BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,731,175	T→C	R1355R (CGT→CGC)	lhr →	Lhr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,731,175	0	T	C	100.0%	713.3 / NA	219	R1355R (CGT→CGC)	lhr	Lhr
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/119); total (100/119)

Only 100 of 227 total aligned reads displayed.

GTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGTCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCG  >  NC_000913/1731085‑1731264

gTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCa                                                                                         <  2:5850990/93‑1 (MQ=255)

gTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCa                                                                                         >  2:5044338/1‑93 (MQ=255)

 tCGTTATTGCAGTTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAg                                                                                        <  2:4836599/93‑1 (MQ=255)

   gTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGc                                                                                      <  2:5741706/93‑1 (MQ=255)

       ttGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTg                                                                                  >  2:5623755/1‑93 (MQ=255)

        tGCAGGTGGAGCCACTAAGCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGa                                                                                 <  1:2704922/93‑1 (MQ=255)

        tGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGa                                                                                 <  1:5639237/93‑1 (MQ=255)

        tGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGa                                                                                 <  2:4342789/93‑1 (MQ=255)

         gCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGAt                                                                                <  2:2288108/93‑1 (MQ=255)

         gCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGAt                                                                                <  2:1770605/93‑1 (MQ=255)

          cAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATa                                                                               <  1:4514658/93‑1 (MQ=255)

          cAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATa                                                                               <  1:6463357/93‑1 (MQ=255)

           aGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAg                                                                              >  1:5898964/1‑93 (MQ=255)

           aGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAg                                                                              >  2:3968297/1‑93 (MQ=255)

               agAGCTACTAGACGATACCGAAAGGATGCGGGCGCTGTTGGAAAATATGCTCGACCGCTACGGCATCATCATGCGCCAGGCGGTGATAGCCGa                                                                          <  1:3693584/92‑1 (MQ=255)

                gAGCCACTAAACGAAACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGaa                                                                         <  1:1932486/93‑1 (MQ=255)

                  gCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGaaaa                                                                       <  1:5557920/93‑1 (MQ=255)

                  gCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGaaaa                                                                       <  1:6177548/93‑1 (MQ=255)

                   ccACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAat                                                                      <  2:1523404/93‑1 (MQ=255)

                    cACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAata                                                                     >  2:4565207/1‑93 (MQ=255)

                    cACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAata                                                                     >  2:4772624/1‑93 (MQ=255)

                    cACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAata                                                                     >  2:5699447/1‑93 (MQ=255)

                    cACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAata                                                                     >  2:371936/1‑93 (MQ=255)

                     aCTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAatat                                                                    >  2:2001797/1‑93 (MQ=255)

                      cTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATc                                                                   >  1:1897150/1‑93 (MQ=255)

                        aaaCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATccc                                                                 <  2:3017448/93‑1 (MQ=255)

                         aaCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCt                                                                <  2:2799442/93‑1 (MQ=255)

                         aaCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCt                                                                <  1:4981643/93‑1 (MQ=255)

                          aCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTg                                                               >  2:6167352/1‑93 (MQ=255)

                          aCGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTg                                                               <  1:2161396/93‑1 (MQ=255)

                           cGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTgg                                                              <  1:165951/93‑1 (MQ=255)

                           cGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTgg                                                              <  2:4877346/93‑1 (MQ=255)

                           cGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTgg                                                              <  2:2574508/93‑1 (MQ=255)

                            gATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGc                                                             <  1:4424676/93‑1 (MQ=255)

                             aTACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCg                                                            <  2:4664062/93‑1 (MQ=255)

                               aCCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCggg                                                          <  1:6209723/93‑1 (MQ=255)

                               aCCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCggg                                                          <  2:2246282/93‑1 (MQ=255)

                                ccGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGt                                                         <  2:5091475/93‑1 (MQ=255)

                                ccGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGt                                                         <  1:1812013/93‑1 (MQ=255)

                                ccGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGt                                                         <  1:6681812/93‑1 (MQ=255)

                                 cGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGtt                                                        <  1:3650820/93‑1 (MQ=255)

                                  gAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGttt                                                       >  1:5125048/1‑93 (MQ=255)

                                  gAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGttt                                                       >  2:3875492/1‑93 (MQ=255)

                                   aaaGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGGTTc                                                      >  1:1162381/1‑93 (MQ=255)

                                    aaGGATGCTGGCGCTGTCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTcc                                                     <  1:6715127/93‑1 (MQ=255)

                                    aaGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTcc                                                     >  1:4164418/1‑93 (MQ=255)

                                    aaGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTcc                                                     >  1:3557580/1‑93 (MQ=255)

                                     aGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCa                                                    >  1:3116195/1‑93 (MQ=255)

                                      ggATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCAt                                                   >  1:2103572/1‑93 (MQ=255)

