BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,276,343	T→C	intergenic (‑86/+247)	yejG ← / ← bcr	hypothetical protein/bicyclomycin resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,276,343	0	T	C	100.0%	824.9 / NA	249	intergenic (‑86/+247)	yejG/bcr	hypothetical protein/bicyclomycin resistance protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/115); total (134/115)

Only 100 of 250 total aligned reads displayed.

GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC  >  NC_000913/2276253‑2276432

gTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaa                                                                                         >  1:195862/1‑93 (MQ=255)

gTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaa                                                                                         >  2:3586624/1‑93 (MQ=255)

 tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa                                                                                        >  1:5779271/1‑93 (MQ=255)

   aCTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGa                                                                                      <  1:791686/93‑1 (MQ=255)

   aCTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGa                                                                                      <  1:3877554/93‑1 (MQ=255)

   aCTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGa                                                                                      >  2:5273103/1‑93 (MQ=255)

     ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt                                                                                    >  1:1265253/1‑93 (MQ=255)

     ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt                                                                                    >  2:2898562/1‑93 (MQ=255)

     ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt                                                                                    <  2:3299712/93‑1 (MQ=255)

       aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa                                                                                  <  2:2849529/93‑1 (MQ=255)

       aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa                                                                                  >  2:4686396/1‑93 (MQ=255)

        ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt                                                                                 <  1:586232/93‑1 (MQ=255)

         tttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATg                                                                                >  1:4254719/1‑93 (MQ=255)

           tCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGcc                                                                              >  2:1164341/1‑93 (MQ=255)

            ccccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCt                                                                             <  2:4926510/93‑1 (MQ=255)

             cccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTc                                                                            <  2:5480981/93‑1 (MQ=255)

              ccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCg                                                                           >  2:4466669/1‑93 (MQ=255)

               cGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGc                                                                          <  1:3967577/93‑1 (MQ=255)

                 gAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCt                                                                        >  2:5902719/1‑93 (MQ=255)

                 gAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCt                                                                        >  2:2219674/1‑93 (MQ=255)

                  aaGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTg                                                                       >  1:5272427/1‑93 (MQ=255)

                   aGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGc                                                                      >  1:5450058/1‑93 (MQ=255)

                   aGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGc                                                                      >  2:2770052/1‑93 (MQ=255)

                   aGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCCGc                                                                      >  1:6660645/1‑93 (MQ=255)

                      acaTTCACATCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg                                                                   >  1:6556230/1‑93 (MQ=255)

                       caTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTgg                                                                  <  1:3433142/93‑1 (MQ=255)

                       caTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTgg                                                                  >  2:584366/1‑93 (MQ=255)

                       caTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTgg                                                                  >  1:2031034/1‑93 (MQ=255)

                        aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc                                                                 >  1:3281500/1‑93 (MQ=255)

                        aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc                                                                 >  1:3127620/1‑93 (MQ=255)

                        aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc                                                                 >  2:4841459/1‑93 (MQ=255)

                         ttcacttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGcc                                                                <  1:2953224/93‑1 (MQ=255)

                         atcacttcacAATTTGTTTACATCAATTGTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGcc                                                                <  2:3392897/92‑1 (MQ=255)

                           cacttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctc                                                              >  2:477253/1‑93 (MQ=255)

                            acttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct                                                             >  1:4318231/1‑93 (MQ=255)

                            acttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct                                                             >  2:215721/1‑93 (MQ=255)

                            acttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct                                                             >  2:6345985/1‑93 (MQ=255)

                             cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa                                                            <  2:694207/93‑1 (MQ=255)

                             cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa                                                            <  1:1070866/93‑1 (MQ=255)

                             cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa                                                            <  1:4717311/93‑1 (MQ=255)

                              ttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAt                                                           <  1:657062/93‑1 (MQ=255)

                              ttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAt                                                           >  2:1686899/1‑93 (MQ=255)

                               tcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATg                                                          <  2:4442927/93‑1 (MQ=255)

                                 acaATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGc                                                        <  1:1205183/93‑1 (MQ=255)

                                 acaATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGc                                                        <  2:4049012/93‑1 (MQ=255)

                                  caATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGct                                                       >  1:1359495/1‑93 (MQ=255)

                                  caATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGct                                                       <  1:2602765/93‑1 (MQ=255)

                                   aaTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctc                                                      >  2:6208987/1‑93 (MQ=255)

                                   aaTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctc                                                      >  2:2446202/1‑93 (MQ=255)

