BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,778,478	T→C	A18A (GCT→GCC)	ydiR →	putative flavoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,778,478	0	T	C	100.0%	866.9 / NA	262	A18A (GCT→GCC)	ydiR	putative flavoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/135); total (127/135)

Only 100 of 265 total aligned reads displayed.

AGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGG  >  NC_000913/1778389‑1778567

agaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACTATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGaa                                                                                        <  2:850800/93‑1 (MQ=255)

agaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGaa                                                                                        >  1:2303386/1‑93 (MQ=255)

agaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGaa                                                                                        <  1:1557107/93‑1 (MQ=255)

agaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGaa                                                                                        >  2:4824328/1‑93 (MQ=255)

 gaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAAc                                                                                       >  2:6224478/1‑93 (MQ=255)

   aaGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTg                                                                                     >  2:5145059/1‑93 (MQ=255)

      cccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGttt                                                                                  >  2:4810328/1‑93 (MQ=255)

      cccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGttt                                                                                  <  1:3460586/93‑1 (MQ=255)

       ccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTg                                                                                 >  2:4061151/1‑93 (MQ=255)

        ctgaactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAATAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTgg                                                                                >  2:4692006/1‑93 (MQ=255)

         tgaactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggc                                                                               <  2:5219088/93‑1 (MQ=255)

          gaactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcg                                                                              <  1:323812/93‑1 (MQ=255)

           aactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcgg                                                                             <  1:2501158/93‑1 (MQ=255)

           aactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcgg                                                                             <  1:4396492/93‑1 (MQ=255)

           aactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcgg                                                                             <  2:6673049/93‑1 (MQ=255)

            actgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcggc                                                                            >  1:1939033/1‑93 (MQ=255)

            actgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggcggc                                                                            <  2:4989893/93‑1 (MQ=255)

               gaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCt                                                                         >  2:5346063/1‑93 (MQ=255)

               gaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCt                                                                         <  2:3712770/93‑1 (MQ=255)

                aaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTc                                                                        >  2:5795373/1‑93 (MQ=255)

                aaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTc                                                                        >  2:546253/1‑93 (MQ=255)

                aaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTc                                                                        >  2:6542842/1‑93 (MQ=255)

                 aGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCa                                                                       >  2:5757112/1‑93 (MQ=255)

                 aGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCa                                                                       >  1:1085541/1‑93 (MQ=255)

                   ccTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGc                                                                     >  2:4306353/1‑93 (MQ=255)

                    cTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCa                                                                    >  2:210722/1‑93 (MQ=255)

                      aCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAAt                                                                  >  2:6398719/1‑93 (MQ=255)

                      aCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAAt                                                                  >  1:2056427/1‑93 (MQ=255)

                      aCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAAt                                                                  >  1:2667021/1‑93 (MQ=255)

                       cGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATg                                                                 <  2:4294327/93‑1 (MQ=255)

                       cGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATg                                                                 <  1:6280482/93‑1 (MQ=255)

                        ggAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATgg                                                                <  2:4899004/93‑1 (MQ=255)

                          agaagaAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATgggg                                                              >  1:4753701/1‑93 (MQ=255)

                             agaaACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCa                                                           >  2:3906234/1‑93 (MQ=255)

                              gaaACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCaa                                                          >  1:6598450/1‑93 (MQ=255)

                              gaaACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCaa                                                          <  1:4344342/93‑1 (MQ=255)

                                aaCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACa                                                        >  2:1809472/1‑93 (MQ=255)

                                aaCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACa                                                        >  1:3654539/1‑93 (MQ=255)

                                 aCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAg                                                       <  1:5724959/93‑1 (MQ=255)

                                 aCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAg                                                       >  1:3348365/1‑93 (MQ=255)

                                 aCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAg                                                       >  2:5930210/1‑93 (MQ=255)

                                  cGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAgg                                                      >  1:5179184/1‑93 (MQ=255)

                                    aTGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtg                                                    >  1:5664647/1‑93 (MQ=255)

                                     tGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtgt                                                   <  2:1343604/93‑1 (MQ=255)

                                     tGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtgt                                                   <  2:3025005/93‑1 (MQ=255)

                                      gAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTa                                                  <  1:317419/93‑1 (MQ=255)

                                          cAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGcc                                              <  2:3115830/93‑1 (MQ=255)

                                           aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             >  2:3320408/1‑93 (MQ=255)

                                             ttAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAtt                                           >  1:2017447/1‑93 (MQ=255)

