BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,983,890	T→C	T88A (ACT→GCT)	araF ←	L‑arabinose‑binding periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,983,890	0	T	C	100.0%	704.0 / NA	215	T88A (ACT→GCT)	araF	L‑arabinose‑binding periplasmic protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/100); total (115/100)

Only 100 of 221 total aligned reads displayed.

GTTAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGTACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTTAATAA  >  NC_000913/1983801‑1983979

gTTAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGcaca                                                                                        >  1:293753/1‑93 (MQ=255)

gTTAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGcaca                                                                                        >  2:1566944/1‑93 (MQ=255)

 ttAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACaa                                                                                       >  1:4576706/1‑93 (MQ=255)

 ttAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACaa                                                                                       >  2:2393177/1‑93 (MQ=255)

  tAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACaaa                                                                                      >  1:3756498/1‑93 (MQ=255)

   aaCAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAAt                                                                                     <  2:5391547/93‑1 (MQ=255)

    aCAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATa                                                                                    >  2:6042475/1‑93 (MQ=255)

    aCAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATa                                                                                    >  1:845222/1‑93 (MQ=255)

      aaaCTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAAc                                                                                  >  1:1362879/1‑93 (MQ=255)

         cTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGaa                                                                               <  2:3776714/93‑1 (MQ=255)

         cTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGaa                                                                               >  2:6710556/1‑93 (MQ=255)

          tGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGGACAAATAACGaaa                                                                              >  1:4113474/1‑93 (MQ=255)

          tGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGaaa                                                                              >  2:3676802/1‑93 (MQ=255)

           ggTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAAc                                                                             <  2:5345270/93‑1 (MQ=255)

            gTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAAcc                                                                            >  2:3963755/1‑93 (MQ=255)

            gTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAAcc                                                                            <  1:302913/93‑1 (MQ=255)

             tcttCCCCGGCAATGACTTTCATATCGTCGCCCCGCGCTTTCGCGACGATGGCAGAGCTGAGTTTGGGGTCCGGAGCACAAATAACGAAACCt                                                                           <  1:3560407/90‑1 (MQ=255)

             tCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCt                                                                           <  2:5054299/93‑1 (MQ=255)

              cATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCtt                                                                          >  2:4412586/1‑93 (MQ=255)

              cATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCtt                                                                          >  1:5252995/1‑93 (MQ=255)

               aTCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCttt                                                                         >  2:6135195/1‑93 (MQ=255)

               aTCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCttt                                                                         <  1:6696634/93‑1 (MQ=255)

                tCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCtttt                                                                        <  1:2977867/93‑1 (MQ=255)

                tCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCtttt                                                                        >  1:2637468/1‑93 (MQ=255)

                tCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCtttt                                                                        <  1:3731320/93‑1 (MQ=255)

                 ccACGGCAATGTCTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTg                                                                       <  1:647099/93‑1 (MQ=255)

                 ccACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTg                                                                       <  1:3103089/93‑1 (MQ=255)

                  cACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGATACCTTTTgc                                                                      <  1:1648858/93‑1 (MQ=255)

                  cACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTgc                                                                      <  1:46669/93‑1 (MQ=255)

                   aCGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTgcg                                                                     >  1:5939439/1‑93 (MQ=255)

                     ggCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGcc                                                                   <  2:1284941/93‑1 (MQ=255)

                      gCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCa                                                                  <  1:6687847/93‑1 (MQ=255)

                        aaTGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACt                                                                >  2:2316065/1‑93 (MQ=255)

                        aaTGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACt                                                                >  2:6304626/1‑93 (MQ=255)

                         aTGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTg                                                               <  1:3056987/93‑1 (MQ=255)

                          tGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTgg                                                              >  1:3436871/1‑93 (MQ=255)

                           gACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGc                                                             >  1:1195244/1‑93 (MQ=255)

                           gACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGc                                                             <  1:2363269/93‑1 (MQ=255)

                            aCTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCa                                                            <  1:2595905/93‑1 (MQ=255)

                             cTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAg                                                           >  2:3352836/1‑93 (MQ=255)

                               ttCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGcc                                                         >  1:1432356/1‑93 (MQ=255)

                               ttCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGcc                                                         <  1:5059898/93‑1 (MQ=255)

                               ttCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGcc                                                         <  1:981768/93‑1 (MQ=255)

                                tCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCa                                                        <  2:6208994/93‑1 (MQ=255)

                                  atatCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAgg                                                      >  1:5964671/1‑93 (MQ=255)

                                   tatCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGc                                                     >  2:2931181/1‑93 (MQ=255)

                                    atCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCt                                                    <  1:3504796/93‑1 (MQ=255)

                                      cGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGt                                                  <  2:1602575/93‑1 (MQ=255)

                                      cGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGt                                                  <  1:5541958/93‑1 (MQ=255)

                                         aGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGa                                               <  2:5806026/93‑1 (MQ=255)

                                         aGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGa                                               >  1:2666127/1‑93 (MQ=255)

