BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,268,593	T→C	intergenic (+28/‑153)	spr → / → rtn	putative lipoprotein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,268,593	0	T	C	100.0%	946.4 / NA	284	intergenic (+28/‑153)	spr/rtn	putative lipoprotein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (133/151); total (133/151)

Only 100 of 287 total aligned reads displayed.

ATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCA  >  NC_000913/2268503‑2268682

atgaatgaACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCAt                                                                                         >  1:964317/1‑93 (MQ=255)

  gaatgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATcc                                                                                       <  1:4291953/93‑1 (MQ=255)

    atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg                                                                                     >  1:1000720/1‑93 (MQ=255)

    atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg                                                                                     >  1:5376928/1‑93 (MQ=255)

    atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTg                                                                                     >  2:2724051/1‑93 (MQ=255)

    atgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGATCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCCTCCTg                                                                                     >  1:312994/1‑93 (MQ=255)

     tgaaCCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGa                                                                                    <  1:2656639/93‑1 (MQ=255)

      gaaCCGTACTGGAAGAAGCGTTACCACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGAc                                                                                   >  1:6460668/1‑93 (MQ=255)

         ccGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAg                                                                                >  1:5077476/1‑93 (MQ=255)

         ccGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAg                                                                                >  2:4983670/1‑93 (MQ=255)

          cGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGt                                                                               <  1:2361115/93‑1 (MQ=255)

           gTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTCTGGATGCAATCCCTTGGCCATCCTGACGAGtt                                                                              >  1:6678566/1‑93 (MQ=255)

            tACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTa                                                                             >  1:3167604/1‑93 (MQ=255)

              cTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAAc                                                                           <  1:2718018/93‑1 (MQ=255)

              cTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAAc                                                                           >  1:1344251/1‑93 (MQ=255)

               tGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACt                                                                          >  2:2553529/1‑93 (MQ=255)

                ggAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTg                                                                         >  1:557427/1‑93 (MQ=255)

                      agCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCa                                                                   <  1:252604/93‑1 (MQ=255)

                      agCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCa                                                                   <  1:3511556/93‑1 (MQ=255)

                       gCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAATCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAc                                                                  <  2:3914467/93‑1 (MQ=255)

                       gCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCAc                                                                  <  1:258974/93‑1 (MQ=255)

                        cGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACt                                                                 <  1:5988285/93‑1 (MQ=255)

                          ttACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGc                                                               >  2:6443779/1‑93 (MQ=255)

                          ttACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGc                                                               <  2:2354949/93‑1 (MQ=255)

                           tACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCt                                                              >  1:4022975/1‑93 (MQ=255)

                              aaCGAAGCACGCTGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAg                                                           <  2:2476875/93‑1 (MQ=255)

                              aaCGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAg                                                           <  2:1300757/93‑1 (MQ=255)

                               aCGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAgg                                                          <  2:925515/93‑1 (MQ=255)

                                cGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGGTAACTGAAAGCACTGCTTAGGc                                                         >  1:4648583/1‑93 (MQ=255)

                                 gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa                                                        <  2:1365866/93‑1 (MQ=255)

                                 gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa                                                        <  1:4806069/93‑1 (MQ=255)

                                 gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa                                                        <  2:6114945/93‑1 (MQ=255)

                                 gAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCa                                                        <  2:863059/93‑1 (MQ=255)

                                   aGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGt                                                      >  1:410159/1‑93 (MQ=255)

                                   aGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGt                                                      <  1:539164/93‑1 (MQ=255)

                                      aCGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCt                                                   <  2:5244225/93‑1 (MQ=255)

                                      aCGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCt                                                   >  1:2248803/1‑93 (MQ=255)

                                         ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt                                                >  1:2019984/1‑93 (MQ=255)

                                         ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt                                                <  1:741526/93‑1 (MQ=255)

                                         ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt                                                <  1:5616329/93‑1 (MQ=255)

                                         ccGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttt                                                <  2:4938069/93‑1 (MQ=255)

                                          cGGTTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCttttt                                               <  1:5709468/93‑1 (MQ=255)

                                          cGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTACCTGAAAGCACTGCTTAGGCAGTGCttttt                                               <  2:580445/93‑1 (MQ=255)

                                          cGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCttttt                                               <  2:1922997/93‑1 (MQ=255)

                                           gggTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCtttttt                                              >  1:1154680/1‑93 (MQ=255)

                                               tctcAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGttt                                          <  2:5387975/93‑1 (MQ=255)

                                                ctcAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGtttt                                         <  1:901748/93‑1 (MQ=255)

                                                  cAGCCGCAGCTAATCAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca                                       <  1:6209680/93‑1 (MQ=255)

                                                  cAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca                                       >  2:1457050/1‑93 (MQ=255)

                                                  cAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttca                                       <  1:3943568/93‑1 (MQ=255)

                                                   aGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcat                                      <  2:2712241/93‑1 (MQ=255)

                                                   aGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcat                                      <  1:3009002/93‑1 (MQ=255)

                                                    gCCGCAGCTAATAGACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt                                     <  2:3798535/93‑1 (MQ=255)

                                                    gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt                                     >  2:4912347/1‑93 (MQ=255)

                                                    gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt                                     <  1:1668964/93‑1 (MQ=255)

                                                    gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt                                     >  1:2475846/1‑93 (MQ=255)

                                                    gCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcatt                                     <  2:262221/93‑1 (MQ=255)

                                                     ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc                                    <  2:3266171/93‑1 (MQ=255)

                                                     ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc                                    >  1:4445861/1‑93 (MQ=255)

                                                     ccGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattc                                    <  2:1689535/93‑1 (MQ=255)

                                                      cGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattca                                   >  2:774874/1‑93 (MQ=255)

                                                      cGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTttcattca                                   <  1:5189681/93‑1 (MQ=255)

                                                         aGCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATtcatca                                <  2:2089263/93‑1 (MQ=255)

                                                          gCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCag                               <  1:861070/93‑1 (MQ=255)

                                                          gCTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCag                               >  1:4873606/1‑93 (MQ=255)

                                                           cTAATAAACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCaga                              <  1:1404618/93‑1 (MQ=255)

                                                            taataaACCGTTTGGATGCTATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag                             >  1:6566346/1‑93 (MQ=255)

                                                            taataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag                             >  2:400240/1‑93 (MQ=255)

                                                            taataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCagag                             >  2:6027129/1‑93 (MQ=255)

                                                             aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga                            >  1:1537988/1‑93 (MQ=255)

                                                             aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga                            >  2:4538652/1‑93 (MQ=255)

                                                             aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga                            <  2:2224826/93‑1 (MQ=255)

                                                             aataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAgaga                            <  2:43388/93‑1 (MQ=255)

                                                              ataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaa                           <  2:1185964/93‑1 (MQ=255)

                                                              ataaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaa                           >  2:2178049/1‑93 (MQ=255)

                                                               taaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaa                          <  1:2289331/93‑1 (MQ=255)

                                                               taaACCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaa                          >  1:4999713/1‑93 (MQ=255)

                                                                aaaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGaaaa                         <  1:1649523/93‑1 (MQ=255)

                                                                 aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat                        <  1:1268548/93‑1 (MQ=255)

                                                                 aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat                        <  1:5865961/93‑1 (MQ=255)

                                                                 aaCCGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAat                        <  2:3840870/93‑1 (MQ=255)

                                                                   ccGTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatga                      <  2:3554228/93‑1 (MQ=255)

                                                                     gTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatgatg                    <  1:3414675/93‑1 (MQ=255)

                                                                     gTTTGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAatgatg                    >  2:4681908/1‑93 (MQ=255)

                                                                      tttGGATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGt                   >  1:6293162/1‑93 (MQ=255)

                                                                         ggATGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTc                <  1:4927060/93‑1 (MQ=255)

                                                                            tGCAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCcgc             >  2:636495/1‑93 (MQ=255)

                                                                              cAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGt           >  2:3084748/1‑93 (MQ=255)

                                                                              cAATCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGt           >  1:1579261/1‑93 (MQ=255)

                                                                               aaTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTc          >  2:5503554/1‑93 (MQ=255)

                                                                               aaTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTc          <  2:4093817/93‑1 (MQ=255)

                                                                                aTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCt         >  1:1839579/1‑93 (MQ=255)

                                                                                aTCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCt         >  2:651020/1‑93 (MQ=255)

                                                                                 tCCCTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCtt        <  1:3628899/93‑1 (MQ=255)

                                                                                   ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa      <  2:2972508/93‑1 (MQ=255)

                                                                                   ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa      >  2:6642925/1‑93 (MQ=255)

                                                                                   ccTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGa      <  1:5640462/93‑1 (MQ=255)

                                                                                    cTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAt     <  1:2963857/93‑1 (MQ=255)

                                                                                    cTTGGCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGAt     <  1:632236/93‑1 (MQ=255)

                                                                                       ggCCATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCa  <  2:3669831/93‑1 (MQ=255)

ATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAATAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCATTCATCAGAGAAAATGATGTTTCCGCGTCTTGATCCA  >  NC_000913/2268503‑2268682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`