                                               aaaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGt                                         >  2:2684360/1‑93 (MQ=255)

                                               aaaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGGGTATGCCATTGt                                         >  1:1374414/1‑93 (MQ=255)

                                                aaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTa                                        <  2:1857931/93‑1 (MQ=255)

                                                aaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTa                                        >  1:1176382/1‑93 (MQ=255)

                                                aaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTa                                        >  1:3115925/1‑93 (MQ=255)

                                                  cAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGTCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACa                                      <  2:3575626/93‑1 (MQ=255)

                                                   aGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACaa                                     <  1:2792658/93‑1 (MQ=255)

                                                   aGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACaa                                     >  1:1242501/1‑93 (MQ=255)

                                                    gCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACaaa                                    >  1:176028/1‑93 (MQ=255)

                                                      gTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAAt                                  >  2:4575893/1‑93 (MQ=255)

                                                      gTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAAt                                  <  1:870547/93‑1 (MQ=255)

                                                       tCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATa                                 <  1:4050225/93‑1 (MQ=255)

                                                        cTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAc                                <  2:124180/93‑1 (MQ=255)

                                                        cTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAc                                <  2:2930750/93‑1 (MQ=255)

                                                         tGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc                               >  1:2156870/1‑93 (MQ=255)

                                                         tGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc                               >  1:5481036/1‑93 (MQ=255)

                                                          gggTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCg                              <  1:1673264/93‑1 (MQ=255)

                                                           ggTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGa                             >  1:3903534/1‑93 (MQ=255)

                                                            gTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGAc                            <  1:6498295/93‑1 (MQ=255)

                                                                ttAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAgg                        >  1:6700373/1‑93 (MQ=255)

                                                                  aGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcg                      <  2:721250/93‑1 (MQ=255)

                                                                   gCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcgc                     <  2:95119/93‑1 (MQ=255)

                                                                   gCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcgc                     <  2:1000360/93‑1 (MQ=255)

                                                                      aTAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcagg                  >  1:2445563/1‑93 (MQ=255)

                                                                      aTAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcagg                  <  2:2451167/93‑1 (MQ=255)

                                                                      aTAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcagg                  >  1:6070310/1‑93 (MQ=255)

                                                                        aaTCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcaggca                <  2:143300/93‑1 (MQ=255)

                                                                         aTCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcaggcag               >  1:5789910/1‑93 (MQ=255)

                                                                           ccTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGtt             <  1:4835815/93‑1 (MQ=255)

                                                                           ccTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGtt             <  1:5104899/93‑1 (MQ=255)

                                                                            cTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTa            >  2:272732/1‑93 (MQ=255)

                                                                             tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTAt           <  2:2392809/93‑1 (MQ=255)

                                                                             tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTAt           >  2:4467932/1‑93 (MQ=255)

                                                                             tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTAt           <  2:1664403/93‑1 (MQ=255)

                                                                              gAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCCGGCAGTTATg          >  1:4185436/1‑93 (MQ=255)

                                                                              gAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATg          >  2:155725/1‑93 (MQ=255)

                                                                               aaCGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGc         >  2:3442767/1‑93 (MQ=255)

                                                                                aCGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGcc        >  1:5878951/1‑93 (MQ=255)

                                                                                aCGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGcc        <  2:4593731/93‑1 (MQ=255)

                                                                                aCGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGcc        <  2:1999675/93‑1 (MQ=255)

                                                                                 cGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCt       <  1:3695793/93‑1 (MQ=255)

                                                                                 cGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCt       <  1:2265326/93‑1 (MQ=255)

                                                                                  gTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCtt      >  1:3893976/1‑93 (MQ=255)

                                                                                   ttATGCCGAACTGTTTGGCTGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTa     <  1:829406/93‑1 (MQ=255)

                                                                                   ttATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATCCCGACCAGGCGCAGGCAGTTATGCCTTa     <  1:4467877/93‑1 (MQ=255)

                                                                                   ttATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTa     >  2:5868488/1‑93 (MQ=255)

                                                                                   ttATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTa     >  1:4567481/1‑93 (MQ=255)

                                                                                   ttATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTa     <  2:3825845/93‑1 (MQ=255)

                                                                                    tATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTAt    <  2:5690681/93‑1 (MQ=255)

                                                                                    tATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTAt    <  1:3567749/93‑1 (MQ=255)

                                                                                      tGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATgg  >  1:6195790/1‑93 (MQ=255)

AGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGG  >  NC_000913/1778389‑1778567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`