BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,768,647	T→C	A12A (GCT→GCC)	b1689 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,768,647	0	T	C	100.0%	709.6 / NA	214	A12A (GCT→GCC)	b1689	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (128/86); total (128/86)

Only 100 of 215 total aligned reads displayed.

GATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCTTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTG  >  NC_000913/1768557‑1768736

gATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTa                                                                                         >  2:5694045/1‑93 (MQ=255)

gATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTa                                                                                         >  1:4988428/1‑93 (MQ=255)

  tACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATg                                                                                       >  1:2720929/1‑93 (MQ=255)

   aCTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGa                                                                                      >  1:2819627/1‑93 (MQ=255)

    cTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGaa                                                                                     >  1:4178322/1‑93 (MQ=255)

     tgtgACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAAc                                                                                    <  2:1307192/93‑1 (MQ=255)

     tgtgACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAAc                                                                                    <  2:4160086/93‑1 (MQ=255)

     tgtgACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAAc                                                                                    >  1:1999361/1‑93 (MQ=255)

         aCTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCa                                                                                >  1:2045489/1‑93 (MQ=255)

         aCTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCa                                                                                <  2:3394713/93‑1 (MQ=255)

         aCTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCa                                                                                <  2:1603352/93‑1 (MQ=255)

           tctctTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAgg                                                                              <  2:657577/93‑1 (MQ=255)

              ctTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCAc                                                                           <  1:5323071/93‑1 (MQ=255)

              ctTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCAc                                                                           <  1:5885059/93‑1 (MQ=255)

               ttCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACt                                                                          >  1:830042/1‑93 (MQ=255)

                tCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTc                                                                         >  1:4350297/1‑93 (MQ=255)

                tCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTc                                                                         <  2:2373502/93‑1 (MQ=255)

                 cAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTcc                                                                        >  2:5926922/1‑93 (MQ=255)

                 cAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTcc                                                                        <  1:3619973/93‑1 (MQ=255)

                    gCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGcc                                                                     <  2:6038235/93‑1 (MQ=255)

                     ccGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCa                                                                    >  1:6112272/1‑93 (MQ=255)

                       gTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCata                                                                  >  1:5445426/1‑93 (MQ=255)

                       gTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCata                                                                  <  2:6110108/93‑1 (MQ=255)

                        tCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCatat                                                                 >  1:3267453/1‑93 (MQ=255)

                          agcagGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATAttt                                                               >  1:4727318/1‑93 (MQ=255)

                          agcagGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATAttt                                                               >  2:1911578/1‑93 (MQ=255)

                          agcagGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATAttt                                                               >  1:2370765/1‑93 (MQ=255)

                          agcagGCTGATAATGTTATTTATATTTTATTGTTTATTGCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACGCCGCCATAttt                                                               <  1:6419676/93‑1 (MQ=255)

                            cagGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATAttttt                                                             <  1:6017383/93‑1 (MQ=255)

                            cagGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATAttttt                                                             <  1:954450/93‑1 (MQ=255)

                             agGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTg                                                            >  1:5651154/1‑93 (MQ=255)

                              ggCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGc                                                           >  1:1346181/1‑93 (MQ=255)

                              ggCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGc                                                           >  2:342529/1‑93 (MQ=255)

                               gCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGcc                                                          <  1:4696051/93‑1 (MQ=255)

                               gCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGcc                                                          <  2:1728165/93‑1 (MQ=255)

                               gCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGcc                                                          >  2:676680/1‑93 (MQ=255)

                                 tGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCAt                                                        >  1:3831306/1‑93 (MQ=255)

                                   aTAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGa                                                      <  1:1763135/93‑1 (MQ=255)

                                    tAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGAc                                                     >  1:4055155/1‑93 (MQ=255)

                                    tAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGAc                                                     <  1:5962604/93‑1 (MQ=255)

                                      aTGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTa                                                   >  1:2167314/1‑93 (MQ=255)

                                       tGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTAt                                                  >  2:6019079/1‑93 (MQ=255)

                                       tGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTAt                                                  >  1:6288331/1‑93 (MQ=255)

                                        gTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTAtt                                                 <  1:151257/93‑1 (MQ=255)

                                        gTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTAtt                                                 <  2:2151001/93‑1 (MQ=255)

                                         ttatttatATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCCGGCACTCCGCCATATTTTTGCCATTACTATtg                                                >  2:1395974/1‑93 (MQ=255)

                                         ttatttatATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATtg                                                >  2:2812459/1‑93 (MQ=255)

