BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	204,556	C→G	P22A (CCG→GCG)	rnhB →	RNAse HII

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	204,556	0	C	G	100.0%	672.6 / NA	212	P22A (CCG→GCG)	rnhB	RNAse HII
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (103/109); total (103/109)

Only 100 of 216 total aligned reads displayed.

GGCACAAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGCCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGATCCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGCGAA  >  NC_000913/204466‑204645

ggcACAAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCg                                                                                           >  1:1656923/1‑93 (MQ=255)

 gcACAAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGt                                                                                          <  2:1424666/93‑1 (MQ=255)

 ccacaAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGt                                                                                          <  1:2047687/92‑1 (MQ=255)

  cacaAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGtt                                                                                         >  1:1198493/1‑93 (MQ=255)

   acaAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTa                                                                                        >  2:713477/1‑93 (MQ=255)

   acaAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTa                                                                                        >  2:3024550/1‑93 (MQ=255)

    caAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAg                                                                                       >  2:1067153/1‑93 (MQ=255)

    caAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAg                                                                                       <  2:154989/93‑1 (MQ=255)

    aaaGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAg                                                                                       <  2:3699075/92‑1 (MQ=255)

     acgCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGCTGAAGTCGGACGCGGGGCGTTAGt                                                                                      >  1:2345888/3‑93 (MQ=255)

     aaGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGt                                                                                      <  1:6204552/93‑1 (MQ=255)

     aaGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGt                                                                                      >  1:5057844/1‑93 (MQ=255)

      aGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGtt                                                                                     >  2:1938317/1‑93 (MQ=255)

      aGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGtt                                                                                     >  1:3820364/1‑93 (MQ=255)

       gCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTg                                                                                    >  2:3192084/1‑93 (MQ=255)

       gCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTg                                                                                    <  1:3118643/93‑1 (MQ=255)

       gCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTg                                                                                    >  1:2497576/1‑93 (MQ=255)

        ccGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTgg                                                                                   <  1:1833621/93‑1 (MQ=255)

           ttCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGgcgc                                                                                >  1:4383262/1‑93 (MQ=255)

           ttCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGgcgc                                                                                <  2:4642792/93‑1 (MQ=255)

              tGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgt                                                                             <  1:4352248/93‑1 (MQ=255)

               ggAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtc                                                                            >  2:2976808/1‑93 (MQ=255)

                gAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcg                                                                           <  2:6410436/93‑1 (MQ=255)

                 aGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcgt                                                                          <  2:2087525/93‑1 (MQ=255)

                 aGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcgt                                                                          <  2:3463826/93‑1 (MQ=255)

                  gTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTGGGACGCGGGGCGTTAGTTGGCGCGgtcgtc                                                                         <  1:2909377/93‑1 (MQ=255)

                  gTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcgtc                                                                         <  2:254234/93‑1 (MQ=255)

                  gTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcgtc                                                                         >  2:5337469/1‑93 (MQ=255)

                  gTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGgtcgtc                                                                         <  1:4444358/93‑1 (MQ=255)

                    tAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCAc                                                                       <  1:618501/93‑1 (MQ=255)

                      gCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCg                                                                     >  1:5680144/1‑93 (MQ=255)

                      gCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCg                                                                     >  1:796004/1‑93 (MQ=255)

                      gCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCg                                                                     >  2:3871908/1‑93 (MQ=255)

                       cacaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGc                                                                    <  2:6166084/93‑1 (MQ=255)

                       cacaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGc                                                                    >  1:691953/1‑93 (MQ=255)

                        acaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCt                                                                   >  2:3369172/1‑93 (MQ=255)

                        acaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCt                                                                   <  1:5963332/93‑1 (MQ=255)

                        acaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCt                                                                   >  2:4087636/1‑93 (MQ=255)

                        acaATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCCTCACCGCt                                                                   >  2:2490340/1‑93 (MQ=255)

                          aaTGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGc                                                                 <  1:3195138/93‑1 (MQ=255)

                          aaTGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGc                                                                 >  1:2062102/1‑93 (MQ=255)

                             gATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGt                                                              >  1:2298907/1‑93 (MQ=255)

                             gATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGt                                                              >  2:4872191/1‑93 (MQ=255)

                               tCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGa                                                            <  2:4386622/93‑1 (MQ=255)

                                cGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGaa                                                           >  1:1172553/1‑92 (MQ=255)

                                  aaTTTGTTTCTCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAAcc                                                         <  1:5892255/93‑1 (MQ=255)

                                   aTTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCt                                                        <  1:4231725/93‑1 (MQ=255)

                                   aTTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCt                                                        <  2:2957006/93‑1 (MQ=255)

                                   aTTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCt                                                        <  2:2205977/93‑1 (MQ=255)

                                   aTTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCt                                                        <  2:6000084/93‑1 (MQ=255)

                                       gTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGAc                                                    <  1:5201188/93‑1 (MQ=255)

                                       gTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGAc                                                    >  2:6196288/1‑93 (MQ=255)