                                    aTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCTCCTGCGTGGCCTCTATGGctct                                                     >  2:2611751/1‑93 (MQ=255)

                                    aTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctct                                                     <  2:5090175/93‑1 (MQ=255)

                                    aTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctct                                                     <  1:1829019/93‑1 (MQ=255)

                                     tttGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGTCTGCGTGGCCTCTATGGCTCTg                                                    >  1:2383502/1‑93 (MQ=255)

                                       tGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAt                                                  <  2:3546327/93‑1 (MQ=255)

                                         tttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAttt                                                <  2:1499452/93‑1 (MQ=255)

                                         tttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAttt                                                >  2:5587253/1‑93 (MQ=255)

                                          ttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTa                                               >  2:6133743/1‑93 (MQ=255)

                                            aCATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGTCTCTATGGCTCTGATTTAAg                                             <  1:5441479/93‑1 (MQ=255)

                                            aCATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAg                                             <  2:1681573/93‑1 (MQ=255)

                                             cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt                                            <  2:4075268/93‑1 (MQ=255)

                                              aTCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTa                                           >  1:421830/1‑93 (MQ=255)

                                              aTCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTa                                           >  1:4980481/1‑93 (MQ=255)

                                               tCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTaa                                          <  2:1085011/93‑1 (MQ=255)

                                               tCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTaa                                          <  1:2820784/93‑1 (MQ=255)

                                                 aaTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGTCCTCTTTGGCTCTGATTTAAGTAata                                        <  1:6454447/93‑1 (MQ=255)

                                                  aTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAatat                                       >  1:988181/1‑93 (MQ=255)

                                                   ttttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATc                                      <  1:6426409/93‑1 (MQ=255)

                                                    tttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCt                                     <  1:1013199/93‑1 (MQ=255)

                                                    tttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCt                                     <  1:1656345/93‑1 (MQ=255)

                                                     ttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTg                                    >  1:4101757/1‑93 (MQ=255)

                                                       aaCACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCg                                  >  1:1938893/1‑93 (MQ=255)

                                                        acacATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCgg                                 <  1:6184741/93‑1 (MQ=255)

                                                         cacaTCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCggg                                >  2:5239228/1‑93 (MQ=255)

                                                          acaTCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCggga                               >  1:2129888/1‑92 (MQ=255)

                                                           catcatCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCg                              >  1:4057561/1‑93 (MQ=255)

                                                              catcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTgg                           >  2:5726064/1‑93 (MQ=255)

                                                               atcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGt                          >  1:3661168/1‑93 (MQ=255)

                                                               atcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGt                          >  2:3924699/1‑93 (MQ=255)

                                                                tcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTc                         <  1:2283289/93‑1 (MQ=255)

                                                                 caacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCa                        >  1:5054505/1‑93 (MQ=255)

                                                                 caacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCa                        <  2:4629405/93‑1 (MQ=255)

                                                                 caacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCa                        >  2:2334080/1‑93 (MQ=255)

                                                                   acaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACg                      >  2:6620511/1‑93 (MQ=255)

                                                                   acaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACg                      >  2:6422121/1‑93 (MQ=255)

                                                                      aTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGttt                   <  1:2691621/93‑1 (MQ=255)

                                                                      aTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGttt                   >  1:2896860/1‑93 (MQ=255)

                                                                       tCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTg                  >  2:195487/1‑93 (MQ=255)

                                                                       tCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGGTTg                  >  1:3411351/1‑93 (MQ=255)

                                                                         cGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCg                <  2:3714493/93‑1 (MQ=255)

                                                                           tCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCggg              >  1:3708986/1‑93 (MQ=255)

                                                                            cTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCgggg             <  1:5939512/93‑1 (MQ=255)

                                                                             tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGc            <  2:5381829/93‑1 (MQ=255)

                                                                              ttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCt           >  1:1341824/1‑93 (MQ=255)

                                                                                ataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtat         <  2:3863838/93‑1 (MQ=255)

                                                                                 taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        <  1:4372638/93‑1 (MQ=255)

                                                                                 taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        <  2:3629064/93‑1 (MQ=255)

                                                                                     gATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTa    >  1:2720956/1‑93 (MQ=255)

                                                                                     gATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTa    >  1:5172874/1‑93 (MQ=255)

                                                                                      aTCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAc   >  1:4901891/1‑93 (MQ=255)

                                                                                       tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc  <  2:304849/93‑1 (MQ=255)

GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC  >  NC_000913/2276253‑2276432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`