BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,928,564	T→C	T70A (ACC→GCC)	yebG ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,928,564	0	T	C	99.4%	505.1 / ‑4.8	160	T70A (ACC→GCC)	yebG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (78/81); total (79/81)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01

Only 100 of 170 total aligned reads displayed.

AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCA  >  NC_000913/1928474‑1928651

aGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGgcgc                                                                                       >  2:3626637/1‑93 (MQ=255)

aGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGgcgc                                                                                       <  1:2186324/93‑1 (MQ=255)

 gTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCt                                                                                      >  2:4436402/1‑93 (MQ=255)

  ttGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTc                                                                                     <  2:2944000/93‑1 (MQ=255)

   tGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCa                                                                                    <  1:3987224/93‑1 (MQ=255)

    gCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAg                                                                                   >  1:113279/1‑93 (MQ=255)

     cTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGc                                                                                  <  1:5075588/93‑1 (MQ=255)

     cTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGc                                                                                  >  2:5612524/1‑93 (MQ=255)

      ttCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGca                                                                                 >  2:1071158/1‑93 (MQ=255)

      ttCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGca                                                                                 <  2:2565048/93‑1 (MQ=255)

       tCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGcac                                                                                >  2:2121199/1‑93 (MQ=255)

         aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTGAGAATGGCGCTCAGCACAt                                                                              >  1:3727779/1‑93 (MQ=255)

         aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACAt                                                                              >  2:573120/1‑93 (MQ=255)

         aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACAt                                                                              >  1:4762783/1‑93 (MQ=255)

          ggCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGCTTTCAGAATGGCGCTCAGCACATc                                                                             >  1:2728897/1‑93 (MQ=255)

          ggCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTATGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATc                                                                             >  2:3853940/1‑93 (MQ=255)

               cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCttttt                                                                        <  1:4689324/93‑1 (MQ=255)

               cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCttttt                                                                        <  2:6163208/93‑1 (MQ=255)

                gtgtGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGGTCAGCCCATCTTTTTg                                                                       <  1:3047346/93‑1 (MQ=255)

                gtgtGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTg                                                                       >  2:2192153/1‑93 (MQ=255)

                gtgtGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTg                                                                       >  1:1885916/1‑93 (MQ=255)

                 tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt                                                                      >  1:1939443/1‑93 (MQ=255)

                 tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt                                                                      >  1:4101078/1‑93 (MQ=255)

                  gtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGtt                                                                     >  1:3325865/1‑93 (MQ=255)

                   tgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTc                                                                    >  2:3965115/1‑93 (MQ=255)

                   tgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTc                                                                    <  1:2763431/93‑1 (MQ=255)

                      ggCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgc                                                                 >  2:292356/1‑93 (MQ=255)

                      ggCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgc                                                                 >  1:3326516/1‑93 (MQ=255)

                        cATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgcca                                                               <  2:2771714/93‑1 (MQ=255)

                         aTCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccag                                                              >  2:194418/1‑93 (MQ=255)

                         aTCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGGAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccag                                                              >  1:719681/1‑93 (MQ=255)

                          tCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagc                                                             >  2:4512854/1‑93 (MQ=255)

                          tCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagc                                                             <  2:4857632/93‑1 (MQ=255)

                          tCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagc                                                             >  2:6463260/1‑93 (MQ=255)

                           cTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcc                                                            <  2:2321784/93‑1 (MQ=255)

                           cTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcc                                                            <  1:5729994/93‑1 (MQ=255)

                            ttCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcca                                                           <  1:4419702/93‑1 (MQ=255)

                            ttCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcca                                                           >  2:1699358/1‑93 (MQ=255)

                               ctctTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAg                                                        >  1:674440/1‑93 (MQ=255)

                                tctTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGc                                                       <  2:283110/93‑1 (MQ=255)

                                  ttCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGa                                                     >  2:5756111/1‑93 (MQ=255)

                                  ttCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGa                                                     >  2:5223339/1‑93 (MQ=255)

                                  ttCGGATTCAGCACCGACGACCTGTGGGGACGGTAATATGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGa                                                     >  1:917426/1‑93 (MQ=255)

                                    cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGaaa                                                   <  1:6440200/93‑1 (MQ=255)

                                      gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg                                                 <  1:5704120/93‑1 (MQ=255)

                                      gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg                                                 <  2:6020927/93‑1 (MQ=255)

                                       aTTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAgggg                                                >  1:5250033/1‑93 (MQ=255)

                                        ttCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGc                                               >  1:756640/1‑93 (MQ=255)