                                         ttatttatATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATtg                                                >  2:3686199/1‑93 (MQ=255)

                                          tatttatATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATtga                                               >  1:5193687/1‑93 (MQ=255)

                                              tataTTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGaa                                           >  2:1144459/1‑93 (MQ=255)

                                               atatTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAAt                                          >  2:6064802/1‑93 (MQ=255)

                                                tatTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATg                                         >  1:4005743/1‑93 (MQ=255)

                                                tatTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATg                                         <  2:1500368/93‑1 (MQ=255)

                                                tatTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATg                                         >  1:3496546/1‑93 (MQ=255)

                                                 atTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATgc                                        >  2:2014828/1‑93 (MQ=255)

                                                   tttATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATgcgc                                      >  2:5820511/1‑93 (MQ=255)

                                                     tATTGTTTATTTCATGCAGCCATTACACGATGAACGCCTTTGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGa                                    >  1:5020330/1‑93 (MQ=255)

                                                      aTTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGAc                                   >  1:1294973/1‑93 (MQ=255)

                                                      aTTGTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGAc                                   >  1:3938257/1‑93 (MQ=255)

                                                         gTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTg                                >  2:2253324/1‑93 (MQ=255)

                                                         gTTTATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTg                                >  1:4902563/1‑93 (MQ=255)

                                                          tttATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTgg                               >  2:6361028/1‑93 (MQ=255)

                                                            tATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGAt                             <  1:6672959/93‑1 (MQ=255)

                                                            tATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGAt                             >  2:6473006/1‑93 (MQ=255)

                                                            tATTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGAt                             <  2:4504819/93‑1 (MQ=255)

                                                             aTTTCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGAtt                            >  2:557901/1‑93 (MQ=255)

                                                              tttCATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTg                           >  2:3754687/1‑93 (MQ=255)

                                                                 taTGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGccc                        <  1:1877545/92‑1 (MQ=255)

                                                                 cATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGccc                        >  1:1058175/1‑93 (MQ=255)

                                                                 cATGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGccc                        <  2:2494831/93‑1 (MQ=255)

                                                                  aTGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCa                       >  2:260958/1‑93 (MQ=255)

                                                                   tGCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAg                      <  1:162377/93‑1 (MQ=255)

                                                                    gCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGa                     <  1:3903356/93‑1 (MQ=255)

                                                                    gCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGa                     >  2:3873014/1‑93 (MQ=255)

                                                                    gCAGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGa                     <  2:3293861/93‑1 (MQ=255)

                                                                      aGCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGAcc                   >  1:6556786/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  2:1573646/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  1:867285/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  2:4849268/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  1:2182230/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  1:3048468/1‑93 (MQ=255)

                                                                       gCCATTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCg                  >  1:5535144/1‑93 (MQ=255)

                                                                          aTTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTg               >  2:4345616/1‑93 (MQ=255)

                                                                          aTTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTg               >  2:4646201/1‑93 (MQ=255)

                                                                          aTTACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTg               >  2:5288095/1‑93 (MQ=255)

                                                                           ttACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGa              >  1:1388365/1‑93 (MQ=255)

                                                                           ttACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGa              >  2:6397346/1‑93 (MQ=255)

                                                                            tACACGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGAc             <  1:459389/93‑1 (MQ=255)

                                                                              cacGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAg           >  1:6259071/1‑93 (MQ=255)

                                                                               acGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGt          >  2:1460310/1‑93 (MQ=255)

                                                                               acGATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGt          >  1:3371488/1‑93 (MQ=255)

                                                                                 gATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGa        >  2:764693/1‑93 (MQ=255)

                                                                                 gATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGa        >  1:5801597/1‑93 (MQ=255)

                                                                                 gATGAACGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGa        >  2:4230289/1‑93 (MQ=255)

                                                                                     aaCGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGc    <  1:380754/93‑1 (MQ=255)

                                                                                     aaCGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGc    >  2:4538692/1‑93 (MQ=255)

                                                                                      aCGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCt   >  1:5733321/1‑93 (MQ=255)

                                                                                      aCGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCt   >  1:2586361/1‑93 (MQ=255)

                                                                                      aCGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCt   >  2:5187950/1‑93 (MQ=255)

                                                                                       cGCCTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTg  <  1:1585234/93‑1 (MQ=255)

GATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGATAATGTTATTTATATTTTATTGTTTATTTCATGCAGCCATTACACGATGAACGCTTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTG  >  NC_000913/1768557‑1768736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`