BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,289,112	T→C	V198A (GTC→GCC)	narP →	nitrate/nitrite response regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,289,112	0	T	C	100.0%	867.3 / NA	265	V198A (GTC→GCC)	narP	nitrate/nitrite response regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (166/99); total (166/99)

Only 100 of 272 total aligned reads displayed.

GGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAT  >  NC_000913/2289022‑2289201

ggCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGccc                                                                                         <  1:5502176/93‑1 (MQ=255)

  cTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGc                                                                                       >  2:1756019/1‑93 (MQ=255)

   tGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCt                                                                                      <  1:1683677/93‑1 (MQ=255)

    gTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTc                                                                                     >  2:6152684/1‑93 (MQ=255)

     tCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCa                                                                                    >  2:2865511/1‑93 (MQ=255)

      cAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAc                                                                                   >  1:4968601/1‑93 (MQ=255)

      cAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAc                                                                                   <  2:221262/93‑1 (MQ=255)

       aaaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcg                                                                                  >  2:3466614/1‑93 (MQ=255)

        aaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcgc                                                                                 <  2:690173/93‑1 (MQ=255)

        aaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcgc                                                                                 >  2:1591457/1‑93 (MQ=255)

        aaTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcgc                                                                                 >  2:2982063/1‑93 (MQ=255)

         aTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcgcg                                                                                <  2:1152723/93‑1 (MQ=255)

         aTAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCAcgcg                                                                                >  2:861666/1‑93 (MQ=255)

          tAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGt                                                                               >  2:1041421/1‑93 (MQ=255)

            aaCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTgg                                                                             >  1:1778055/1‑93 (MQ=255)

             aCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTggc                                                                            >  1:1644558/1‑93 (MQ=255)

             aCAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTggc                                                                            >  1:5714522/1‑93 (MQ=255)

                  ttGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGcca                                                                       >  1:2675209/1‑93 (MQ=255)

                    gCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGccacc                                                                     >  2:649417/1‑93 (MQ=255)

                      cTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCAt                                                                   >  2:3696527/1‑93 (MQ=255)

                        cGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTc                                                                 <  2:2947145/93‑1 (MQ=255)

                        cGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTc                                                                 <  1:1098117/93‑1 (MQ=255)

                          gtgtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTg                                                               <  2:5610605/93‑1 (MQ=255)

                          gtgtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTg                                                               <  1:1822896/93‑1 (MQ=255)

                           tgtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGt                                                              <  1:3589215/93‑1 (MQ=255)

                            gtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGtt                                                             >  1:1168316/1‑93 (MQ=255)

                            gtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGtt                                                             >  2:4230401/1‑93 (MQ=255)

                            gtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGtt                                                             >  2:5150811/1‑93 (MQ=255)

                            gtTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGtt                                                             <  2:5939752/93‑1 (MQ=255)

                             ttGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTc                                                            >  1:5033393/1‑93 (MQ=255)

                              tGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTcc                                                           >  1:2246391/1‑93 (MQ=255)

                              tGAATATTTCCGAGCAGACAGTAAAAGTACATATTAGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTcc                                                           >  1:4680487/1‑93 (MQ=255)

                                 atatTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGc                                                        >  1:6378080/1‑93 (MQ=255)

                                   atTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaa                                                      >  1:172267/1‑93 (MQ=255)

                                    tttCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac                                                     >  2:3373147/1‑93 (MQ=255)

                                    tttCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaac                                                     >  2:3972293/1‑93 (MQ=255)

                                      tCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaacaa                                                   <  2:6395996/93‑1 (MQ=255)

                                      tCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGcaacaa                                                   <  1:4442604/93‑1 (MQ=255)

                                       ccGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCaacaac                                                  >  2:4724892/1‑93 (MQ=255)

                                          aGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAcgcg                                               <  1:1312433/93‑1 (MQ=255)

                                          aGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAcgcg                                               <  2:4304658/93‑1 (MQ=255)

                                          aGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAcgcg                                               >  2:1141966/1‑93 (MQ=255)

                                           gCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgg                                              <  1:5969283/93‑1 (MQ=255)

                                           gCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgg                                              <  1:247101/93‑1 (MQ=255)

                                             aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg                                            >  2:3198576/1‑93 (MQ=255)

                                             aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg                                            >  1:3191203/1‑93 (MQ=255)

                                             aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg                                            >  1:589735/1‑93 (MQ=255)

                                             aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg                                            >  1:191325/1‑93 (MQ=255)

                                             aGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCgggg                                            >  2:2297805/1‑93 (MQ=255)

                                              gACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGc                                           <  1:3060688/93‑1 (MQ=255)