                                        ttCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGc                                               <  2:2555813/93‑1 (MQ=255)

                                         tCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCt                                              <  2:792369/93‑1 (MQ=255)

                                         tCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCt                                              <  1:1333768/93‑1 (MQ=255)

                                          cAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCtt                                             <  2:2992133/93‑1 (MQ=255)

                                            gCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                           >  1:4963260/1‑93 (MQ=255)

                                            gCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                           >  2:4458806/1‑93 (MQ=255)

                                            gCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                           >  1:3836142/1‑93 (MQ=255)

                                            gCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                           <  2:1267296/93‑1 (MQ=255)

                                             cACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCAc                                          <  1:2513654/93‑1 (MQ=255)

                                               ccGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGt                                        >  1:6183750/1‑93 (MQ=255)

                                               ccGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGt                                        >  2:5530595/1‑93 (MQ=255)

                                               ccGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGt                                        <  1:2027348/93‑1 (MQ=255)

                                               ccGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGt                                        <  2:3105150/93‑1 (MQ=255)

                                               ccGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTATTCTGCCAGCCATAGCGAAAGGGCTTCACGt                                        <  2:3810149/93‑1 (MQ=255)

                                                cgacgaCCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGtt                                       >  1:4613644/1‑93 (MQ=255)

                                                    gacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTc                                   <  1:3940351/93‑1 (MQ=255)

                                                    gacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTc                                   >  2:1353427/1‑93 (MQ=255)

                                                    gacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTc                                   >  2:6140930/1‑93 (MQ=255)

                                                      ccTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGt                                 <  1:4442662/93‑1 (MQ=255)

                                                       cTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTc                                >  2:5328932/1‑93 (MQ=255)

                                                         gtgGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCtt                              >  2:6552898/1‑93 (MQ=255)

                                                         gtgGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCtt                              >  2:5973661/1‑93 (MQ=255)

                                                          tgGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTc                             <  1:268486/93‑1 (MQ=255)

                                                           ggggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTcc                            <  1:1265115/93‑1 (MQ=255)

                                                           ggggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTcc                            <  2:2448952/93‑1 (MQ=255)

                                                            gggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCa                           <  1:666168/93‑1 (MQ=255)

                                                              gACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt                         <  2:95716/93‑1 (MQ=255)

                                                                cGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTg                       >  2:3729967/1‑93 (MQ=255)

                                                                 ggTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGc                      <  2:179041/93‑1 (MQ=255)

                                                                  gTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCa                     >  2:1389072/1‑93 (MQ=255)

                                                                    aaTTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACt                   >  2:4648287/1‑93 (MQ=255)

                                                                     aTTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTg                  >  2:4302338/1‑93 (MQ=255)

                                                                      tttGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTgg                 <  2:2668699/93‑1 (MQ=255)

                                                                      tttGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTgg                 >  1:5361332/1‑93 (MQ=255)

                                                                      tttGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTgg                 <  2:4715375/93‑1 (MQ=255)

                                                                       ttGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGga                <  2:5417566/93‑1 (MQ=255)

                                                                          ccGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGaa             <  2:6273761/93‑1 (MQ=255)

                                                                            gttattCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAtt           <  1:3398702/89‑1 (MQ=255)

                                                                            ggTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAtt           <  2:5450235/93‑1 (MQ=255)

                                                                            ggTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAtt           >  1:1661263/1‑93 (MQ=255)

                                                                             gTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAttt          <  1:914573/93‑1 (MQ=255)

                                                                             gTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAttt          >  1:1601567/1‑93 (MQ=255)

                                                                             gTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAttt          <  1:3873646/93‑1 (MQ=255)

                                                                              ttttCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTg         >  1:6585918/1‑93 (MQ=255)

                                                                              ttttCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTg         >  2:2198025/1‑93 (MQ=255)

                                                                                 tCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCa      >  1:6592677/1‑93 (MQ=255)

                                                                                 tCAGAATGGCGCTCAGCACATCTTTTTGTTCGGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCa      <  2:3195000/93‑1 (MQ=255)

                                                                                   aGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc    <  1:2917872/93‑1 (MQ=255)

                                                                                   aGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc    >  2:6065183/1‑93 (MQ=255)

                                                                                   aGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc    >  1:3666871/1‑93 (MQ=255)

                                                                                    gAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTACATTTGCACTGGAGAATTTGTCAGcc   >  1:4783126/1‑93 (MQ=255)

                                                                                     aaTGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCa  <  1:2341968/93‑1 (MQ=255)

AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCA  >  NC_000913/1928474‑1928651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`