BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	196,710	C→T	L55L (CTC→CTT)	yaeL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	196,710	0	C	T	100.0%	795.1 / NA	214	L55L (CTC→CTT)	yaeL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/119); total (95/119)

Only 100 of 214 total aligned reads displayed.

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196620‑196799

tCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTgg                                                                                         >  2:5042229/1‑93 (MQ=255)

tCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTgg                                                                                         >  1:6212335/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  2:79963/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       <  1:3344039/93‑1 (MQ=255)

        gggTTGCCCGGCGGTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGCat                                                                                 >  1:4038126/1‑93 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  2:2548730/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  1:1629416/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  2:1341665/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  1:3631000/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  1:210622/93‑1 (MQ=255)

          gTTGCCCTGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                               <  1:6497024/93‑1 (MQ=255)

          gTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                               >  1:1118176/1‑93 (MQ=255)

          gTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                               <  2:6296719/93‑1 (MQ=255)

          gTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAatat                                                                               >  2:4419329/1‑93 (MQ=255)

             gCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGtt                                                                            >  2:6057945/1‑93 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           <  1:1970353/93‑1 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           >  2:5746921/1‑93 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           >  2:5324917/1‑93 (MQ=255)

               ccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATACGCTTGGCACCGCATATGTTAt                                                                          >  1:4918297/1‑93 (MQ=255)

                    gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGTGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTAATCGccc                                                                     <  1:6364662/93‑1 (MQ=255)

                    gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                     <  1:2209779/93‑1 (MQ=255)

                    gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                     <  2:3794399/93‑1 (MQ=255)

                    gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                     <  1:3771729/93‑1 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    <  1:5679423/93‑1 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    >  2:3748713/1‑93 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    <  1:5930589/93‑1 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    >  2:4813939/1‑93 (MQ=255)

                      tgtgGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTg                                                                   <  2:1944287/93‑1 (MQ=255)

                        tggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGAt                                                                 <  1:5781285/93‑1 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                               <  1:4647407/93‑1 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                               <  1:821605/93‑1 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                             >  2:1795666/1‑93 (MQ=255)

                              tCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCCAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGtt                                                           <  1:6387723/93‑1 (MQ=255)

                               cgcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCAAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTg                                                          >  2:3068687/1‑93 (MQ=255)

                                gcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgg                                                         <  2:455372/93‑1 (MQ=255)

                                 cgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTggg                                                        >  2:208637/1‑93 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       <  1:4344287/93‑1 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       >  1:6586352/1‑93 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       >  1:4005037/1‑93 (MQ=255)

                                  gTTGAGCGTTGCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       <  1:2597904/93‑1 (MQ=255)

                                    tGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCgg                                                     >  1:4867362/1‑93 (MQ=255)

                                    tGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCgg                                                     >  2:6095065/1‑93 (MQ=255)

                                    tGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCgg                                                     >  1:3138079/1‑93 (MQ=255)

                                     taGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGt                                                    <  2:1645080/92‑1 (MQ=255)

                                     gAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGt                                                    >  1:4209666/1‑93 (MQ=255)

                                     gAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGt                                                    <  2:4391883/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  >  1:1475544/1‑93 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  >  1:1904341/1‑93 (MQ=255)

                                            tctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCa                                             <  2:3326976/93‑1 (MQ=255)

                                             ctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaa                                            <  1:977242/93‑1 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaa                                           >  1:519577/1‑93 (MQ=255)

                                               cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                          >  1:6088361/1‑93 (MQ=255)

                                                aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                         >  2:4674148/1‑93 (MQ=255)

                                                 aTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATg                                        >  1:899548/1‑93 (MQ=255)

                                                  tAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGc                                       <  2:3461858/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  1:3238935/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  2:4077567/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     >  1:4465669/1‑93 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  1:6716307/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     >  1:253172/1‑93 (MQ=255)

                                                     ggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTgg                                    <  1:4982716/93‑1 (MQ=255)

                                                     ggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTgg                                    <  2:3986885/93‑1 (MQ=255)

                                                      gTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGa                                   <  2:5587336/93‑1 (MQ=255)

                                                        ttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATg                                 <  1:1206142/93‑1 (MQ=255)

                                                         tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  1:572572/93‑1 (MQ=255)

                                                         tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  2:1714177/93‑1 (MQ=255)

                                                          ggTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                               >  2:1187341/1‑93 (MQ=255)

                                                           gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                              <  2:4964442/93‑1 (MQ=255)

                                                            tAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                             <  2:3705973/93‑1 (MQ=255)

                                                            tAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                             <  1:1669394/93‑1 (MQ=255)

                                                             aaGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                            >  1:6151160/1‑93 (MQ=255)

                                                             aaGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                            <  1:5067153/93‑1 (MQ=255)

                                                              aGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcg                           >  2:5232715/1‑93 (MQ=255)

                                                              aGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcg                           >  2:5902537/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          >  1:3695795/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          >  1:4382218/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          <  2:6628001/93‑1 (MQ=255)

                                                                  tctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGa                       <  2:29023/92‑1 (MQ=255)

                                                                  gcTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGa                       <  1:275477/93‑1 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCACGCAGaa                      <  2:4620207/93‑1 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                     <  1:3452617/93‑1 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                     <  1:3019488/93‑1 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                     >  1:1532850/1‑93 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                   >  2:4275633/1‑93 (MQ=255)

                                                                        gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                 <  1:5920903/93‑1 (MQ=255)

                                                                          ggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCCAAATGCTGGATGAGCGCGCAGAACCGGTCg               >  2:312177/1‑93 (MQ=255)

                                                                          ggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCg               >  1:5710409/1‑93 (MQ=255)

                                                                          ggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCg               <  2:717251/93‑1 (MQ=255)

                                                                            cgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGtt             <  1:5793201/93‑1 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           <  2:3161547/93‑1 (MQ=255)

                                                                               aCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCg          >  1:1788663/1‑93 (MQ=255)

                                                                               aCTGATAAGCTTGGCACCGAATATGGTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCg          >  2:1702749/1‑93 (MQ=255)

                                                                                cTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCgg         >  1:2842459/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  1:5756324/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       <  2:6025056/93‑1 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       <  2:4134050/93‑1 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  2:1794368/1‑93 (MQ=255)

                                                                                     aaGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTc    <  1:240908/93‑1 (MQ=255)

                                                                                     aaGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTc    >  2:2482656/1‑93 (MQ=255)

                                                                                       gCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCg  >  1:1699641/1‑93 (MQ=255)

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196620‑196799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`