                                          gCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGAt                                              >  1:5133179/1‑93 (MQ=255)

                                          gCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGAt                                              >  2:1467478/1‑93 (MQ=255)

                                          gCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGAt                                              >  2:4729011/1‑93 (MQ=255)

                                          gCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGAt                                              <  2:3160024/93‑1 (MQ=255)

                                           ccACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATc                                             <  1:2186254/93‑1 (MQ=255)

                                              cgcgCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATcgcg                                          >  2:1838604/1‑93 (MQ=255)

                                                cgcTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGtt                                        <  2:4673197/93‑1 (MQ=255)

                                                 gcTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTc                                       >  2:3539697/1‑93 (MQ=255)

                                                 gcTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTc                                       <  1:4052227/93‑1 (MQ=255)

                                                  cTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCa                                      >  2:1667398/1‑93 (MQ=255)

                                                   tttCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCaa                                     >  1:1716990/1‑93 (MQ=255)

                                                    ttCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAAt                                    <  1:1887231/93‑1 (MQ=255)

                                                    ttCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAAt                                    <  1:1473726/93‑1 (MQ=255)

                                                      cgcgACGATGGCAGAGCCGAGTTTGGGTTCCGGAGCACAAATAACGAAACCTTTTGCCCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGt                                  <  1:580804/93‑1 (MQ=255)

                                                      cgcgACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGt                                  <  1:2648871/93‑1 (MQ=255)

                                                      cgcgACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCACGCTGTCGATCGCGTTCAATGt                                  <  1:4238924/93‑1 (MQ=255)

                                                       gcgACGATGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGtt                                 <  2:4333100/93‑1 (MQ=255)

                                                         gacgaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGtttt                               >  2:5742003/1‑93 (MQ=255)

                                                          acgaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGttttt                              <  2:189340/93‑1 (MQ=255)

                                                           cgaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGtttttt                             >  2:5603801/1‑93 (MQ=255)

                                                           cgaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGtttttt                             >  1:699493/1‑93 (MQ=255)

                                                            gaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTc                            <  1:2160874/93‑1 (MQ=255)

                                                            gaTGGCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTc                            <  1:3425972/93‑1 (MQ=255)

                                                               ggCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGcc                         <  2:219294/93‑1 (MQ=255)

                                                               ggCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGcc                         <  1:6377920/93‑1 (MQ=255)

                                                                gCAGAGCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCa                        >  2:2571002/1‑93 (MQ=255)

                                                                  agagCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATc                      >  1:65855/1‑93 (MQ=255)

                                                                   gagCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATcc                     >  1:5770837/1‑93 (MQ=255)

                                                                   gagCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATcc                     <  1:604797/93‑1 (MQ=255)

                                                                   gagCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATcc                     >  2:5007800/1‑93 (MQ=255)

                                                                    agCCGAGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCcg                    <  2:5140472/93‑1 (MQ=255)

                                                                         aGTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCcggcacg               >  2:3986753/1‑93 (MQ=255)

                                                                          gTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGCTCGCGATCAATGTTTTTTCGCCCTCcggcacgg              >  1:5607529/1‑93 (MQ=255)

                                                                          gTTTGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCcggcacgg              >  2:94006/1‑93 (MQ=255)

                                                                           tttGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCcggcacggc             >  2:563949/1‑93 (MQ=255)

                                                                             tGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCaa           <  2:5287287/93‑1 (MQ=255)

                                                                             tGGGGTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCaa           <  2:6515023/93‑1 (MQ=255)

                                                                               gggTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATc         <  2:667046/93‑1 (MQ=255)

                                                                               gggTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATc         >  1:125395/1‑93 (MQ=255)

                                                                                 gTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCtt       >  2:2819405/1‑93 (MQ=255)

                                                                                 gTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCtt       >  2:1726463/1‑93 (MQ=255)

                                                                                 gTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCtt       >  1:6286775/1‑93 (MQ=255)

                                                                                 gTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCtt       >  1:622120/1‑93 (MQ=255)

                                                                                 gTCCGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACCGCAATCtt       >  2:3433796/1‑93 (MQ=255)

                                                                                  gccGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTta      <  2:1357009/92‑1 (MQ=255)

                                                                                    cGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTtaat    <  2:506887/93‑1 (MQ=255)

                                                                                    cGGAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTtaat    <  2:233619/93‑1 (MQ=255)

                                                                                     ggAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTtaata   <  1:4721814/93‑1 (MQ=255)

                                                                                      gAGCACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTtaataa  >  1:6171487/1‑93 (MQ=255)

GTTAACAAACTGGTCATCCACGGCAATGACTTTCATATCGTAGCCACGCGCTTTCGCGACGATGGCAGAGCCGAGTTTGGGGTCCGGAGTACAAATAACGAAACCTTTTGCGCCACTGGCAGCCAGGCTGTCGATCGCGTTCAATGTTTTTTCGCCATCCGGCACGGCAATCTTAATAA  >  NC_000913/1983801‑1983979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`