BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,208,197	A→C	T360P (ACC→CCC)	b2122 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,208,197	0	A	C	99.5%	707.8 / NA	219	T360P (ACC→CCC)	b2122	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); major base C (121/96); minor base G (1/0); total (123/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 233 total aligned reads displayed.

GGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTG  >  NC_000913/2208107‑2208286

ggAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTccc                                                                                         >  1:6703797/1‑93 (MQ=255)

 gagaAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCg                                                                                        <  2:3680298/93‑1 (MQ=255)

  agaAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGa                                                                                       <  2:2233698/93‑1 (MQ=255)

  agaAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTAGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGa                                                                                       <  2:3572306/93‑1 (MQ=255)

   gaAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGAt                                                                                      <  2:876020/93‑1 (MQ=255)

    aaGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATc                                                                                     >  2:3315660/1‑93 (MQ=255)

     aGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATcc                                                                                    >  1:5062099/1‑93 (MQ=255)

     aGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATcc                                                                                    >  1:328296/1‑93 (MQ=255)

      gCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATccc                                                                                   <  1:4831210/93‑1 (MQ=255)

       cAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCg                                                                                  >  1:58380/1‑93 (MQ=255)

       cAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCg                                                                                  <  1:395069/93‑1 (MQ=255)

        aaaGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTtcccgatcccga                                                                                 >  1:824241/1‑93 (MQ=255)

        aaaGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTtcccgatcccga                                                                                 <  2:427761/93‑1 (MQ=255)

        aaaGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTtcccgatcccga                                                                                 <  2:4980748/93‑1 (MQ=255)

         aaGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGac                                                                                >  1:522362/1‑93 (MQ=255)

         aaGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGac                                                                                <  1:2984275/93‑1 (MQ=255)

           gCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGacac                                                                              >  2:6155661/1‑93 (MQ=255)

           gCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGacac                                                                              <  2:4940605/93‑1 (MQ=255)

           gCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGacac                                                                              <  2:4885043/93‑1 (MQ=255)

           gCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGGTTACGCATCTGGTTTCCCGATCCCGacac                                                                              >  2:6556967/1‑93 (MQ=255)

            cTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCAGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACAcc                                                                             >  1:872057/1‑93 (MQ=255)

             ttGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCg                                                                            >  2:1373035/1‑93 (MQ=255)

             ttGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCg                                                                            >  2:1431027/1‑93 (MQ=255)

             ttGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCg                                                                            >  2:3709823/1‑93 (MQ=255)

             ttGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCg                                                                            >  1:3810235/1‑93 (MQ=255)

               gATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGc                                                                          >  2:5904133/1‑93 (MQ=255)

               gATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGc                                                                          >  2:2428647/1‑93 (MQ=255)

                atcatcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCa                                                                         >  2:6092058/1‑93 (MQ=255)

                atcatcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCa                                                                         >  1:6726964/1‑93 (MQ=255)

                 tcatcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAg                                                                        <  2:4417722/93‑1 (MQ=255)

                 tcatcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAg                                                                        <  2:4084375/93‑1 (MQ=255)

                  catcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGt                                                                       >  2:6266463/1‑93 (MQ=255)

                    tcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGGTATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTAt                                                                     >  2:1887753/1‑93 (MQ=255)

                    tcTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTAt                                                                     >  2:2218128/1‑93 (MQ=255)

                      tGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTAttt                                                                   <  1:1833358/93‑1 (MQ=255)

                      tGCGGCTGGTGTCTTTAGGTATGCGCTGCTGGCAGGATATTGAGCATTTTGGTTTACGCATCTGGTTTCCCGACCCCGACAACGGCAGTAttt                                                                   >  1:2896666/1‑93 (MQ=255)

                       gCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTAtttt                                                                  >  1:3300203/1‑93 (MQ=255)

                       gCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGGTTCCCGATCACGCCACCGGCAGTAtttt                                                                  >  2:3222579/1‑93 (MQ=255)

                        cGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTg                                                                 >  2:1546107/1‑93 (MQ=255)

                         ggCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGc                                                                >  1:6478101/1‑93 (MQ=255)

                           cTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCAc                                                              >  1:6359043/1‑93 (MQ=255)

                            tGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCGCGATCCCGACACCGGCAGTATTTTGCAcc                                                             >  2:6068736/1‑93 (MQ=255)

                            tGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCAcc                                                             >  2:6683422/1‑93 (MQ=255)

                             ggTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCt                                                            >  2:529480/1‑93 (MQ=255)

                              gtgtCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCtt                                                           <  1:6300425/93‑1 (MQ=255)

                              gtgtCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCtt                                                           <  2:3981358/93‑1 (MQ=255)

                                gtCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTc                                                         >  2:4108334/1‑93 (MQ=255)

                                 tCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCttttg                                                        >  2:2552702/1‑91 (MQ=255)

