:5026961/93‑1 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      >  1:4646875/1‑93 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      <  2:5297763/93‑1 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      >  2:906521/1‑93 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      <  2:5746474/93‑1 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      <  2:5958411/93‑1 (MQ=255)

                   aaTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAt                                                                      >  1:2542218/1‑93 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     <  1:3621750/93‑1 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     <  2:1270953/93‑1 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     <  2:4813572/93‑1 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     <  1:2763337/93‑1 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     <  1:6660638/93‑1 (MQ=255)

                    aTACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAtt                                                                     >  2:4194994/1‑93 (MQ=255)

                     tgcGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAttt                                                                    <  2:559745/91‑1 (MQ=255)

                     tACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCAttt                                                                    <  1:4841550/93‑1 (MQ=255)

                       cGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGc                                                                  <  2:5608190/93‑1 (MQ=255)

                        ggCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCCGTTAAATGGCTGGGTGGCATAACGCAGCCAGTCCATTTGcc                                                                 >  1:4310867/1‑93 (MQ=255)

                         gCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCg                                                                >  1:5716073/1‑93 (MQ=255)

                           aTCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTa                                                              >  2:4514484/1‑93 (MQ=255)

                           aTCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTa                                                              <  1:2635407/93‑1 (MQ=255)

                            tCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTAt                                                             <  1:5813398/93‑1 (MQ=255)

                             cacaGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCCCAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTAtt                                                            >  1:1970397/1‑93 (MQ=255)

                              acaGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTg                                                           <  2:2841305/93‑1 (MQ=255)

                                aGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTggg                                                         <  1:1364193/93‑1 (MQ=255)

                                aGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTggg                                                         >  2:858142/1‑93 (MQ=255)

                                 ggTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTTCCGTATTGGgt                                                        >  2:3001728/1‑93 (MQ=255)

                                 ggTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgt                                                        >  1:3444270/1‑93 (MQ=255)

                                 ggTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgt                                                        >  2:2111788/1‑93 (MQ=255)

                                  gtgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtg                                                       >  1:6054312/1‑93 (MQ=255)

                                  gtgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtg                                                       >  1:1561311/1‑93 (MQ=255)

                                   tgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt                                                      >  1:6473807/1‑93 (MQ=255)

                                   tgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt                                                      <  1:327293/93‑1 (MQ=255)

                                   tgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt                                                      <  2:6263589/93‑1 (MQ=255)

                                   tgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt                                                      >  2:2396858/1‑93 (MQ=255)

                                   tgtgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGgtgt                                                      <  1:183733/93‑1 (MQ=255)

                                     tgtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGa                                                    <  2:6237572/93‑1 (MQ=255)

                                      gtAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGAt                                                   <  1:442565/93‑1 (MQ=255)

                                        aaTTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTa                                                 >  2:2427347/1‑93 (MQ=255)

                                           ttATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGaa                                              <  1:5202724/93‑1 (MQ=255)

                                            tATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGaaa                                             <  2:6440316/93‑1 (MQ=255)

                                             aTCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGaaaa                                            <  1:1006164/93‑1 (MQ=255)

                                              tCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAAt                                           <  2:1205047/93‑1 (MQ=255)

                                               cAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCCTTTGCCGTATTGGGTGTGATTAGAAAAtt                                          >  2:1831156/1‑93 (MQ=255)

                                               cAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAAtt                                          >  2:1891663/1‑93 (MQ=255)

                                                 aTGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGa                                        >  1:1202929/1‑93 (MQ=255)

                                                 aTGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGa                                        >  1:841771/1‑93 (MQ=255)

                                                 aTGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGa                                        >  2:1653033/1‑93 (MQ=255)

                                                  tGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGaa                                       <  2:3429107/93‑1 (MQ=255)

                                                      ggcAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgt                                   <  2:2707418/93‑1 (MQ=255)

                                                        cAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgtgt                                 <  2:2600962/93‑1 (MQ=255)

                                                        cAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgtgt                                 <  1:2878966/93‑1 (MQ=255)

                                                        cAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgtgt                                 <  2:6187509/93‑1 (MQ=255)

                                                        cAATGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgtgt                                 <  2:5721877/93‑1 (MQ=255)

                                                         aaTGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGtt                                >  2:3051895/1‑93 (MQ=255)

                                                         aaTGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGtt                                <  1:2065245/93‑1 (MQ=255)

                                                          aTGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTc                               >  2:4422650/1‑93 (MQ=255)

                                                           tGCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCa                              <  2:484079/93‑1 (MQ=255)

                                                           tGCCTTGCACAATTTCGGTTAAATGGCGGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCa                              <  2:2896682/93‑1 (MQ=255)

                                                            gCCTTGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAg                             >  1:4773485/1‑93 (MQ=255)

                                                               ttGCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCgg                          <  1:4251886/93‑1 (MQ=255)

                                                                 gCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGcc                        <  2:1198862/93‑1 (MQ=255)

                                                                 gCACAATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGcc                        >  2:1756350/1‑93 (MQ=255)

                                                                  cacaATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCa                       >  1:2998064/1‑93 (MQ=255)

                                                                  cacaATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCa                       >  2:3598702/1‑93 (MQ=255)

                                                                  cacaATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCa                       <  1:2486294/93‑1 (MQ=255)

                                                                    caATTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGa                     <  2:755198/93‑1 (MQ=255)

                                                                     aaTTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGAc                    >  2:3848883/1‑93 (MQ=255)

                                                                      aTTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACg                   >  2:4002498/1‑93 (MQ=255)

                                                                      aTTTCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACg                   >  2:4613803/1‑93 (MQ=255)

                                                                       tttCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGt                  <  1:3521645/93‑1 (MQ=255)

                                                                         tCGGTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTc                <  1:1301516/93‑1 (MQ=255)

                                                                           ggTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTcgc              >  1:6092368/1‑93 (MQ=255)

                                                                           ggTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTcgc              <  2:5035534/93‑1 (MQ=255)

                                                                            gTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTcgcg             >  1:5132433/1‑93 (MQ=255)

                                                                            gTTAAATGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTcgcg             >  2:2164059/1‑93 (MQ=255)

                                                                               aaaTGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGccc          <  2:1509167/93‑1 (MQ=255)

                                                                               aaaTGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGccc          <  2:5161167/93‑1 (MQ=255)

                                                                                aaTGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCa         >  1:4491607/1‑93 (MQ=255)

                                                                                aaTGGCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCa         <  2:3108701/93‑1 (MQ=255)

                                                                                   ggCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAggc      >  2:732666/1‑93 (MQ=255)

                                                                                    gCTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAggcg     <  1:1422113/93‑1 (MQ=255)

                                                                                     cTGGGTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAggcgg    <  2:220856/93‑1 (MQ=255)

                                                                                       gggTGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGgcggcg  >  2:456991/1‑93 (MQ=255)

CGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCG  >  NC_000913/1713656‑1713835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`