                                              gACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAAACCGGGGc                                           >  2:491921/1‑93 (MQ=255)

                                                cAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGcac                                         <  2:6659768/93‑1 (MQ=255)

                                                cAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGcac                                         >  1:2908047/1‑93 (MQ=255)

                                                 aGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGcaca                                        <  2:2639475/93‑1 (MQ=255)

                                                  gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCTTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACaa                                       <  2:332498/93‑1 (MQ=255)

                                                  gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACaa                                       >  1:393511/1‑93 (MQ=255)

                                                  gTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACaa                                       <  2:4971967/93‑1 (MQ=255)

                                                   tAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAAt                                      >  1:2767955/1‑93 (MQ=255)

                                                   tAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAAt                                      >  1:5415638/1‑93 (MQ=255)

                                                   tAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAAt                                      >  2:6375844/1‑93 (MQ=255)

                                                   tAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAAt                                      >  2:6187336/1‑93 (MQ=255)

                                                   tAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAAt                                      >  1:859397/1‑93 (MQ=255)

                                                     aaaGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaa                                    >  2:2470077/1‑93 (MQ=255)

                                                     aaaGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaa                                    >  1:3698858/1‑93 (MQ=255)

                                                      aaGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaaa                                   <  1:6513070/93‑1 (MQ=255)

                                                      aaGTACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGAGGCACAATaaa                                   <  1:3433330/93‑1 (MQ=255)

                                                        atACATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATaaaaa                                 <  2:5432317/92‑1 (MQ=255)

                                                          aCATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATa                               <  2:4775392/93‑1 (MQ=255)

                                                           cATATTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAg                              >  2:1365564/1‑93 (MQ=255)

                                                            atatTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGc                             <  2:5981193/93‑1 (MQ=255)

                                                             tactCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGcc                            >  1:1535150/4‑93 (MQ=255)

                                                              atTCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGccc                           <  1:2036204/93‑1 (MQ=255)

                                                               ttCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCg                          <  2:4425231/93‑1 (MQ=255)

                                                                tCGCAATCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGa                         <  2:2994289/93‑1 (MQ=255)

                                                                    aaTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGa                     >  2:1452682/1‑93 (MQ=255)

                                                                    aaTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGa                     >  2:4094773/1‑93 (MQ=255)

                                                                    aaTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGa                     >  2:5523931/1‑93 (MQ=255)

                                                                    aaTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATCCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGa                     >  2:521043/1‑93 (MQ=255)

                                                                     aTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGAt                    >  1:77458/1‑93 (MQ=255)

                                                                     aTCTGCTGCGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGAt                    >  1:413253/1‑93 (MQ=255)

                                                                        tgctgcGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTa                 >  2:3864408/1‑93 (MQ=255)

                                                                         gctgcGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCCACAACGCGGGGCACAATCAAAATAGCCCGATGGATTTat                >  1:783835/1‑93 (MQ=255)

                                                                         gctgcGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTat                <  1:661930/93‑1 (MQ=255)

                                                                           tgcGTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTatca              <  1:5246033/93‑1 (MQ=255)

                                                                              gTAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCg           >  2:4586901/1‑93 (MQ=255)

                                                                               tAAACTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCgg          >  2:6249427/1‑93 (MQ=255)

                                                                                aaaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCggg         >  2:3762959/1‑93 (MQ=255)

                                                                                aaaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCggg         >  2:2555732/1‑93 (MQ=255)

                                                                                 aaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc        <  1:3121990/93‑1 (MQ=255)

                                                                                 aaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc        >  1:6458282/1‑93 (MQ=255)

                                                                                 aaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc        >  1:2000288/1‑93 (MQ=255)

                                                                                 aaCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGc        >  2:2433457/1‑93 (MQ=255)

                                                                                  aCTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCt       >  1:6118998/1‑93 (MQ=255)

                                                                                   cTCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTg      >  2:5731691/1‑93 (MQ=255)

                                                                                    tCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTga     >  2:5426375/1‑93 (MQ=255)

                                                                                    tCAATGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTga     <  2:6574705/93‑1 (MQ=255)

                                                                                      aaTGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTgaga   <  1:6289351/93‑1 (MQ=255)

                                                                                       aTGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAt  >  1:5658572/1‑93 (MQ=255)

                                                                                       aTGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAt  <  2:5075974/93‑1 (MQ=255)

                                                                                       aTGCCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAt  >  2:950818/1‑93 (MQ=255)

GGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAAAAATAGCCCGATGGATTTATCATCGGGCTGAGAT  >  NC_000913/2289022‑2289201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`