                                      ggATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCAt                                                   >  1:423023/1‑93 (MQ=255)

                                       gATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATc                                                  >  2:834113/1‑93 (MQ=255)

                                            tggcgctggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGCTTCCATCGATGc                                             >  1:1526294/1‑93 (MQ=255)

                                              gcgctggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCaa                                           <  2:6055079/93‑1 (MQ=255)

                                                  tggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGc                                       <  2:110190/93‑1 (MQ=255)

                                                  tggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGc                                       <  2:3500822/93‑1 (MQ=255)

                                                   ggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCt                                      <  1:893524/93‑1 (MQ=255)

                                                   ggcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCt                                      >  1:1905752/1‑93 (MQ=255)

                                                    gcgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCtt                                     <  2:4120786/93‑1 (MQ=255)

                                                     cgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCttt                                    <  2:749416/93‑1 (MQ=255)

                                                     cgGAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCttt                                    >  2:6359620/1‑93 (MQ=255)

                                                      ggAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCtttt                                   >  1:4714709/1‑92 (MQ=255)

                                                      ggAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTg                                   >  2:318407/1‑93 (MQ=255)

                                                       gAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGt                                  <  2:1615088/93‑1 (MQ=255)

                                                       gAAAATATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGt                                  <  2:4374099/93‑1 (MQ=255)

                                                        aaaaTATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTc                                 >  1:1433190/1‑93 (MQ=255)

                                                        aaaaTATGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCAATCGATGCAAACGCTTTGtg                                 >  2:367604/1‑92 (MQ=255)

                                                              tGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTa                           >  1:2858170/1‑93 (MQ=255)

                                                              tGCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTa                           >  2:6706151/1‑93 (MQ=255)

                                                               gCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTAt                          >  1:2334308/1‑93 (MQ=255)

                                                               gCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTAt                          >  2:2450504/1‑93 (MQ=255)

                                                               gCTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTAt                          <  2:3612433/93‑1 (MQ=255)

                                                                cTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATg                         <  1:2574432/93‑1 (MQ=255)

                                                                cTCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATg                         >  1:2114465/1‑93 (MQ=255)

                                                                 tCGACCGCTACGTCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATgg                        <  1:3065702/93‑1 (MQ=255)

                                                                 tCGACCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGCAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATgg                        >  2:3569872/1‑93 (MQ=255)

                                                                    aCCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAg                     <  1:3884911/93‑1 (MQ=255)

                                                                    aCCGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAg                     <  1:5210936/93‑1 (MQ=255)

                                                                     ccGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGa                    <  2:1218640/93‑1 (MQ=255)

                                                                      cgcgACGGCAGCATCAGGCGCCAGGCCGTGATAGCCGAAAATATCCCTGGCGGGTTGCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGAc                   <  1:2496906/93‑1 (MQ=255)

                                                                      cGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGAc                   >  1:3305321/1‑93 (MQ=255)

                                                                      cGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGAc                   <  2:5596533/93‑1 (MQ=255)

                                                                      cGCTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGAATGAAAGaa                   >  1:5466452/1‑92 (MQ=255)

                                                                        cTACGGCATCATCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTc                 <  2:4528484/93‑1 (MQ=255)

                                                                              catgatCAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCg           <  1:6497564/93‑1 (MQ=255)

                                                                               atcatcAGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGa          >  1:874538/1‑93 (MQ=255)

                                                                                tcatcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGaa         >  2:3922177/1‑93 (MQ=255)

                                                                                tcatcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGaa         >  1:5353742/1‑93 (MQ=255)

                                                                                tcatcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGaa         >  2:3301781/1‑93 (MQ=255)

                                                                                  atcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGGTTCCATCGATGCAAACGCTTTGTCGAAGTATGGCAGACTCCGGGCGAAtt       >  1:2813598/1‑93 (MQ=255)

                                                                                   tcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCTGGTTTCCATCGATGAAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTa      <  1:2763974/93‑1 (MQ=255)

                                                                                   tcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTa      >  1:3932109/1‑93 (MQ=255)

                                                                                   tcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTa      <  2:1807080/93‑1 (MQ=255)

                                                                                   tcaGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTa      >  1:1032090/1‑93 (MQ=255)

                                                                                    caGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTAt     <  2:5341183/93‑1 (MQ=255)

                                                                                     aGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATg    >  2:3080888/1‑93 (MQ=255)

                                                                                     aGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATg    <  2:1945938/93‑1 (MQ=255)

                                                                                     aGTCGCCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATg    <  1:3227531/93‑1 (MQ=255)

                                                                                       tcgccAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGct  >  2:2157033/1‑92 (MQ=255)

                                                                                       tcgccAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCg  <  2:1705129/93‑1 (MQ=255)

                                                                                       tcgccAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCg  <  2:4137137/93‑1 (MQ=255)

GTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGTCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCG  >  NC_000913/1731085‑1731264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`