Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 274,443 C→T intergenic (‑102/‑106) trs51 ← / → ykfD IS5 transposase/putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913274,4430CT99.6% 834.3 / NA 228intergenic (‑102/‑106)trs51/ykfDIS5 transposase/putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (118/109);  total (119/109)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 236 total aligned reads displayed.

AGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTC  >  NC_000913/274353‑274529
                                                                                          |                                                                                      
aGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGgtgc                                                                                      >  2:3850811/1‑93 (MQ=255)
aGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGgtgc                                                                                      >  1:2997284/1‑93 (MQ=255)
 gggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTTTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGtgcg                                                                                     >  1:857909/1‑93 (MQ=255)
  ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCgg                                                                                    <  1:5329013/93‑1 (MQ=255)
  ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCgg                                                                                    >  1:5288583/1‑93 (MQ=255)
  ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCgg                                                                                    <  1:2930899/93‑1 (MQ=255)
  ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCgg                                                                                    <  2:4780095/93‑1 (MQ=255)
  ggACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCgg                                                                                    >  2:5453545/1‑93 (MQ=255)
    aCTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGc                                                                                  >  2:2098959/1‑93 (MQ=255)
    aCTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGc                                                                                  >  1:3383390/1‑93 (MQ=255)
     cTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCa                                                                                 >  1:116303/1‑93 (MQ=255)
      ttGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCAt                                                                                <  2:2504921/93‑1 (MQ=255)
      ttGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCAt                                                                                >  2:5743168/1‑93 (MQ=255)
      ttGTTCGCACCTTCCGGAGGCGTTATGAGCTGCCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCAt                                                                                <  1:1691748/93‑1 (MQ=255)
       tgctCGCACCTTCTGCAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATc                                                                               <  1:2271235/90‑1 (MQ=255)
       tGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATc                                                                               >  1:803172/1‑93 (MQ=255)
        gTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCt                                                                              <  2:5884039/93‑1 (MQ=255)
           cGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCg                                                                           >  1:5686415/1‑93 (MQ=255)
            gCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGt                                                                          >  1:2291692/1‑93 (MQ=255)
             cACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTc                                                                         <  2:1442827/93‑1 (MQ=255)
              gccTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCt                                                                        <  2:3449509/92‑1 (MQ=255)
               ccTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTg                                                                       <  2:4107962/93‑1 (MQ=255)
               ccTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTg                                                                       >  1:588817/1‑93 (MQ=255)
               ccTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTg                                                                       >  1:4016028/1‑93 (MQ=255)
                cTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTgg                                                                      <  2:5351010/93‑1 (MQ=255)
                cTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTgg                                                                      >  1:1322862/1‑93 (MQ=255)
                 ttCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTggg                                                                     >  1:4091237/1‑92 (MQ=255)
                 ttCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGt                                                                     >  2:1928195/1‑93 (MQ=255)
                  tCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTg                                                                    >  1:3283376/1‑93 (MQ=255)
                   ccGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGc                                                                   >  2:3896082/1‑93 (MQ=255)
                    cGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCa                                                                  >  2:2288897/1‑93 (MQ=255)
                    cGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCa                                                                  <  2:2966842/93‑1 (MQ=255)
                       aGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAggg                                                               >  2:26717/1‑93 (MQ=255)
                        ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGt                                                              >  1:2700344/1‑93 (MQ=255)
                        ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGt                                                              <  2:1643056/93‑1 (MQ=255)
                        ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGt                                                              <  1:4967249/93‑1 (MQ=255)
                        ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGt                                                              >  2:5570927/1‑93 (MQ=255)
                        ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGt                                                              >  1:3443016/1‑93 (MQ=255)
                           gTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGa                                                           >  2:3097101/1‑93 (MQ=255)
                           gTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGa                                                           >  1:5133864/1‑93 (MQ=255)
                           gTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGa                                                           >  2:3656490/1‑93 (MQ=255)
                            ttATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGAc                                                          >  1:2503695/1‑93 (MQ=255)
                               tGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACttt                                                       <  2:4265187/93‑1 (MQ=255)
                                  gCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCa                                                    <  1:3947354/93‑1 (MQ=255)
                                    tGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCAtt                                                  >  2:5067203/1‑93 (MQ=255)
                                       cggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTg                                               <  2:6675504/93‑1 (MQ=255)
                                       cggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTg                                               >  1:1088346/1‑93 (MQ=255)
                                        ggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGt                                              <  1:5986351/93‑1 (MQ=255)
                                         gcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGtt                                             >  2:6325493/1‑93 (MQ=255)