                                   tttAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTcgcg                                                      >  1:1698022/1‑93 (MQ=255)

                                   tttAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTcgcg                                                      >  2:676964/1‑93 (MQ=255)

                                       ggTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGt                                                  >  1:5877025/1‑93 (MQ=255)

                                         tATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTg                                                <  1:6595644/93‑1 (MQ=255)

                                         tATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTg                                                >  2:5515100/1‑93 (MQ=255)

                                         tATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTg                                                >  2:5635272/1‑93 (MQ=255)

                                           tGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGc                                              <  2:1912762/93‑1 (MQ=255)

                                            gCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGcc                                             <  1:2050459/93‑1 (MQ=255)

                                              gTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCcgc                                           <  1:5709098/93‑1 (MQ=255)

                                              gTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCcgc                                           >  1:2105855/1‑93 (MQ=255)

                                                 gCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGaa                                        <  1:942798/93‑1 (MQ=255)

                                                   tGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGt                                      >  2:4588225/1‑93 (MQ=255)

                                                    ggCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTg                                     >  1:1299732/1‑93 (MQ=255)

                                                     gCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGa                                    >  2:4748640/1‑93 (MQ=255)

                                                     gCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGa                                    <  1:2183564/93‑1 (MQ=255)

                                                        ggATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGCCACCGGCAGTATTTTGCACATTTCGCGCAGTTGGCCGCGAGGTGAACa                                 >  2:639652/1‑93 (MQ=255)

                                                        ggATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACa                                 >  2:1814280/1‑93 (MQ=255)

                                                        ggATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACa                                 <  2:1667852/93‑1 (MQ=255)

                                                         gATATTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTAGGCCGCGAAGTGAACAg                                >  1:4505864/1‑93 (MQ=255)

                                                           tatTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGa                              <  2:2604933/93‑1 (MQ=255)

                                                           tatTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGa                              >  2:3523119/1‑93 (MQ=255)

                                                            atTGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGaa                             >  1:5351761/1‑93 (MQ=255)

                                                             ttGAGCATTATGGTTTACGCATCTGGTTTGCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGGGAACACGaaa                            >  1:309344/1‑93 (MQ=255)

                                                             ttGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGaaa                            >  1:3634921/1‑93 (MQ=255)

                                                             ttGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGaaa                            <  1:5581980/93‑1 (MQ=255)

                                                              tGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGaaaa                           >  1:4215579/1‑93 (MQ=255)

                                                              tGAGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGaaaa                           >  1:3395414/1‑93 (MQ=255)

                                                                aGCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACt                         >  2:2173014/1‑93 (MQ=255)

                                                                 gCATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTc                        <  2:3598096/93‑1 (MQ=255)

                                                                  cATTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCa                       <  2:2402862/93‑1 (MQ=255)

                                                                   aTTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCAc                      <  1:1502377/93‑1 (MQ=255)

                                                                   aTTATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCAc                      <  2:4642491/93‑1 (MQ=255)

                                                                    ttATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCAcc                     >  1:3976440/1‑93 (MQ=255)

                                                                    ttATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCAcc                     >  2:1563726/1‑93 (MQ=255)

                                                                     tATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCg                    <  1:132748/93‑1 (MQ=255)

                                                                     tATGGTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCg                    <  1:2342756/93‑1 (MQ=255)

                                                                        ggTTTACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCa                 >  1:324525/1‑93 (MQ=255)

                                                                          tttACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGc               <  2:1283630/93‑1 (MQ=255)

                                                                           ttACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCt              <  2:2805555/93‑1 (MQ=255)

                                                                            tACGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTa             <  2:3567834/93‑1 (MQ=255)

                                                                              cGCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTAcg           <  1:1009294/93‑1 (MQ=255)

                                                                               gCATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTAcgc          >  2:3920095/1‑93 (MQ=255)

                                                                                cATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTAcgcg         >  2:5771970/1‑93 (MQ=255)

                                                                                cATCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTAcgcg         <  1:4665422/93‑1 (MQ=255)

                                                                                 aTCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGt        <  1:2646901/93‑1 (MQ=255)

                                                                                 aTCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGt        >  2:3882868/1‑93 (MQ=255)

                                                                                 aTCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGt        <  2:2797471/93‑1 (MQ=255)

                                                                                  tCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTAcgcgcc       >  1:1733995/1‑91 (MQ=255)

                                                                                  tCTGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTc       >  1:5493650/1‑93 (MQ=255)

                                                                                    tGGTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCgg     >  1:259688/1‑93 (MQ=255)

                                                                                     ggTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGc    <  1:4363424/93‑1 (MQ=255)

                                                                                      gTTTCCCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCt   <  2:3402475/93‑1 (MQ=255)

GGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTG  >  NC_000913/2208107‑2208286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`