                                       gTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGCTAGTTGGCGCGGTCGTCACCGCTGCGGTGAATCTTGAc                                                    >  2:2329538/1‑93 (MQ=255)

                                         ttATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGAccc                                                  <  2:1740394/93‑1 (MQ=255)

                                         ttATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGAccc                                                  <  2:5592660/93‑1 (MQ=255)

                                          tATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCg                                                 >  1:6680356/1‑93 (MQ=255)

                                          tATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCg                                                 >  1:6462963/1‑93 (MQ=255)

                                           aTCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCgg                                                <  2:3922241/93‑1 (MQ=255)

                                            tCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgc                                               <  1:4892937/93‑1 (MQ=255)

                                            tCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgc                                               >  1:4100085/1‑93 (MQ=255)

                                             ccGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgcg                                              >  2:6693863/1‑93 (MQ=255)

                                              cGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgcgc                                             >  2:6117065/1‑93 (MQ=255)

                                               gCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgcgcg                                            >  1:6148547/1‑93 (MQ=255)

                                                cacaCGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGgcgcgc                                           >  1:631279/1‑93 (MQ=255)

                                                 acacGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGCACCTTGACCCGgcgcgtc                                          >  1:4645896/1‑91 (MQ=255)

                                                 acacGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGcc                                          <  1:3661487/93‑1 (MQ=255)

                                                  cacGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGccc                                         <  2:3139851/93‑1 (MQ=255)

                                                   acGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCg                                        <  2:906240/93‑1 (MQ=255)

                                                     gCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGAt                                      <  1:1096767/93‑1 (MQ=255)

                                                     gCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGAt                                      <  2:5321628/93‑1 (MQ=255)

                                                       aGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGCTTg                                    >  1:3865331/1‑93 (MQ=255)

                                                        gCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑c                                  >  1:3975272/1‑93 (MQ=255)

                                                         cTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑cc                                 <  1:3055901/93‑1 (MQ=255)

                                                         cTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑cc                                 <  1:3714103/93‑1 (MQ=255)

                                                             ttGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGc                             >  2:821382/1‑93 (MQ=255)

                                                             ttGCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGc                             <  2:5269470/93‑1 (MQ=255)

                                                               gCGGGTGTGGATGAAGTCGGCCGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGccg                           >  1:2785850/1‑91 (MQ=255)

                                                               gCGGGTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑g                          >  1:5354107/1‑93 (MQ=255)

                                                                  ggTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAAt                       >  2:4142663/1‑93 (MQ=255)

                                                                  ggTGTGGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAAt                       <  1:2018146/93‑1 (MQ=255)

                                                                    tgtgGATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGa                     <  2:42730/93‑1 (MQ=255)

                                                                     gtgGAGGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGTT‑GAATGAt                    <  1:6549800/93‑1 (MQ=255)

                                                                        gATGAAGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTcc                 <  2:6434449/93‑1 (MQ=255)

                                                                             aGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCaaaaa            <  1:1347680/93‑1 (MQ=255)

                                                                             aGTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCaaaaa            <  1:1672177/93‑1 (MQ=255)

                                                                              gTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGGTTG‑CCGGGGT‑GAATGATTCCaaaaaa           >  2:1337878/1‑92 (MQ=255)

                                                                              gTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATTATTCCaaaaaa           >  1:6031465/1‑92 (MQ=255)

                                                                              gTCGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCACTGCGGTGAACCTTGACCCGGCGCGGCCGGGGGACCGGGC‑‑GAAGGATTCCAAAAAg           >  2:3679980/1‑93 (MQ=255)

                                                                               gcGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGc          <  1:4706672/92‑1 (MQ=255)

                                                                                cGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCt         <  1:4548560/93‑1 (MQ=255)

                                                                                cGGACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCCACTG‑CCGGGCT‑GGATGATTCCAAAAAACt         >  2:5873133/1‑93 (MQ=255)

                                                                                 ggACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTg        <  1:6248546/93‑1 (MQ=255)

                                                                                  gACGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGa       <  1:337060/93‑1 (MQ=255)

                                                                                   aCGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAg      <  2:5642487/93‑1 (MQ=255)

                                                                                   aCGCGGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAg      >  1:913516/1‑93 (MQ=255)

                                                                                    cgcgGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGc     <  2:1754708/93‑1 (MQ=255)

                                                                                    cgcgGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGc     <  2:6610110/93‑1 (MQ=255)

                                                                                    cgcgGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGc     <  2:852062/93‑1 (MQ=255)

                                                                                     gcgGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCCCATG‑CCCGGCTCGAAGGCTCCCAAAAAACtaacg     >  2:3531240/1‑89 (MQ=255)

                                                                                      cgGGGCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGAACCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGCGa   <  2:471860/93‑1 (MQ=255)

GGCACAAGCCGTTCTGGAGTTAGCACAATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGCCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGATCCTTGACCCGGCGCGCCCGATTG‑CCGGGCT‑GAATGATTCCAAAAAGCTGAGCGAA  >  NC_000913/204466‑204645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`