                                         gcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGtt                                             >  1:6297127/1‑93 (MQ=255)
                                         gcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGtt                                             <  2:2404214/93‑1 (MQ=255)
                                           ccTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTaa                                           <  1:4592251/93‑1 (MQ=255)
                                           ccTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTaa                                           <  1:1490348/93‑1 (MQ=255)
                                             tttttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACa                                         >  1:2632294/1‑93 (MQ=255)
                                              ttttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACaa                                        >  1:2422678/1‑93 (MQ=255)
                                              ttttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACaa                                        >  2:283831/1‑93 (MQ=255)
                                              ttttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACaa                                        >  2:1523933/1‑93 (MQ=255)
                                               tttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACaaa                                       <  2:89593/93‑1 (MQ=255)
                                                 tGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                     >  2:5326259/1‑93 (MQ=255)
                                                   tATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAAcgcg                                   <  2:3739698/93‑1 (MQ=255)
                                                    aTCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCgg                                  >  2:3233954/1‑93 (MQ=255)
                                                     tCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGt                                 <  1:2020806/93‑1 (MQ=255)
                                                      cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                <  1:1273345/93‑1 (MQ=255)
                                                      cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                <  1:1420516/93‑1 (MQ=255)
                                                      cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                <  1:1758825/93‑1 (MQ=255)
                                                       tGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGtat                               >  2:5972073/1‑93 (MQ=255)
                                                       tGATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGtat                               <  1:5729432/93‑1 (MQ=255)
                                                        gATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGtata                              >  2:1206880/1‑93 (MQ=255)
                                                        gATTATTAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGtata                              >  2:2853140/1‑93 (MQ=255)
                                                         attattAATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATaa                             <  2:2730543/93‑1 (MQ=255)
                                                          ttattaATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAAc                            <  2:2797362/93‑1 (MQ=255)
                                                          ttattaATCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAAc                            >  1:2889918/1‑93 (MQ=255)
                                                               aaTCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAcc                       >  2:2025128/1‑93 (MQ=255)
                                                                aTCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                      <  1:3883725/93‑1 (MQ=255)
                                                                aTCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                      <  1:6621744/93‑1 (MQ=255)
                                                                aTCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                      <  2:3784402/93‑1 (MQ=255)
                                                                aTCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                      >  1:4369779/1‑93 (MQ=255)
                                                                 tCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACctt                     >  1:1849716/1‑93 (MQ=255)
                                                                 tCCCCACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACctt                     <  1:2434552/93‑1 (MQ=255)
                                                                  ccccACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                    <  1:3076825/93‑1 (MQ=255)
                                                                  ccccACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                    <  1:4630389/93‑1 (MQ=255)
                                                                   cccACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttct                   <  2:851715/93‑1 (MQ=255)
                                                                   cccACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttct                   <  2:5504615/93‑1 (MQ=255)
                                                                    ccACCCGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttctt                  >  1:5229149/1‑93 (MQ=255)
                                                                       cccGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg               >  1:4547703/1‑93 (MQ=255)
                                                                       cccGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg               >  2:3385067/1‑93 (MQ=255)
                                                                        ccGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGa              <  1:751263/93‑1 (MQ=255)
                                                                         cGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGAt             >  2:6120566/1‑93 (MQ=255)
                                                                         cGCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGAt             <  1:2088641/93‑1 (MQ=255)
                                                                          gCTATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATg            >  1:6204209/1‑93 (MQ=255)
                                                                            tATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt          <  2:1512307/93‑1 (MQ=255)
                                                                            tATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt          <  2:2246715/93‑1 (MQ=255)
                                                                            tATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt          >  1:3604018/1‑93 (MQ=255)
                                                                            tATTAAGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt          <  2:2451/93‑1 (MQ=255)
                                                                                aaGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGa      <  1:2601385/93‑1 (MQ=255)
                                                                                aaGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGa      <  1:5779555/93‑1 (MQ=255)
                                                                                 aGCGCCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGAt     >  2:4868028/1‑93 (MQ=255)
                                                                                  gcgcCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATg    >  2:1070841/1‑93 (MQ=255)
                                                                                    gcCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTc  <  1:2117062/93‑1 (MQ=255)
                                                                                    gcCCGGTGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTc  <  1:2850094/93‑1 (MQ=255)
                                                                                          |                                                                                      
AGGGACTTGTTCGCACCTTCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTC  >  NC_000913/274353‑274529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: